CI01000001_09374272_09375120


Basic Information

Item Value
gene id CI01000001_09374272_09375120
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 9372454 ~ 9375120 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_09374272_09375120.mRNA
GATCGCTTTTGAAAAAGATGGACCTCGTGCCGGAGAGCTACTTCAGTAGCAGTAAAAATATTTTAAATCTATATTTTGTGAAAATTTCTTGGGGTTGGACCATTGTTTTGCTTCTGCCATTCATCATTTACTCCAACTCCTTCAACAAAAGCCACACATTTGTGTTGAGGCGGCTTACGTCACTACTGGTAGCAACCCTCATTTGGTACACCTGCACTGAGACTTTTTTCTACATTGAAGACCGTACAGGTTCATGTTATGAGTCAGACAATATGCAAGTCATCCATGGTGACATTACCGCAAAGACTGCATGCAAGAAGGCTGGATTCATCTGGGATGGATTTGACATATCAGGACACTCCTTCATCTTGGCTTACTCTTCTCTTGTGATTGTGGAGGAAATGGTGCCCATGTTACACATACCTGATGTTTACAGAAAAGCTCCTCTTGATTTTCTGTATATAGCACTTAATGCGATTGTGGCCATCTGGATATGGATGTTTGGATGCACTTCTGTGTATTTCCATGATCCTACTGACAAGATTCTAGGGACCTCGTGCGGGATATTAGGGTGGTACATGACCTATGTTGTTTGGTACCCATTTCGCTTTTCTCCAGGTCTCCCTCCACAGCAGAAACAACACGCTTAGTATGAGAACTAAATGGTACAAGTGCACTACAACAAGCTTCACATATCTTCAATGTTTGTTTTGTGAGATGCATGATGGGTTAGCCGTCCATGTGGGGCAGAAGGCAGCTGGTGTTCCTAAAATGACAATCTGTAATCTGAGAAGTCCCATCTGAACCTTATTGTTGCCTTCAAAAGTTTTGTGGCTTTATACAGAGCTGGAATAATGAACTTGACAGTAAATTTAGCTTGTACATTAGTCTGCTGCTACATTCTGTAATTAACCTGTCCTGTAATCATAAGCTGAGCTGCCTTTTAACAGTAAATATATAGACTTTTTCCCCTTGACACTAGTTTTGATATTTTTATTGCGCTATTTATTGATTAATTAGGAGGTCAAAGAATTATAGCGCAATGCATTTGTGTTATTTTCTTGCATTGTGTTTAATAGGACCATTTTATGTGTTCTAGCTGCCTGAAGGCCAAACTGTTGTTCGTTCAAATGTGCCATTGTTAGATTCATCATTCGCAGTTGTCGTCATTCCTCATATCACTGATGAATGTTAAAAATCTAATCAGTTTATTACAGAAAAATAGACACTGTCTGTTCTTGGAAACCAAAAACGATCTAAAATGTACTGTTTGGAATATTGTTAGAATGTCTGGGGACTGGATTGTTGTTTGAGTGATACATTTAAATTAATATTTATCTGGTTATAAGTATTTTTTGCAGGTTTGAGGAACAATGCAAATTTTCTAAAATACAAATGATGGAACATGCTGGTTATGGAGGGCACATCCATTAGTCATTTCATGCTTGTCAGTTAAAGGGTTAGTTCACCCAAAAATGAAAATAATATCATTTATTACTCACCCTCATGCCGTTCCACGCCCGTAAGACCTTCATTAATCTTTGGAACACAAATTGAGATATTTTTATTGAAATCCAATGGCTCCGTGAGGCCTACATAGGGAGCAATGACATTTCCTCTCTCAAGATCCATAAAGGTACTAAAAACATATTTAAATCAGTTCATGTGAGTACAGTGGTTCAATATTAATATTATAAAGCGATGAGAATGTTTTTGGTGCACCAAAAAAGAAACAAAACAAAATAATGACTTATTTAGTGATGGCCGATTTCAAAACACTGCTTCAGGAAGCTTCGAAGCATAATGAATCAGCGTGTCGAATCATGATTCGGATCGTGTGTCAAACCGCCAAACTGCTGAAATCACGTGACTTTGGCGCTCCGAACCGCTGATTCATAACGCTCCGAAGCTTCCTGAAGCAGTGTTTTGAAATCGACCATCACTATATAAGTCGTTATTTTGTTTTTTTTTGGCACACCAAAAATATTCTCATCGCTTTATAATATTAATATTGAACCACTGTACTCACATGAACTGATTTAAATATGTTTTTAGTACCTTTATGGATCTTGAGAGAGGAAATGTCATTAGGCCTCACTGAGCCATCGGATTTCAACAAAAATATCTCAATTTGCGTTCCGAAGATTAACGAAGGTCTTACGGGTATGGAACGGCATGAGGGTGAGTAATAAATAACATTATTTTCATTTTTGGGTGAACTAACCCTTTAAAACATTTTGGTGATCATCACTGCAATAATGCTTTTTGTAATATCAGTATTTCAAAGAAAGCAAACCGGACATGTTATTATTGTGTTGAGTTATTGTACTGTACCCATTTCAACTAATGTGATGACGTGGACATCTTGTTAGTGTAACAACATATCACTTTTATTTAATTCATTGTGGTGTTTGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_09374272_09375120.mRNA False 2420 mRNA 0.37 2 9372502 9375120

Neighbor

gene id symbol gene type direction distance location
CI01000001_09367413_09370794 NA coding downstream 1708 9366485 ~ 9370794 (-)
CI01000001_09356265_09365557 SENP1 coding downstream 6234 9355167 ~ 9366268 (-)
CI01000001_09322428_09325859 NA coding downstream 46525 9322130 ~ 9325977 (-)
CI01000001_09270954_09281725 NA coding downstream 89991 9269702 ~ 9282511 (-)
CI01000001_09228393_09265951 LRP1AB, LRP1 coding downstream 106404 9228366 ~ 9266098 (-)
CI01000001_09437154_09437438 NA coding upstream 61890 9437010 ~ 9437438 (-)
CI01000001_09439380_09449840 ADA coding upstream 64117 9439237 ~ 9449840 (-)
CI01000001_09524946_09530660 GDI1, GDI1.S coding upstream 149221 9524341 ~ 9530660 (-)
CI01000001_09540982_09554063 NA coding upstream 165369 9540489 ~ 9554367 (-)
CI01000001_09554847_09556502 RCA2.2 coding upstream 179466 9554586 ~ 9556502 (-)
G18698 NA non-coding downstream 17451 9354146 ~ 9355051 (-)
G18700 NA non-coding downstream 52366 9319463 ~ 9320136 (-)
G18508 NA non-coding downstream 152575 9207983 ~ 9219927 (-)
G18646 NA non-coding downstream 228811 9143103 ~ 9143691 (-)
G18645 NA non-coding downstream 229619 9142615 ~ 9142883 (-)
G18694 NA non-coding upstream 25730 9400850 ~ 9407239 (-)
G18771 NA non-coding upstream 135872 9510992 ~ 9511210 (-)
G18772 NA non-coding upstream 137329 9512449 ~ 9512739 (-)
G18773 NA non-coding upstream 139311 9514431 ~ 9514675 (-)
G18774 NA non-coding upstream 145012 9520132 ~ 9520415 (-)
G18223 NA other downstream 1443985 7926104 ~ 7928517 (-)
G18023 NA other downstream 1614982 7756501 ~ 7757520 (-)
G17911 NA other downstream 2119248 7251311 ~ 7267952 (-)
CI01000001_06932075_06937182 NA other downstream 2435279 6931621 ~ 6937231 (-)
G17789 NA other downstream 2482088 6837525 ~ 6890414 (-)
CI01000001_09804494_09811219 NA other upstream 434537 9804429 ~ 9811219 (-)
G20136 NA other upstream 1163907 10539027 ~ 10539850 (-)
CI01000001_10862471_10864514 NA other upstream 1487105 10862225 ~ 10865770 (-)
G20230 NA other upstream 1647007 11022127 ~ 11028777 (-)
G20319 NA other upstream 1735717 11110837 ~ 11114747 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_022381 fitm2 coding NC_007134.7 CM002907.2 25796348 ~ 25798099 (-)