G145708 (LOC107667428,LOC107756812,LOC107590098,LOC107673825)


Basic Information

Item Value
gene id G145708
gene name LOC107667428,LOC107756812,LOC107590098,LOC107673825
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 11532458 ~ 11535546 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU215255
ATAGACCTAAATGTAGAGCATTATGCTTGTATTTTTAGACTGAATGCAGTTTTCATGAAACTTTTAGATTCATGTTAGCTGGTTTTTAAGTAGTAAGTACAAGCAATCCAGACCAAATCGCGGTTTAggaataaaaaagtttttcccaacacaaaaaaaacgaaatttAAGACTACTAAAACAATCATTATGGTCCACTGTAAAGGAagtaattcaaatgcaaaaagtacaaatgcaaatgttttattttcatagaaTTTCCAAAGAACCTCCTTCCACAGGTGTCTCAGTGTGACTTTGCTAGTTGAAGCTCATATCCACACTGATTTAGCACATTCAGAAGAGATTCTACACcaagaaaaaaatggtttcaacGGCTGCTTTAGCTTTCGTAATattcaaaaaagaaatcaaCCTCTGCGATGAGTCTTGCAATGGATTTTCACACAACGCAATGATGAAGCCACTTCCTCGAAGAAATGTTCTTGTTTTGATACACCCAAACTGCTGAGTCATGACAGTATTTTACATGTGTAATATGTTTCACAGttttaaaagacttaaaaaaaacaacaaaaaaaccccaatatATATTACGCTTTCATCTGTTTTCACTTGCTGagttgaatttaaattaatgaaataataataaaaacccaGACAATCAATAATCTCTTACATATTATACAAAATGATTGGCTCATGTTCAGTTTTTCGATCAATGTATCAGCCCCTGTGATTGTCATATATTGCGAACAGAAGAGGACAGACGGTGTGAGCTGATGATTAACACATCCAATGAAGGCCAATTCGAAAGCTCAGCCTCACACGGCGCGATTAAAATCTTAATACAGAACACTGCATCAACGTACACCAAGAAATTTCATGAGGAACCAGACTGAAAGTGTCAAGACGCTGACGTTCCTTTTGAGTATGTTCCAGTGTAGTTTCACAAACACGTATGGGAGCAAGTGATGCTGTTTTATTGAGTACTGCGGCATGAGAGTGCGGTGAACTGATCGTGTTTTTCTGTGATGGTTTGATATGCAGTCATGAAAAACCAAAGCAGTGAGCCATCACACTATCATCACATGAATGTCCGCCACTCACAGCCAGTCCGAAAtgactaaaaaatatttaccacTTTCTATAAAGTCAAAAGGTCACTACAAAATCATTGTTCACAAGTGCTTTTTTTCGATATTGGGTCATAGTGTTCTTGCTGCTGGCTGTTGGTACTCCATTTTTGGGAAACGTCTCTGCAGCGTTCTGTTGTTTCTCTCCGTAGGAGATGGTGTGGCATCAGCGACGGCTAAACTCTGTTACCTCCTGCCCATCTCGTTCTGTTTGAGGAACTGGATGTTAGCGCTGCTGTCTGCCAGTTCAGGGTACTGCTCTACTGGGAGCACGTAGTAGCCCTCGTAGCCTGCGACCTTCCCCATGGCTAACAGTtgttgcttttcattttcagcccACACGCGTCCCCCTTCCCTGCCTTCGCGCGCTTGCTGTTGCTCCCTGGCCCAGGCTCCAGACAGCGCCCTCTGGTGAGCTTGTTCCAACAGGCGGCTCCGCTCCTTTTCCAGAACCTCTGTTGACAGCCCGTAGCGGATGCTGTATGTGAGTTTGGCGGAGTGGATTTCCAAAGTGACGCCCCGACGGGATCGCCCGCTGACGGTCACGTTGATCCCGCTCTCCAGCGTTTTATGGCCGCTGCTGAGACCCAGGGCCAAAAGGTCGCTGTCAGCCAGTCCAAGCTTCACGAAGAAGTGGCAGTCCCGTCCATCGATGGTGTAATGCGTGCCGTCCAGATAGATGGCGTTGTTGAGAATCTGTGATATTTTGCGACTGTCTTCGCTGGCTGAGCTGGACAGGTCTGTTAATATGTGACCATCCTTGATAGCGATCATCATTCCTTTGCCTATGATGGGAGTGCTGGTGCCAAACCAGTAACCGGGCTTGTCGCGCTTGGTGCGCCGCTGTTTGTTGAGCCGCCTCCCCTCAAGAACCATAAAGGCCTGATTGTGTCTGTCCACTGAATGCTGGACTCCTGTGAAAACTGAATACTGTCAGAGTCTTGACTGGCAACTATCTCGTAAGGagggtcaacaaaataaagTGAGTGTCTTGGAAACCCTGGAATGATATTGCTTAGCTGGAAGCCAAACATAA

Function

NR:

description
PREDICTED: teneurin-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU215255 True 2172 lncRNA 0.44 2 11532458 11535546

Neighbor

gene id symbol gene type direction distance location
ca4c LOC107590125,LOC107756797,LOC107673808,LOC107749941,LOC107667426,LOC107570806 coding downstream 385764 11139986 ~ 11146694 (-)
LOC122326577 crcp,LOC107673842,LOC107667441 coding downstream 401292 11128381 ~ 11131166 (-)
tpst1l tpst1l,tpst1,LOC107590047,LOC107673841,LOC107710537,LOC107667440,LOC107570812 coding downstream 404702 11122303 ~ 11127756 (-)
trnae-cuc_39 NA coding downstream 410784 11121603 ~ 11121674 (-)
zgc:152891 zgc:152891,LOC107673846,LOC107710536,LOC107590050 coding downstream 411108 11113370 ~ 11121350 (-)
zgc:165573 NA coding upstream 1332 11536878 ~ 11540005 (-)
mat2b LOC107590055,LOC107756808,LOC107673835,LOC107749920,LOC107570697,LOC107667431 coding upstream 5046 11540592 ~ 11546244 (-)
trnav-aac_28 NA coding upstream 11413 11546959 ~ 11547031 (-)
trnav-cac_11 NA coding upstream 11905 11547451 ~ 11547523 (-)
LOC122326002 LOC107673834,LOC107756807,LOC107590054,LOC107570695,LOC101886266,LOC107667430 coding upstream 12441 11547987 ~ 11626108 (-)
G145666 NA non-coding downstream 395927 11135914 ~ 11136531 (-)
G145657 NA non-coding downstream 425092 11105913 ~ 11107366 (-)
G145559 NA non-coding downstream 604971 10923433 ~ 10927487 (-)
G145549 NA non-coding downstream 641306 10885344 ~ 10891152 (-)
G145527 NA non-coding downstream 702932 10827775 ~ 10829526 (-)
G145781 adra2db,LOC107566213,LOC107667592,LOC107756796,LOC107590063,LOC107689214,LOC107749943 non-coding upstream 459002 11994548 ~ 11998276 (-)
G145821 NA non-coding upstream 599801 12135347 ~ 12149436 (-)
G145831 NA non-coding upstream 616257 12151803 ~ 12154754 (-)
G145829 LOC107590069,LOC107689193 non-coding upstream 619784 12155330 ~ 12157944 (-)
G145835 NA non-coding upstream 641757 12177303 ~ 12179045 (-)
si:dkey-22f5.9 si:dkey-22f5.9 other downstream 584090 10911230 ~ 10948368 (-)
LOC122326213 NA other downstream 675030 10854666 ~ 10857428 (-)
prob1 LOC107673843,LOC107590111,LOC107733495,LOC107715308,LOC107557040 other downstream 815298 10711570 ~ 10717160 (-)
LOC122326060 gria3,LOC107548214,LOC107559424,LOC107700029,LOC107715357,LOC107669376,LOC107568987,LOC106603380 other downstream 1399623 10107731 ~ 10132835 (-)
aipl1 aipl1,LOC107664920,LOC107585578,LOC107743670 other downstream 1521531 9882417 ~ 10010927 (-)
LOC122326065 clk4b,LOC107673840,LOC107756806,LOC107667599,LOC107570696,LOC107749918 other upstream 271278 11806824 ~ 11812583 (-)
cnot6a cnot6a,LOC107756798,LOC107689185,LOC107590062,LOC107566218,LOC107749911,LOC108441023,LOC107667594 other upstream 436670 11972216 ~ 11985072 (-)
rgs14b LOC107721394,LOC107590127,LOC107689186,LOC107748103,LOC107588771 other upstream 476665 12012211 ~ 12057607 (-)
LOC122326615 LOC101885612 other upstream 623126 12158672 ~ 12161667 (-)
G145910 NA other upstream 839300 12374846 ~ 12375545 (-)

Expression


Co-expression Network