mat2b (LOC107590055,LOC107756808,LOC107673835,LOC107749920,LOC107570697,LOC107667431)


Basic Information

Item Value
gene id mat2b
gene name LOC107590055,LOC107756808,LOC107673835,LOC107749920,LOC107570697,LOC107667431
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 11540592 ~ 11546244 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043222022.1
TTTGTGGCATATGGTTTGTTCAaacaatgtttatattatacaaaTCTGCGTTTCAATGCGAAAACGAAATATAGACGATTTCAAGCTGTTTGAAAACGTTTCGTGCTATTAGCTTTGTGTCGGCTGctttggctttattttaaggGACTCCTTCGCATTCTGCCGTTAAtctattttaaagttttgttcCTACGGAGTGTCTCGGCATTTTGTAATTTCCTATTACATAATTACTTGCGAGTATGCCGACGTTTGATATTGATGGTAGTCTTTGATGCTGGGGCATAAAACGGCTGACGTGAACTAAAGCGAAACTCAGCCGCATAGGAACTGCGCAGAAGTACGCAGCTATGATGCGCTAGAACACTTCTCTTTGTTTTGGTCTAAAGCCGCTGTTTACACTGCGAGGATGGCGTAGAGATTCACTAATCTCCAGAACATAAACAGGCGTTAGCGTTACGTGCGTATGTTCTATGAATCATATCGCACACGGGCCTAATTTGACAGCACGAGCCACCCGTTCCAAGAGGGTTTAAGGATTGAGTGGCGCATCAGAAATAGAGGTTTCTCCTCCAGGATATGATAACAGTAGTCACACTGAAATGAGTATCAGAGATAAAGAGCTTAAGATACATTTCAAACCCGGGCACGTTGAGCTTGTTCAGGATGAAGTCTACACTCCTTACCGGCGCGTGCTTGTGACTGGTGCCACGGGGCTCCTGGGCCGTGCTGTTTACAAAGAGTTCAAGAACAATGATTGGGATGCTTTGGGGTGCGGCTACAACCGCGCACGGCCTTGTTTTCTGAAGTGTAATCTCCTGGATGAAGACGCAGTGCGAGGGGTCATTCAAGGGTTTCAGCCTCATGTCATTGTGCACTGTGCTGCTGAGAGGAGGCCAGATGTTGTGGAGCGTCATACTGAAGCAGCCATGAACCTGAATGTGCATGCATGTTCTACTCTGGCCAAAGAAGCAGTGGGCATCTTCCTCATTTACATCAGCACAGATTACGTTTTTGATGGGCGCAATCCACCCTATGGAGAAAACGATGCCCCCAATCCTTTGAATTTGTATGGGAAGTCCAAGCTAGAGGGTGAAAGGGAGATTCTCAGACACTGCCCAGCAGGTGCAGCTGTACTACGAGTGCCCATTCTGTTTGGAGAGGTGGAGAAGGTTGAAGAGAGTGCAGTGACCGTGTTGTGGGACCGTGTTCAGGAGGGAGCCGAGAGCTGCACCATAGACCACTGTCAGCAACGCTTTCCCACTTACACTAATGACGTGGCACGTGTCTGCCGGAACATGGCCGAGAGAGCCCTTCAGGACCCGTCACTGCGTGGAATCTTCCATTATTCTGCCAAAGAGCAGATGACCAAATATGAGATGGCCTGTGCAATAGCAGATGCTTTCAACCTGCCCAGCAGTCATCTAATACCAATGACAGATCAGCCTACAGGAGCAGGTGCCCAAAGGCCTCAAAATGCACAGTTAGAGTGCTCACGTCTGGAGCTCCTTGGTCTGAGTGCAGAACCCACTCCTTTCAAGACTGCCATCCGGGACAGCCTCTGGCCCTTCCAGCATGACAAACGATGGAGGCAGACTGTCTTTCATTAAGGCGACAACTATACCCCAAACTCCAGAAGAAAACAGGACCGCACTCTTTAAATGTTTAGCGTTTCAATATTTCGCTGAAGTACCAATCCTGTTTCACCGTCTTGAATTAAAACAGTTCCGCGCTTTTTACAAGTTCTGCAGCTTTGTTTGATGTTCAAGTACACATTTATTATAGCCAGCCGGTGTTTCacctttaagtgtttttgtgcGAAATGCACTGTGGGTTACAGAGTCAAGCCTTGactgtattttgtgtttatttcctAACTGTATTACTTTATGTAAATGACAAATTGAAGACATAAATGTTTGATAAAAAGAACAGAAGATATCCTAAGTTTCTGATGTTCCctcttttttcctttaaaaaaaaatctggtatTTACTTGAGgacaaaacaatgcaatatgAATAAAGCACCAGAAAggttaataaaatcaaaccttta
>XM_043222023.1
CATTATATTTTGTGGCATATGGTTTGTTCAaacaatgtttatattatacaaaTCTGCGTTTCAATGCGAAAACGAAATATAGACGATTTCAAGCTGTTTGAAAACGTTTCGTGCTATTAGCTTTGTGTCGGCTGctttggctttattttaaggGACTCCTTCGCATTCTGCCGTTAAtctattttaaagttttgttcCTACGGAGTGTCTCGGCATTTTGTAATTTCCTATTACATAATTACTTGCGAGTATGCCGACGTTTGATATTGATGGTAGTCTTTGATGCTGGGGCATAAAACGGCTGACGTGAACTAAAGCGAAACTCAGCCGCATAGGAACTGCGCAGAAGTACGCAGCTATGATGCGCTAGAACACTTCTCTTTGTTTTGGTCTAAAGCCGCTGTTTACACTGCGAGGATGGCGTAGAGATTCACTAATCTCCAGAACATAAACAGGCGTTAGCGTTACGTGCGTATGTTCTATGAATCATATCGCACACGGGCCTAATTTGACAGCACGAGCCACCCGTTCCAAGAGGGTTTAAGGATTGAGTGGCGCATCAGAAATAGAGGTTTCTCCTCCAGGATATGATAACAGTAGTCACACTGAAATGAGTATCAGAGATAAAGAGCTTAAGATACATTTCAAACCCGGGCACGTTGAGCTTGTTCAGGATGAAGTCTACACTCCTTACCGGCGCGTGCTTGTGACTGGTGCCACGGGGCTCCTGGGCCGTGCTGTTTACAAAGAGTTCAAGAACAATGATTGGGATGCTTTGGGGTGCGGCTACAACCGCGCACGGCCTTGTTTTCTGAAGTGTAATCTCCTGGATGAAGACGCAGTGCGAGGGGTCATTCAAGGGTTTCAGCCTCATGTCATTGTGCACTGTGCTGCTGAGAGGAGGCCAGATGTTGTGGAGCGTCATACTGAAGCAGCCATGAACCTGAATGTGCATGCATGTTCTACTCTGGCCAAAGAAGCAGTGGGCATCTTCCTCATTTACATCAGCACAGATTACGTTTTTGATGGGCGCAATCCACCCTATGGAGAAAACGATGCCCCCAATCCTTTGAATTTGTATGGGAAGTCCAAGCTAGAGGGTGAAAGGGAGATTCTCAGACACTGCCCAGGTGCAGCTGTACTACGAGTGCCCATTCTGTTTGGAGAGGTGGAGAAGGTTGAAGAGAGTGCAGTGACCGTGTTGTGGGACCGTGTTCAGGAGGGAGCCGAGAGCTGCACCATAGACCACTGTCAGCAACGCTTTCCCACTTACACTAATGACGTGGCACGTGTCTGCCGGAACATGGCCGAGAGAGCCCTTCAGGACCCGTCACTGCGTGGAATCTTCCATTATTCTGCCAAAGAGCAGATGACCAAATATGAGATGGCCTGTGCAATAGCAGATGCTTTCAACCTGCCCAGCAGTCATCTAATACCAATGACAGATCAGCCTACAGGAGCAGGTGCCCAAAGGCCTCAAAATGCACAGTTAGAGTGCTCACGTCTGGAGCTCCTTGGTCTGAGTGCAGAACCCACTCCTTTCAAGACTGCCATCCGGGACAGCCTCTGGCCCTTCCAGCATGACAAACGATGGAGGCAGACTGTCTTTCATTAAGGCGACAACTATACCCCAAACTCCAGAAGAAAACAGGACCGCACTCTTTAAATGTTTAGCGTTTCAATATTTCGCTGAAGTACCAATCCTGTTTCACCGTCTTGAATTAAAACAGTTCCGCGCTTTTTACAAGTTCTGCAGCTTTGTTTGATGTTCAAGTACACATTTATTATAGCCAGCCGGTGTTTCacctttaagtgtttttgtgcGAAATGCACTGTGGGTTACAGAGTCAAGCCTTGactgtattttgtgtttatttcctAACTGTATTACTTTATGTAAATGACAAATTGAAGACATAAATGTTTGATAAAAAGAACAGAAGATATCCTAAGTTTCTGATGTTCCctcttttttcctttaaaaaaaaatctggtatTTACTTGAGgacaaaacaatgcaatatgAATAAAGCACCAGAAAggttaataaaatcaaaccttta
>XM_043222024.1
ACTGCAAATCAAGgacttcaaaaatacattttcatgctAAAGGCTTCCTACTACACCTGCATCTAAATATGCCTGGCTTTAACTACGGGGATGATCAGGATGAAGTCTACACTCCTTACCGGCGCGTGCTTGTGACTGGTGCCACGGGGCTCCTGGGCCGTGCTGTTTACAAAGAGTTCAAGAACAATGATTGGGATGCTTTGGGGTGCGGCTACAACCGCGCACGGCCTTGTTTTCTGAAGTGTAATCTCCTGGATGAAGACGCAGTGCGAGGGGTCATTCAAGGGTTTCAGCCTCATGTCATTGTGCACTGTGCTGCTGAGAGGAGGCCAGATGTTGTGGAGCGTCATACTGAAGCAGCCATGAACCTGAATGTGCATGCATGTTCTACTCTGGCCAAAGAAGCAGTGGGCATCTTCCTCATTTACATCAGCACAGATTACGTTTTTGATGGGCGCAATCCACCCTATGGAGAAAACGATGCCCCCAATCCTTTGAATTTGTATGGGAAGTCCAAGCTAGAGGGTGAAAGGGAGATTCTCAGACACTGCCCAGCAGGTGCAGCTGTACTACGAGTGCCCATTCTGTTTGGAGAGGTGGAGAAGGTTGAAGAGAGTGCAGTGACCGTGTTGTGGGACCGTGTTCAGGAGGGAGCCGAGAGCTGCACCATAGACCACTGTCAGCAACGCTTTCCCACTTACACTAATGACGTGGCACGTGTCTGCCGGAACATGGCCGAGAGAGCCCTTCAGGACCCGTCACTGCGTGGAATCTTCCATTATTCTGCCAAAGAGCAGATGACCAAATATGAGATGGCCTGTGCAATAGCAGATGCTTTCAACCTGCCCAGCAGTCATCTAATACCAATGACAGATCAGCCTACAGGAGCAGGTGCCCAAAGGCCTCAAAATGCACAGTTAGAGTGCTCACGTCTGGAGCTCCTTGGTCTGAGTGCAGAACCCACTCCTTTCAAGACTGCCATCCGGGACAGCCTCTGGCCCTTCCAGCATGACAAACGATGGAGGCAGACTGTCTTTCATTAAGGCGACAACTATACCCCAAACTCCAGAAGAAAACAGGACCGCACTCTTTAAATGTTTAGCGTTTCAATATTTCGCTGAAGTACCAATCCTGTTTCACCGTCTTGAATTAAAACAGTTCCGCGCTTTTTACAAGTTCTGCAGCTTTGTTTGATGTTCAAGTACACATTTATTATAGCCAGCCGGTGTTTCacctttaagtgtttttgtgcGAAATGCACTGTGGGTTACAGAGTCAAGCCTTGactgtattttgtgtttatttcctAACTGTATTACTTTATGTAAATGACAAATTGAAGACATAAATGTTTGATAAAAAGAACAGAAGATATCCTAAGTTTCTGATGTTCCctcttttttcctttaaaaaaaaatctggtatTTACTTGAGgacaaaacaatgcaatatgAATAAAGCACCAGAAAggttaataaaatcaaaccttta
>XM_043222025.1
ACTGCAAATCAAGgacttcaaaaatacattttcatgctAAAGGCTTCCTACTACACCTGCATCTAAATATGCCTGGCTTTAACTACGGGGATGATCAGGATGAAGTCTACACTCCTTACCGGCGCGTGCTTGTGACTGGTGCCACGGGGCTCCTGGGCCGTGCTGTTTACAAAGAGTTCAAGAACAATGATTGGGATGCTTTGGGGTGCGGCTACAACCGCGCACGGCCTTGTTTTCTGAAGTGTAATCTCCTGGATGAAGACGCAGTGCGAGGGGTCATTCAAGGGTTTCAGCCTCATGTCATTGTGCACTGTGCTGCTGAGAGGAGGCCAGATGTTGTGGAGCGTCATACTGAAGCAGCCATGAACCTGAATGTGCATGCATGTTCTACTCTGGCCAAAGAAGCAGTGGGCATCTTCCTCATTTACATCAGCACAGATTACGTTTTTGATGGGCGCAATCCACCCTATGGAGAAAACGATGCCCCCAATCCTTTGAATTTGTATGGGAAGTCCAAGCTAGAGGGTGAAAGGGAGATTCTCAGACACTGCCCAGGTGCAGCTGTACTACGAGTGCCCATTCTGTTTGGAGAGGTGGAGAAGGTTGAAGAGAGTGCAGTGACCGTGTTGTGGGACCGTGTTCAGGAGGGAGCCGAGAGCTGCACCATAGACCACTGTCAGCAACGCTTTCCCACTTACACTAATGACGTGGCACGTGTCTGCCGGAACATGGCCGAGAGAGCCCTTCAGGACCCGTCACTGCGTGGAATCTTCCATTATTCTGCCAAAGAGCAGATGACCAAATATGAGATGGCCTGTGCAATAGCAGATGCTTTCAACCTGCCCAGCAGTCATCTAATACCAATGACAGATCAGCCTACAGGAGCAGGTGCCCAAAGGCCTCAAAATGCACAGTTAGAGTGCTCACGTCTGGAGCTCCTTGGTCTGAGTGCAGAACCCACTCCTTTCAAGACTGCCATCCGGGACAGCCTCTGGCCCTTCCAGCATGACAAACGATGGAGGCAGACTGTCTTTCATTAAGGCGACAACTATACCCCAAACTCCAGAAGAAAACAGGACCGCACTCTTTAAATGTTTAGCGTTTCAATATTTCGCTGAAGTACCAATCCTGTTTCACCGTCTTGAATTAAAACAGTTCCGCGCTTTTTACAAGTTCTGCAGCTTTGTTTGATGTTCAAGTACACATTTATTATAGCCAGCCGGTGTTTCacctttaagtgtttttgtgcGAAATGCACTGTGGGTTACAGAGTCAAGCCTTGactgtattttgtgtttatttcctAACTGTATTACTTTATGTAAATGACAAATTGAAGACATAAATGTTTGATAAAAAGAACAGAAGATATCCTAAGTTTCTGATGTTCCctcttttttcctttaaaaaaaaatctggtatTTACTTGAGgacaaaacaatgcaatatgAATAAAGCACCAGAAAggttaataaaatcaaaccttta

Function

NR:

description
methionine adenosyltransferase 2 subunit beta isoform X2

GO:

id name namespace
GO:0006730 one-carbon metabolic process biological_process
GO:0045226 extracellular polysaccharide biosynthetic process biological_process
GO:0006556 S-adenosylmethionine biosynthetic process biological_process
GO:0008831 dTDP-4-dehydrorhamnose reductase activity molecular_function

KEGG:

id description
K00789 metK; S-adenosylmethionine synthetase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043222022.1 False 2058 mRNA 0.45 7 11540592 11546032
XM_043222023.1 True 2063 mRNA 0.45 7 11540592 11546040
XM_043222024.1 False 1491 mRNA 0.46 7 11540592 11546244
XM_043222025.1 False 1488 mRNA 0.46 7 11540592 11546244

Neighbor

gene id symbol gene type direction distance location
zgc:165573 NA coding downstream 587 11536878 ~ 11540005 (-)
ca4c LOC107590125,LOC107756797,LOC107673808,LOC107749941,LOC107667426,LOC107570806 coding downstream 393898 11139986 ~ 11146694 (-)
LOC122326577 crcp,LOC107673842,LOC107667441 coding downstream 409426 11128381 ~ 11131166 (-)
tpst1l tpst1l,tpst1,LOC107590047,LOC107673841,LOC107710537,LOC107667440,LOC107570812 coding downstream 412836 11122303 ~ 11127756 (-)
trnae-cuc_39 NA coding downstream 418918 11121603 ~ 11121674 (-)
trnav-aac_28 NA coding upstream 715 11546959 ~ 11547031 (-)
trnav-cac_11 NA coding upstream 1207 11547451 ~ 11547523 (-)
LOC122326002 LOC107673834,LOC107756807,LOC107590054,LOC107570695,LOC101886266,LOC107667430 coding upstream 1743 11547987 ~ 11626108 (-)
LOC122326908 clk4b,LOC107756806,LOC107673840,LOC107749918,LOC107570696,LOC107667599 coding upstream 81296 11627540 ~ 11633199 (-)
mapk9 mapk9,LOC107756804,LOC107566214,LOC107673832,LOC107667593,LOC107590058 coding upstream 284916 11831160 ~ 11847343 (-)
G145708 LOC107667428,LOC107756812,LOC107590098,LOC107673825 non-coding downstream 5046 11532458 ~ 11535546 (-)
G145666 NA non-coding downstream 404061 11135914 ~ 11136531 (-)
G145657 NA non-coding downstream 433226 11105913 ~ 11107366 (-)
G145559 NA non-coding downstream 613105 10923433 ~ 10927487 (-)
G145549 NA non-coding downstream 649440 10885344 ~ 10891152 (-)
G145781 adra2db,LOC107566213,LOC107667592,LOC107756796,LOC107590063,LOC107689214,LOC107749943 non-coding upstream 448304 11994548 ~ 11998276 (-)
G145821 NA non-coding upstream 589103 12135347 ~ 12149436 (-)
G145831 NA non-coding upstream 605559 12151803 ~ 12154754 (-)
G145829 LOC107590069,LOC107689193 non-coding upstream 609086 12155330 ~ 12157944 (-)
G145835 NA non-coding upstream 631059 12177303 ~ 12179045 (-)
si:dkey-22f5.9 si:dkey-22f5.9 other downstream 592224 10911230 ~ 10948368 (-)
LOC122326213 NA other downstream 683164 10854666 ~ 10857428 (-)
prob1 LOC107673843,LOC107590111,LOC107733495,LOC107715308,LOC107557040 other downstream 823432 10711570 ~ 10717160 (-)
LOC122326060 gria3,LOC107548214,LOC107559424,LOC107700029,LOC107715357,LOC107669376,LOC107568987,LOC106603380 other downstream 1407757 10107731 ~ 10132835 (-)
aipl1 aipl1,LOC107664920,LOC107585578,LOC107743670 other downstream 1529665 9882417 ~ 10010927 (-)
LOC122326065 clk4b,LOC107673840,LOC107756806,LOC107667599,LOC107570696,LOC107749918 other upstream 260580 11806824 ~ 11812583 (-)
cnot6a cnot6a,LOC107756798,LOC107689185,LOC107590062,LOC107566218,LOC107749911,LOC108441023,LOC107667594 other upstream 425972 11972216 ~ 11985072 (-)
rgs14b LOC107721394,LOC107590127,LOC107689186,LOC107748103,LOC107588771 other upstream 465967 12012211 ~ 12057607 (-)
LOC122326615 LOC101885612 other upstream 612428 12158672 ~ 12161667 (-)
G145910 NA other upstream 828602 12374846 ~ 12375545 (-)

Expression


Co-expression Network