G146822


Basic Information

Item Value
gene id G146822
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 15259908 ~ 15260460 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU216843
CCATTACTGACGTTCAAGGGAACTTTCACTACCTTCAGTCCCATTTTCTTCAGGTCTTCTACAGCAAGAGGAGGGAAATAATCCAGCCAATGTTCAGCTTCAGCAAACTTCACGATGTCTTCGTCCCGCAGCCCCAGAGACTTCATGATGTCCCACTGGAACTTGGAGCTTCCGGACTTTGCTACAGCTTTGCTCTTCCAATGGCATCGCACACACCTTCTTGCCCTTTGACTTGTCCTTGATGATGACCTCGTCGGTGAACTTCTTctgctcttcctcctcttcgTCTTCCTCAGGGAACTGCGGCGGGTTTCCATACAGCTCCATTTCTCTCTTCAGCTTGTCCGCACATGCCTGTTAAAACATTGGCGTTGATGACTAACGTGTTCAGATACGAGGTGAGGAACTTTAATCTACTCACTTTGATGGGCATCCCAGTGCAGTGAAGTCCAAATGGGAAAAGACAATGCTTTCCTTTCAGCC

Function

GO:

id name namespace
GO:0022613 ribonucleoprotein complex biogenesis biological_process
GO:0042254 ribosome biogenesis biological_process
GO:0003676 nucleic acid binding molecular_function
GO:0097159 organic cyclic compound binding molecular_function
GO:1901363 heterocyclic compound binding molecular_function

KEGG:

id description
ko03008 Ribosome biogenesis in eukaryotes

RNA

RNA id representative length rna type GC content exon number start site end site
TU216843 True 483 lncRNA 0.48 2 15259908 15260460

Neighbor

gene id symbol gene type direction distance location
rbm27 rbm27,LOC107713179,LOC107684215 coding downstream 1624 15244588 ~ 15258284 (-)
pou4f3 pou4f3,LOC107684219,LOC107713180,LOC106603866 coding downstream 22647 15235921 ~ 15237261 (-)
drd1b drd1b,LOC107587250,LOC107684217,LOC107713182,LOC107727287,LOC107581908,LOC107661723 coding downstream 67760 15186632 ~ 15192148 (-)
bod1 fa44b,LOC107581912,LOC107661728,LOC107662284,LOC107713186,LOC107587245,LOC105011257 coding downstream 324577 14932295 ~ 14935331 (-)
ppp2r2bb ppp2r2bb,LOC107587242,LOC107727286,LOC107661780,LOC107581916,LOC107713191,LOC107662050,LOC108441626,LOC106567445,LOC105902388,LOC107677389,LOC107697624,LOC107750325,LOC107587064,LOC107751325 coding downstream 394506 14810910 ~ 14865402 (-)
kctd16b kctd16,kctd16b,LOC107713177,LOC107661798,LOC107727255,LOC107692923 coding upstream 96672 15357132 ~ 15412245 (-)
LOC122326537 arhgap26,LOC107713172,LOC107661718,LOC107692919,LOC106567493 coding upstream 246936 15507396 ~ 15573551 (-)
ndfip1l nfip1,ndfip1,ndfip1l,LOC107661716,LOC107581899,LOC106603856,LOC107692929 coding upstream 389843 15650303 ~ 15656889 (-)
mpp1 mpp1,LOC107661714,LOC107581898,LOC107692928,LOC107587257 coding upstream 398003 15658463 ~ 15670000 (-)
gabrb4 gabrb4,LOC107661713,LOC107581896,LOC103032374,LOC106603192,LOC106563397 coding upstream 442720 15703180 ~ 15747754 (-)
G146803 NA non-coding downstream 90995 15168676 ~ 15168913 (-)
G146753 NA non-coding downstream 258168 14953211 ~ 15001740 (-)
LOC122326073 NA non-coding downstream 386098 14871248 ~ 14873810 (-)
G146622 dach2,dacha,LOC107581921 non-coding downstream 817017 14441999 ~ 14442891 (-)
LOC122326149 NA non-coding downstream 1087109 14169728 ~ 14172799 (-)
G146827 LOC107736512 non-coding upstream 8687 15269147 ~ 15269677 (-)
G146835 NA non-coding upstream 17089 15277549 ~ 15278180 (-)
LOC122326900 NA non-coding upstream 23640 15284100 ~ 15289721 (-)
G146862 NA non-coding upstream 164226 15424686 ~ 15426181 (-)
G146923 NA non-coding upstream 330595 15591055 ~ 15591258 (-)
stc2b stc2b,LOC107587244,LOC107713187,LOC107581911,LOC107661727,LOC107727250,LOC108441629 other downstream 339354 14913089 ~ 14920554 (-)
G146556 LOC107673793,LOC107693849,LOC107571542,LOC107733475 other downstream 996241 14259685 ~ 14263667 (-)
srsf1b srsf1b,LOC107704814,LOC107587230,LOC108278759,LOC108415197,LOC107661749,LOC103029385 other downstream 1032642 14223143 ~ 14227266 (-)
dynll2b dynll2a,LOC107554284 other downstream 1037218 14218607 ~ 14222690 (-)
LOC122326208 NA other downstream 1120750 14132254 ~ 14139158 (-)
G146999 LOC107603265,LOC107742454,LOC107661689,LOC107692966,LOC107578430,LOC107739203 other upstream 893904 16154364 ~ 16162231 (-)
LOC122326033 NA other upstream 1043284 16303744 ~ 16304724 (-)
G147087 NA other upstream 1078767 16339227 ~ 16339716 (-)
LOC122326634 ppp1r36 other upstream 1366746 16627206 ~ 16633897 (-)
LOC122326138 tmlhe,LOC107742426,LOC107703088,LOC107661707,LOC107715863 other upstream 1458612 16719072 ~ 16730030 (-)

Expression


Co-expression Network