CI01000001_09367413_09370794



Basic Information


Item Value
gene id CI01000001_09367413_09370794
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 9366485 ~ 9370794 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000001_09367413_09370794.mRNA
CTTTCAGTAGCAACAAACAAGTCAGACAATGGCCTGGATGTTCAGCCGGTGGCCTCAGATCCTCCAAGTTATCATGAGGCAACTACTGGTGGCAGCCCTTGTTATAGTGGAACTTATCCCGAAGATGGTGAGATGCTCACAGAATTCAGCTGGGATGACCGAAGGATCAGGAGGATATTCATCCGCAAGGTGTACACCATCCTGATGCTCCAGCTTTCTGTCACATTTTCCTTTGTGGCTCTTTTCGTTTTCTGTAAACCCGTGAAAGATTACATTCATACCAACCCTGGCTGGTACTGGGCATCATATGCAGTGTTTTTTGTCACATATCTGACCCTGTCCTGCTGCCGTGGACCCCGGAGGCAGTTCCCATGGAATCTGATTCTGCTCACAATCTTTACTCTGTCTCTTTCTTACATGACAGGAACGTTGTCCAGCTACTACAATACTTCATCTGTCATCATCTGCCTGGGTATTACCATCTTGGTCTGTCTTGCAATTACAATCTTTAGCTTCCAAACCAAGATTGATATTACTTCATACCAAGGTGTGCTGGTGGTCTTCTGCACAGTAGTGTTTATTTGTGGACTTGCCCTGGCATTCATCCTGCCCTTTGGATATGTTCCATGGTTGCACGTTGTGTATGCTGTCTTGGGAGCAATACTGTTTTGCATGTTCCTGGCATTTGACACACAGATGCTGATGGGAAGCAAGCGATACACCATAAGTCCTGAGGAATACATCTTTGCCACCCTCAGCATATACCTGGACATTGTTTACATCTTCTCTTTCTTTCTCCAGTTGTTTGGTACTCCTGAACGGCAGTGAAAGTGCTGTTTAACCTGAAGCTCTTATGGCTCTCCTGAGTGTCTTTTGTTCCCCTGGTCTGAGTGATCCTGTCCTCTCCAGCATGATGTGGATATTCAGTGCACGCTGTTTAGTTTCCTCTCCTCAGATATTACCATGTGTCATGTGTTTATCCTGTAGCAGAAAGGATATACATAACATATGTACACTGGTACCACTTTAACAACATCCATCTAGTTTTACACATGGTGCCATAGAAAACAAAATAGAAAATATTAAATACATTTGTGAAACCTATATGATGTCATTAGCAGTGAAAGTGCATGTAATATTTGCTCAGACTCAGATATGAGCAGAAGCAGCATCACATTGAGGTGTGTATTTATCCATCTATTCCCTCTTTGTGTATGACTCTGCAAAAGTTTCATAATGTGATATCACAGCATGAGGACATTTTAACAAATCATTCCAAGAAACTATATATGGAGGTGAATATTTAACATATGGAGGTGAACGGCTGGCTGGATTTGAGGAGTGCACATATGAATGGAATGAACATTACTGATTTAATTTGCAAAAAACATATTTTTATACGTTATAAATTTTTCATTGGGCAAATTTCACTGCCATTTTAAAGTCACTGACTTGTTTGAGATGTGCTTTGTTGAGCATTATTTATTTTATTTAGCCCAATATGTATTATTAATTCATTCATTACACAGAATTTTAATGTATTATCATAGTACATATCTATTTTTGAAGAAAATGAATTATTTTGAATGACTTTGGATGTGTACATTGATTCACAGTGTTCACAAAAAAGAGTGCAAAATCACTGTAGTTGCGTTTAAATAGAATGCAGTGCTACATATAATTTTTCATGTTTGTGGTCTTTACAGTAGAGATGTATGTTGTAAAAAAAAGAAAAGGTTTATCAAGAGTAAATAAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000001_09367413_09370794.mRNA True 1756 mRNA 0.39 11 9366485 9370794

Neighbor


gene id symbol gene type direction distance location
CI01000001_09356265_09365557 SENP1 coding downstream 217 9355167 ~ 9366268 (-)
CI01000001_09322428_09325859 NA coding downstream 40508 9322130 ~ 9325977 (-)
CI01000001_09270954_09281725 NA coding downstream 83974 9269702 ~ 9282511 (-)
CI01000001_09228393_09265951 LRP1AB, LRP1 coding downstream 100387 9228366 ~ 9266098 (-)
CI01000001_09213449_09223894 LRP1AB, LRP1 coding downstream 142135 9213431 ~ 9224350 (-)
CI01000001_09374272_09375120 NA coding upstream 1708 9372454 ~ 9375120 (-)
CI01000001_09437154_09437438 NA coding upstream 66216 9437010 ~ 9437438 (-)
CI01000001_09439380_09449840 ADA coding upstream 68443 9439237 ~ 9449840 (-)
CI01000001_09524946_09530660 GDI1, GDI1.S coding upstream 153547 9524341 ~ 9530660 (-)
CI01000001_09540982_09554063 NA coding upstream 169695 9540489 ~ 9554367 (-)
G18698 NA non-coding downstream 11434 9354146 ~ 9355051 (-)
G18700 NA non-coding downstream 46349 9319463 ~ 9320136 (-)
G18508 NA non-coding downstream 146558 9207983 ~ 9219927 (-)
G18646 NA non-coding downstream 222794 9143103 ~ 9143691 (-)
G18645 NA non-coding downstream 223602 9142615 ~ 9142883 (-)
G18694 NA non-coding upstream 30056 9400850 ~ 9407239 (-)
G18771 NA non-coding upstream 140198 9510992 ~ 9511210 (-)
G18772 NA non-coding upstream 141655 9512449 ~ 9512739 (-)
G18773 NA non-coding upstream 143637 9514431 ~ 9514675 (-)
G18223 NA other downstream 1437968 7926104 ~ 7928517 (-)
G18023 NA other downstream 1608965 7756501 ~ 7757520 (-)
G17911 NA other downstream 2113231 7251311 ~ 7267952 (-)
CI01000001_06932075_06937182 NA other downstream 2429262 6931621 ~ 6937231 (-)
G17789 NA other downstream 2476071 6837525 ~ 6890414 (-)
CI01000001_09804494_09811219 NA other upstream 438863 9804429 ~ 9811219 (-)
G20136 NA other upstream 1168233 10539027 ~ 10539850 (-)
CI01000001_10862471_10864514 NA other upstream 1491431 10862225 ~ 10865770 (-)
G20230 NA other upstream 1651333 11022127 ~ 11028777 (-)
G20319 NA other upstream 1740043 11110837 ~ 11114747 (-)

Expression



Co-expression Network