kctd16b (kctd16,kctd16b,LOC107713177,LOC107661798,LOC107727255,LOC107692923)


Basic Information

Item Value
gene id kctd16b
gene name kctd16,kctd16b,LOC107713177,LOC107661798,LOC107727255,LOC107692923
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 15357132 ~ 15412245 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220672.1
TTTCCCGCGCCACAGCCCCGAGAGCGAGCGCCGCCGCACGATCTTCGCTCCTAAACCCCAAACCCCGGGATTATGTCAGAGGATCAAAGACGGGATTTTCTTCTAAACAGCTGGGATTATCGATCGACCCCCCCGGCCGCTGTAAAATACGcgatttgaactgttttcaaTTACATTCTTTCGAAACTATCCGGTTCGGCCGTTAAAAGTTGGATTCGAACCGCCGCTGAACTCGCAAGGAACTTTGGAGCCGCTTAAccgaaaaaaaacagataatgcTTTTTGCGGAATTTAAACAGCGTCTTCCGTTCGCGTACACGTGTACTATCTTTTTCAGGCGAAGGAATAAGCAGCCGTGTCCATCCGCTGCTGAGCAACCGATCTTTCTTCTCGCGGAGCGACTCTCCGCTGTGCGCCTGTAGTTCCAGCTCGGATACTCCGCCGTTCAcccccttttttattttgtttcatccGCCGAGAAgaggtagttttttttttttgtaaccgcAAGATACCTGCTCCAACCAGTTGGTTGAAATGCTCTTTTTATTGCCGTTTAATGTGCACGGTCCGTCGTCTGTATTTTCCAAACCCTCCCCGAAGCTGTAAAGAGCGAACTTTCCGAATACGGATATTTTTGGGCACCCATGACCGAAACGATGGCGTTAAGTGGAAACTCTAGAGCTAAAGACAACAGCTTTCCAGACGTTATTGAACTAAACGTCGGGGGGCAAGTGTATTATACCCGCCACACCACGTTAATCAGCAACCCCGGCTCTCTTTTGGGGAAAATATTCTCTCCTAAAAACAACGCGTCGAATGATCTGGCCAGGGACCCCAAAGGTCGTTACTTTATCGACCGGGATGGGTTTTTGTTCAGGTACGTGTTAGACTACCTCAGAGACAAGCAAGTTGTCCTCCCCGACCACTTCCCCGAGAAGGGAAGGCTGAGGAAAGAAGCGGAGTACTTTCAATTGCCAGACTTGGTTAAACTCTTAACCCCGGACGACTCGAAGCCCAGTCCCGACGAATACATCCACAGCGACTACGAGGACGGCTCTCAAGGAAGCGACCAGCGGATGTGCCCTCCGCCGTCGCTCGTCCCCGCCGACAGAAAAAGCGGCTTCATCACTGTGGGATATCGCGGGTCTTGCACGATGGGCAGGGAGAGTCAAACCGACGCCAAATTCCGGAGGGTGCCGCGGATTATGATTTGTGGGAGGATCGCGCTGGCCAAAGAAGTTTTCGGCGAGACCCTGAACGAGAGCAGGGACCCGGACAGGACCCCTGACAGATACACGTCCCGCTTTTACCTCAAGTTCAAGCACCTGGAGCGCTCTTTCGACATGCTCTCGGAGTGCGGCTTCCAGATGGTCGCCTGTAACTCGTCGGTGACGGCCTCGTTCGTCAACCAGCACACCGACGACAAGATATGGTCAAGTTACACTGAGTACGTCTTTTACCGTGGCCCGTCTCGATGGTCTTCTCCACCTTGCGACTGCTGCTGCAAGGGTCACAAAGGCGAAGGCGAAGGCGAAAGCGGAACCTCCTTCAACGAACTCTCCACCTCCAGCTCAGAGAGCCACTCCGAGGCCAGCTCGCCGCAAGGTACCGTCATCCGAGGGCCTGTCAGCCGACAGACGCACGTGCAGACACTGGACAGGCCTCCCAAGAAAGGCCCCGTTCAGCatctcctgcagcagcagcagtccgAGCAGCGACGTAAGAGCGACCTTCTCCGGACGCTCACCGCAAGTTCCCGGGACACCAGCACCTGCAAGAAGCGTCCAGCGAAAGAAAAGTTGACTGTGGAAGAGGAGCTGGAGAAGTGCATCCAGGACTTCCGCAAGATCAAGATTCCCGAGCACTTTCCCGAGCGCAAGTACATGTGGCAAGCCGACCTCCTGCGCAAATACCGTCTTTGAGGAATGGCGGTAACCTAAAAGCGCAAGCTACAATAGCGTACGTGTTCACTACTAATACTACAACTACTATTGCTAGTACACTCCACTCTACTACTGCCTCTGACTCGTTGTCAATGTCTCTCGATAACCCGAGCGACCACTTCATCCGCTCAAACGCTAATTGTTTACCTGTAGACACTTACATTTTTGTAGAATTCCAGAGAGACGCGAGTGTTTTCGAAAGACGCACCACTACTTGTCTCTTTGGTTTCGATCTCCCTTGCCGAGTTACACTTTGCGTGTAATCGCGTTTGTTACAACTGAATTTTTGACCTCGGTATGTTAGTGCCACGGCGACTGAGTTGAGGTGGCCCAGAGGTTGAAAGATGAATGTGTATCCAGctcataaataatgcatgtgGTCCCAACTGTGCCCTTTCTAAGAATAGCCACTGCCTTGGCGGATGTAAGAGTGGGTTTCCATTTCAACACTCTGAGAAGCACAGAAGACCATGGAGCCAAGCTTTTTCGGATTCTCCACGTTCCATTTTCATACCTCAGCCGAGCTACAATAAAAGTCACAGCATAAAAGGGTTGTGGGTGGAAACTCAATAGCATCACAAAAAGGCTTTGAAACTGCTGCATGAAATCTATTGATTTAAACATGATATTCCAAATGGGAGTAGATGACGGCTTACTCCTGAGGTCAAAGTTTAAATATGGAAAATTCATGACAATAACAGGAAAGGGTAAAGATTATATGCTGGAAGCAATCACTCATTGATCAACATGAACATAGTTTAGGGTCATGCAATCTTTTTGCCGTTCATTCCATCACATACAATATTGAACGAATATGAGAAATGGAAGACGTGTTTGCTCGGTAAGGAATATTAATTTTGAGACCTATACATAACTGAGGATAATTCAGTGGAAACGTTGGTGTATGTCATGGTTAATAGTGAACAATATCCTTAATAAACACCAATAAAGCTtagatatattttgtttaactaattttaatttaagtcgCTGCTActgagtttattttaaaactgtgcTAAGGAAAATGGATTAATAgcttacaatatttaaataaaaactaaaataataataataataataccacattttatttcaaactgttCAATTACAATGGACAATTatggaaaaaaatgctgcttCATCATTAATTTTCTTTCCTATATTTTATACCCTTACTAATGAACAGCCGTAAACTGAGTTTATGCTTTTAATGTAACAcaataattgcaaaaatgtgACTAGACGTTCAAAGAGAGGCGCATAAGTTTATACTGTACTGCAAGATGTGGACCTTTTgatttgtattgcattttatatatatacttatatatatatatatatatacacttgtTATGAAATCGATTCAGTACGTAAATGACAGACACGGTCTTGCAAACTCTTTTGCAAGTAGCCCTTTGAATtggaatataaattaaaattcattgaGCGCTAATCAAAATCTAGCCTCCAGCCTCTCATTCTCCTATCACGAAGTCTACTTACCACagatataaaaatgaaaggGCAGAGAGAATATCATCTATAATAGaatagattatttattaactgGGTGCGTAAAAGGATATatgaaaagtcattattttattgcacagGTTTCCAACTTTATTCCCAAACGCTGtccatattgtaaaataataacattgcGAATCACttgtaaataacattaaaacgtattttatatgaattgcACTTGTAATCTTTAATAGATTACTCTTAGATCACTCAAGACAGCTaaacaataaaagtgtttggaatccatatgaatatatatatatatatatatatatatatacaaattatataataaagtaCCAGATGAAGCTACAGTATCTGAATGGGAAAAGACACAACTGTGGAATTAAAGTTGAGCTGTTGTATGTCACACATGAGCACAACTCACCTAAAGCACAAACTCACCGCTTCTTTATACCAGGAAGTACCTGGGCATTCAGGTGGCATCCACGCTGTGCTGTGCAGGCACCACAAAACAACACTCTAGCTTCTGTAATTGGCTATTATTTCCTATTTATTTCATATAGGCCTACATCTATATGTACACTGTTTTGGAGATATATAGCAAtggctatatatttttatacagtagCCAGAAAGAGAGATCAATACATGatcatttgattaaataaaagagTCAGAGATGGAATTAATGGCGTGAAATTCCAACTAAATTTTGAGTCACACTATTAGGTGGTCTTAACTGCTATGcacttgcatcaaaaaatatgtacttattgtggtcatataagacacttttgctgctattggcGGGGGATACGGGTCAGGGACTGGTTTGGTGGgatgggtaggtttaaaggATGGGTCAGCGGTGTAGTTATACGTGTAATTACAGGAAATAATTACAGATATTAATATCAGTACAACGTAagaacatgtatgtacacaataagtgcatttcactttaaatgtaagtacatttaaggacacctaatataaagcggGATGTTTACACCACATCGCTAATCACAGCCAGATGAAGTAGAAAGCGGGAAAACCCGTCTCTCCCGTTTAAAGATGCTTTCACACTGGCAGCGGTTCACgtgaaacattacaataatccgaCTGGCTGTTATCGCGCTGCGTGTAGCATTAGCACTGAACTAGGCCTCTTTCACACTCCGTGCAAAACAGCATTGGATTTggccaaaatacagtaaaaatgccCTATAATTATAATTACCGTAACAACGTTGTGCAatatatgcttttaaataagGGATTAACTACTCGCCtgctttcatttctgttttctagcgtaataacacaaaaagtgtaataaatccGGGGTCCGTTCTGTGTAAAATTAATTACTTCGGAGATATAATATGATCCCGCTCCTCATGCAAATCAGATTTCACAATGATCAGGTTTGCAAAAGTTGGTGGTGCATAACCGCTTGAAAATGCGTTCTCATTATGAGGTGCGTGCGGTTTACATTGGAGAACAAAATGGCAAGATATCGTCAAGCCCGTGAGAAAGTCTCGAAGGAACCGGCGGTAAATTAGCCTTTTGGGTTCTGCATCATTCTACCGCACGCTCTTGATAACCATTGTATAATTTACGGCCATTATTAGAGCAAATGTTCCCGCTGCTGCTTCTCTTGCGATGCGGTGTGAAACAGGCCTCAGAGTTGCTGATGTTCATTTGAAATTCCAGGCCCATGACACAGGTTTCATCTCACTTCTCTCAGAGGTACGGCTCTCAGCGCTTTCACATTGGCGCATTTTTCAATATTCTGCAATATTCCTCGTAACTGTCAGAAAATAATGagaacatctttttttctttttcttaaatgaTCCTGTCTTTCTCAGACCGGACGGGATAGCCCGGTTCCCCCTTCTCTGTGTTAAAGGAAAAGCTCGCGTCTTGCTATTTATTAAAGTCCTCGGCAAGCTGTAGCTTGAGATCAGTGTTATGCTGTTGTGCTcgacatgtttatttattatttatatacgcTCGCGCGTTCGGTTTCGCACCAACCGATAATTTCAGATAACTAAAGAAACACCTCTGCTAATAAACCGGCAGCGAATTATAGTCTTCCGCACAGCCGGGATCGGAAATCGGCCAAAGGATGAGGCTGCAGGTATCagtaaaagtgacaaaaatgtcaaaatgtatgattttttttttgtttgatataTTTCGTAATATTCTGATAAAGGCCTTAGACATAGATAAAACGTGTTGCGCTATATGTTATATCTTCCCGAAGGCATACAATCAGTTAAAAATGATCGGCACTGCATCAAGCAGAAATGTAAAACcctatttttttgcaaaagttaaattatataataataataataataataataggcatTAAAACtacactgtacatactcttaaATTCAAACACGAAGAAGGATCGTTTATCATTGTTACCCAACGCAATCGCTCAGTTCATTACTCTTTTGGCGATTTTGTTGGCTAATTCATCCGAAATGTTCTTTTTACGAAGAAAATacgaattttttttatttttaatgtaatgcacTTACGACCCAGTTGCGTAAGGATAGAGGCGGATCTCATGCTTCTTCTATTTACTTCTAAAAATCTAGTCCAACGCCGCACAAATTCGTACGAATCTTCCACCATCATTTCATACGAGTTTCACATTGAGCGCTTGCACCCGTTAAAGATTGTACGACGTGCGCAAAACCTCTCAAAGCGGTCCGTTTTGAAGTTCGCTCTGTATTTTCTCGAGCGCGCGGAGGAATGAAAGAGACGTTTAGGATCGTTGTTGATGTCTACGTCGTTGCGCGCAATGGAAAATGTGCATCAAGACGTACCAGTCGAGTGAAGCGGGTTCGAAAAGAAAGGAAATGCGACGGTACCGAGCAACTTTTTGAAACGGGCCAGCgaggagaaatgtttggcgCATGTTTTGGAGGCACTGCGTCTGTTTCGGCTTCTTTCGGATGTTCACATGCTCGTGGCCCGCTCTCCCGCCAGGCAGGCCTGCTTAAGATGTCGCCTGGCGTACCAACAGCGACACCCCCTATTGTTTGAGcgctttttatgttttcttttaaacccACGAAAAAgacgggggaaaaaaacagactgACAAAACCGTACGTGCGAGAATAAAACTAATAAGCGAATGCATTAAAACGCTCCGTTTGAAAAGGTGCAGAACACGCCACAAAAAAGGATGTCGTTCGGTGTTGTTTCGACTTCAAAAAAGGTCCGGATCATTGTGCGCATGCCAGTGTATGAATTATTGCAAAATGTTTGTCTGTTCGTGATGTTAAAACATACCAAAAATACAGGGAAAAAAGGTAAAGCACAAAGTGTGGGTTGTGTCTGCTAATGTTTGCcacaaatgtactgtatattgttaTGTATAAAAGAGAGCATCGTCTGAGATGTCTTTAGATACAAGCATAgaggatttaaaaatgtacgAGTACATCAAATAAAGTTCTATAGAAACCA

Function

symbol description
kctd16b Predicted to act upstream of or within ion transport and protein homooligomerization. Predicted to be active in postsynaptic membrane and presynaptic membrane. Orthologous to human KCTD16 (potassium channel tetramerization domain containing 16).
kctd16 Predicted to be involved in protein homooligomerization. Predicted to act upstream of or within regulation of G protein-coupled receptor signaling pathway. Predicted to be located in cell projection. Predicted to be part of receptor complex. Predicted to be active in postsynaptic membrane and presynaptic membrane.

NR:

description
BTB/POZ domain-containing protein KCTD16

GO:

id name namespace
GO:0051260 protein homooligomerization biological_process
GO:0006811 ion transport biological_process

KEGG:

id description
K21918 KCTD8_12_16; BTB/POZ domain-containing protein KCTD8/12/16

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220672.1 True 6953 mRNA 0.43 2 15357132 15412245

Neighbor

gene id symbol gene type direction distance location
rbm27 rbm27,LOC107713179,LOC107684215 coding downstream 98848 15244588 ~ 15258284 (-)
pou4f3 pou4f3,LOC107684219,LOC107713180,LOC106603866 coding downstream 119871 15235921 ~ 15237261 (-)
drd1b drd1b,LOC107587250,LOC107684217,LOC107713182,LOC107727287,LOC107581908,LOC107661723 coding downstream 164984 15186632 ~ 15192148 (-)
bod1 fa44b,LOC107581912,LOC107661728,LOC107662284,LOC107713186,LOC107587245,LOC105011257 coding downstream 421801 14932295 ~ 14935331 (-)
ppp2r2bb ppp2r2bb,LOC107587242,LOC107727286,LOC107661780,LOC107581916,LOC107713191,LOC107662050,LOC108441626,LOC106567445,LOC105902388,LOC107677389,LOC107697624,LOC107750325,LOC107587064,LOC107751325 coding downstream 491730 14810910 ~ 14865402 (-)
LOC122326537 arhgap26,LOC107713172,LOC107661718,LOC107692919,LOC106567493 coding upstream 95151 15507396 ~ 15573551 (-)
ndfip1l nfip1,ndfip1,ndfip1l,LOC107661716,LOC107581899,LOC106603856,LOC107692929 coding upstream 238058 15650303 ~ 15656889 (-)
mpp1 mpp1,LOC107661714,LOC107581898,LOC107692928,LOC107587257 coding upstream 246218 15658463 ~ 15670000 (-)
gabrb4 gabrb4,LOC107661713,LOC107581896,LOC103032374,LOC106603192,LOC106563397 coding upstream 290935 15703180 ~ 15747754 (-)
brcc3 brcc3,LOC107661795,LOC107582010,LOC107569767 coding upstream 1086279 16498524 ~ 16500915 (-)
LOC122326900 NA non-coding downstream 67411 15284100 ~ 15289721 (-)
G146835 NA non-coding downstream 78952 15277549 ~ 15278180 (-)
G146827 LOC107736512 non-coding downstream 87455 15269147 ~ 15269677 (-)
G146822 NA non-coding downstream 96672 15259908 ~ 15260460 (-)
G146803 NA non-coding downstream 188219 15168676 ~ 15168913 (-)
G146862 NA non-coding upstream 12441 15424686 ~ 15426181 (-)
G146923 NA non-coding upstream 178810 15591055 ~ 15591258 (-)
G146925 NA non-coding upstream 189939 15602184 ~ 15603970 (-)
G146942 NA non-coding upstream 213314 15625559 ~ 15625760 (-)
G146944 NA non-coding upstream 216018 15628263 ~ 15628596 (-)
stc2b stc2b,LOC107587244,LOC107713187,LOC107581911,LOC107661727,LOC107727250,LOC108441629 other downstream 436578 14913089 ~ 14920554 (-)
G146556 LOC107673793,LOC107693849,LOC107571542,LOC107733475 other downstream 1093465 14259685 ~ 14263667 (-)
srsf1b srsf1b,LOC107704814,LOC107587230,LOC108278759,LOC108415197,LOC107661749,LOC103029385 other downstream 1129866 14223143 ~ 14227266 (-)
dynll2b dynll2a,LOC107554284 other downstream 1134442 14218607 ~ 14222690 (-)
LOC122326208 NA other downstream 1217974 14132254 ~ 14139158 (-)
G146999 LOC107603265,LOC107742454,LOC107661689,LOC107692966,LOC107578430,LOC107739203 other upstream 742119 16154364 ~ 16162231 (-)
LOC122326033 NA other upstream 891499 16303744 ~ 16304724 (-)
G147087 NA other upstream 926982 16339227 ~ 16339716 (-)
LOC122326634 ppp1r36 other upstream 1214961 16627206 ~ 16633897 (-)
LOC122326138 tmlhe,LOC107742426,LOC107703088,LOC107661707,LOC107715863 other upstream 1306827 16719072 ~ 16730030 (-)

Expression


Co-expression Network