G146862


Basic Information

Item Value
gene id G146862
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 15424686 ~ 15426181 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU216900
ATTGCTAGCTGTAAAGAATAGCGTCCCTCTCTCTTACCCTCCAGCAACGGGGGCTCATCCTCGAAGCTGCTGCTGTACATGGACTGCGAGGAGGCTGGCGTGAAGGCCGGCGTGGGCTGGAAGATCTGCCCTGTGTACGGCTGCTGGGGCTGCATCATTCCCGGAGGAGCCGAGTAGCCCATCGGCTGAGAGTAGTCATACTGTCCATATGGTCTAtcgaTTGCTGTACGGGTCCTCTGTGTTGCTGTAGCCATATCCTCCTTGGTTCTGATCATCCACGCTGTAACTAGACTGATAAAAGTCTGTGTTGAAGTTGTCAAACCCTGACATTGCAAGCAGCCTGGAAGACATTAAGTAGAGAGATTGGTCAGCAGTGAAAACTGaatattatagatagatagatagatagatagatagataaatagatagatagatacatagatagataaatggataCATAGATAGAcacatagatagatacatagatacatagatagacacatagatacatagatagatagatagatagaataaaaGCCAAAACTTATTTGGGTAAAGAATTTGTGAAAGCTAActgttattaaaagaaaaacacatacacacacattcaaagtatcggcatatatatataatccaatCAGATGAAAAAATGTACCACGGTAAAGTAACTAAATTTTAACACCATGTACTAAAGACTTACATACTCAAAAAGGATACCACATTACTGTAAAATGATATCGCCAGCGCATCATCACAGTGGATATACAAAGGAAATATCCGACAGTTAACCACAGTGCTTTTTTGaggtaaaaatgaaattacCCACGGTGACAGAGGAACACTATACATTACAAACATGGTTGTATGTTAGCTAATCACTAATTCTATTTCTGACACATCTGTAGAAGCCGCAGACGAGTGCAGGGATCTTTTTATTAGCCTTGatgtctgtgtttgttgttgGGTTCAGTTAGCAGAGCTCCATTAAAGCCCTCGGTCTCTGTCAGCCTCGTTCGAGCGCTGCCACACGCACGTCTCCAAACACACAACACGGCTAAAACGCGGATATTTAGTGAAGTAGATGCCGAAGCTTTA

Function

GO: NA

KEGG:

id description
ko03040 Spliceosome

RNA

RNA id representative length rna type GC content exon number start site end site
TU216900 True 1095 lncRNA 0.41 4 15424686 15426181

Neighbor

gene id symbol gene type direction distance location
kctd16b kctd16,kctd16b,LOC107713177,LOC107661798,LOC107727255,LOC107692923 coding downstream 12441 15357132 ~ 15412245 (-)
rbm27 rbm27,LOC107713179,LOC107684215 coding downstream 166402 15244588 ~ 15258284 (-)
pou4f3 pou4f3,LOC107684219,LOC107713180,LOC106603866 coding downstream 187425 15235921 ~ 15237261 (-)
drd1b drd1b,LOC107587250,LOC107684217,LOC107713182,LOC107727287,LOC107581908,LOC107661723 coding downstream 232538 15186632 ~ 15192148 (-)
bod1 fa44b,LOC107581912,LOC107661728,LOC107662284,LOC107713186,LOC107587245,LOC105011257 coding downstream 489355 14932295 ~ 14935331 (-)
LOC122326537 arhgap26,LOC107713172,LOC107661718,LOC107692919,LOC106567493 coding upstream 81215 15507396 ~ 15573551 (-)
ndfip1l nfip1,ndfip1,ndfip1l,LOC107661716,LOC107581899,LOC106603856,LOC107692929 coding upstream 224122 15650303 ~ 15656889 (-)
mpp1 mpp1,LOC107661714,LOC107581898,LOC107692928,LOC107587257 coding upstream 232282 15658463 ~ 15670000 (-)
gabrb4 gabrb4,LOC107661713,LOC107581896,LOC103032374,LOC106603192,LOC106563397 coding upstream 276999 15703180 ~ 15747754 (-)
brcc3 brcc3,LOC107661795,LOC107582010,LOC107569767 coding upstream 1072343 16498524 ~ 16500915 (-)
LOC122326900 NA non-coding downstream 134965 15284100 ~ 15289721 (-)
G146835 NA non-coding downstream 146506 15277549 ~ 15278180 (-)
G146827 LOC107736512 non-coding downstream 155009 15269147 ~ 15269677 (-)
G146822 NA non-coding downstream 164226 15259908 ~ 15260460 (-)
G146803 NA non-coding downstream 255773 15168676 ~ 15168913 (-)
G146923 NA non-coding upstream 164874 15591055 ~ 15591258 (-)
G146925 NA non-coding upstream 176003 15602184 ~ 15603970 (-)
G146942 NA non-coding upstream 199378 15625559 ~ 15625760 (-)
G146944 NA non-coding upstream 202082 15628263 ~ 15628596 (-)
G146962 LOC107713150,LOC107582012,LOC107661796,LOC107587286,LOC107692920,LOC107692921,LOC107727247 non-coding upstream 249131 15675312 ~ 15679798 (-)
stc2b stc2b,LOC107587244,LOC107713187,LOC107581911,LOC107661727,LOC107727250,LOC108441629 other downstream 504132 14913089 ~ 14920554 (-)
G146556 LOC107673793,LOC107693849,LOC107571542,LOC107733475 other downstream 1161019 14259685 ~ 14263667 (-)
srsf1b srsf1b,LOC107704814,LOC107587230,LOC108278759,LOC108415197,LOC107661749,LOC103029385 other downstream 1197420 14223143 ~ 14227266 (-)
dynll2b dynll2a,LOC107554284 other downstream 1201996 14218607 ~ 14222690 (-)
LOC122326208 NA other downstream 1285528 14132254 ~ 14139158 (-)
G146999 LOC107603265,LOC107742454,LOC107661689,LOC107692966,LOC107578430,LOC107739203 other upstream 728183 16154364 ~ 16162231 (-)
LOC122326033 NA other upstream 877563 16303744 ~ 16304724 (-)
G147087 NA other upstream 913046 16339227 ~ 16339716 (-)
LOC122326634 ppp1r36 other upstream 1201025 16627206 ~ 16633897 (-)
LOC122326138 tmlhe,LOC107742426,LOC107703088,LOC107661707,LOC107715863 other upstream 1292891 16719072 ~ 16730030 (-)

Expression


Co-expression Network