dbn1 (dbn1,LOC107732329,LOC107692779,LOC107707127,LOC107587196)


Basic Information

Item Value
gene id dbn1
gene name dbn1,LOC107732329,LOC107692779,LOC107707127,LOC107587196
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 13356180 ~ 13418283 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220894.1
gcagcagcgtctCTTTGTTCGGCGTGCAAcatctctcctcctcttctcgcGCTCCGCAGTGACTCTCGCGTTCCTCATCATCACTGCTACACTGGTCTGGATGATTGCAGTGGCAGCAACATGGCTGTGAATCTCAGCAAGAACAGACTGGCCCTCTTAACAGCCTACCAGGACGTTATCAGCGAGACGTCGGCAACCGACtgGGCCTTATACACATATGAAGATGACAGTAACGATTTGATCCTGTCTGCATCAGGAGATGGCGGCCTGGCAGAGATTGCAGTAACCTTCGATAACACTCGGATCATGTACGGTTTCTGCAGCCTGAAGGAGCCCAGCGCAGCCCTGCCACGCTACATCCTCATCAACTGGGTTGGTGAAGATGTGCCTGATGCTAGGAAGTGTGCCTGTGCCAGTCATGTAGCCACCATAGCCGAATTTTTCCAGGTGGGTCTTCCCAAGGGTGTTGACGTCATTGTGAACGCTAGCAGCATGGACGACATCGACCCCTCGGCCATCGGACAGAGGCTGACCAATGGGACCGCTCCAGTGGCAAGTCCAGTGCTTAGCCGCCTGCGAATGAGAGACGAGGAGAACGCAGAGCACGTTGGCACCACCTACCAGAAAACAAATGCAGAGATTGAGATGAAGAAAATCAATCGAGAGGAGTTCTGGGAACAAGCCAAGCGGGAGGAGGAGTTGagaaaggaggaagagagaaggAAGGCTTCTGAGGAACGGCAGCGCTTTGAAGCCGAGAGGATggagctggaaaaaaaagagcaagaggaaagagagaagCGGTACCGTGAGAGGGAGCGGCAAATCGAGGAACAGAGGAAGAAGAtgcaggaggaggaagaggccAAAGAGAGGTCAAGGAATCAACCCTTGATTACAGAGCCCAGCTATGAAGACCCTTCCCTGGACAAAAAGGAAACAGAGGTCGAGGAAGCAGCAGCCATCATTGCCCAAAGGCCCAGTAACCCTCGTGAATTCTTcaagcagagagagagggcCACAGCCAACAGCGTGGACATCTCACCAGTCACCACACACAGGACCGGCCGCTTGGACAGTCCATTCTTGAGGCAGCAGCACAGTCCATCCGATTGCAGCCCGCCCCCTTCTCGCACTCCGCCCCATTCACGGCGGCAGCCAGGTCCACCTGATGACTCTACTGAAGGAATCCTCGAGCGCAGCATGACCACTGGATGTACTCCCATCCCCAAAATTGCCATTCAGGAGGAAAAAGAGGACTTTTTTCGAAAGGAGTTTGCCTTTGACACTCCCAAACAAACTCCAGTGCAGGAATCTGGATTTGTCAAGACCTCCCCAAGTGTTTCTCCCCAGTCCGCTCCTGCTCCATTACCCAGCACAGACGACAGCCTGCTAGACTTGTGGGACAGTGGCCCAGCGCCTGCTACAGCCCCCTCCCAGGCCCCCAGCCACATAATGGACCTGATGGAGGACACCCCGGAGCCTCATCTTGCCAGCTCCTCCCCTGCTCTCCCGCAGCCGCTCTTGAGCTTCGATGAGGTGCCTGACACCCCCTACTGCACTGGCACAGAAGATGATCCCTCCAGCCTGGTGGACGTGGCCGGAACCCACCAGATGACCCTGAGTTACCAGCAGGCCCTGCAGCACGCTTCTGGCTCTGACAGCCAGGACATGGATGATGGACAGCTGCTGTTGACCAATGGAGACACGCTGCTTAAAGAAGGGACCCAGgcCAGTGAAGGCtatttcagccaatcacaggaGGAGGATTTTGCCCAGTCAGATGACTGCACTGCAAAAGTCAACCCAACACCAGTTTTTTACAATAAACCACCAGAAATCGACATTACGTGCTGGGATACAGACCCCGTGATGGAAGATGATGATTAGGAGCGACTGAGGGAAAAAGAGGCGGCACCTCTATGAAAACTTGTTTTACAACAGTTACAGAAGTCttgcatcaaaatgttttagataaaacaccaacaacaaaaacaacattagcCACAGAAGAAAAGGACTCGGGTTATTGTTAAAGATGCCAGTGGGTATGAGCGCTCTcggtttgtgtatgtgtgcgtgagtgtgtttattatttatttcaatcattttttttttctatgcagaGTATAGCACAGTGTGTCTCTAGCGCTCACCTGTGTTGTATCGATCCCTGTGCCTAACAGGTGTGTGTAGTAGCAGATTAGACCGTTCTGTTTTAGTTCTCCTTTATCAACACTGAGGTTAGGTCTGCTCAGTGGTTCGATCAAGTTCCCTACAAATCTTAGTTGTTTAGTTGAATCACGTGTTTGAGTGTTATGCCCACAATGGCCTTTTGCTTTGATGACCCTCACCTTCGTCGAAGCAAAGGCACGTCAGAACGCGATTTTAGCTTCAGTTGAGTCAAATGTTTAGCAAACGGAAAATGAAGGGGGTTTATGTGATTACGAAACAATTTTGTGTTGTGCCAATTATTTCGAGTATGACGTGTTGGTGTAACGGCCTTTTAGGACTTTAGCGCCAGGTGGCATATGTATATTTTGACTACATATGAGACAATGTGTATAAACAATGGCTGAAACTgacttttggttttttttggaaaaactgCAATAGAGCTTCGATTTGTTGAGAAATTTAGGCAATAACAGTCGTAGTGGAATCCATTGGAAAAATCGTTTTAGTTATATATTCGGTAGTGTGCgtatttgtattattactgCAAAGGCTCAGTACTCATACTCTACGTAAGTACGCAAATGGTGACGCGAATAACAAGTGTGTAATCCTGTTTAAAGATCAgtagtttaaaatgaaagttttgtcaTTCTCTTGCAGAACAATGTAAGTCAGGCagtgtttggaacaacatgagggtgaattaatggcagaatttttattttttggcaggACTAACCCTTAACGAAGCCAAAATATTTACCTTCGTATCACCATTATTCCAATATCTAGACATAAAACGTGTAGCTTACCAGGATTCAAACTGTCATTCAGGCAGGTCTcttactgtcatttttgtcttaaaaaagCTGGTTTACTCTAATGCTAGTTATAGAACATTGTGTGGCGGTGCTAAGAATGCACATTTTAGGAAGCTGCGGCGAGCAAAATCAAAGCATTTGTGTTAATTTACTTGCGTAGAGTATGGTTTCGaccttgtttctttttttttttttgtggatgtgATTTTGAaccttttcatttagttttacgCTCTGAGGGAAGGCTCCTTATAATCTCAGATTTCAAGCCAcggtaaatataaaattaatgtgaCCCTTATAATATTCCTTTAGGTTGTTGCTAGTTGACCCAGGAATTAATGAGTAATGTGACCTTAGCAAGTCCAGCAAtttgtaaagacatttttattaccCTAAAATTGCAACAAAATTTGGATTTGTAACTgacttttacacacaaaaaaatgcaggGACACGTTGCCTTGCTCAAGGGCAGAACGGTGAGAGATTATCTCACTTATTCAACACTGACTCAGTCTGTAATATTTGTTGTACCAGCCCACATCCTTAACTGCTAAGTTATCACCACCCACTGTCCCGGCCTTGACTGACCACTGTCTTCCTCATACTTTTAGTCAAGTTGTAAAGCGGCATCGTAACATCTTGGTTTTACAAAGGATTTATGGAGTGGAAAAGCAAGCAATAAGACTAAACCAATagtattgttttgtaaatagCTCTAATTTTGTGCTCATGTAAAAATGTGCTACAATCACTAACATTGATTCACCGCCCATGAAAAACAGAGGTTGGCATACGTTTGGATTGGGTTTCTTATGTTTCTTTAGTGAGAGAGGAAAAAGGTCGCTCAGTATGATACCTAATAGGGAGTAACCGCATCTTTAACAGTAACTTAGCCCCTTTTGAAATAACTTTCATGTATTCCTGTTCACCCTCCTACCTCCTTAGTAGTGATTATTACTCTCTTTCTCCCTCAAACTACTAGGagactactactactactaccactactattattactattactactactgttCTACTACGGTAATTTCTTCTTTGCCCCTGAAGCAAGGCTTAGCGACTCCtgaaagttctttttttaattatttttttctatctcTTCCTTTTTCCGTCCGCTTCTCACACGCTGTTTTTGAAACAAGCACAAGATCTTTTGTGACATGCTATGTGCTTATGTATGTTaataaaagactttaaaatccttcaaaaa

Function

symbol description
dbn1 Predicted to enable actin filament binding activity. Predicted to be involved in generation of neurons; postsynaptic actin cytoskeleton organization; and regulation of actin filament polymerization. Predicted to act upstream of or within actin filament organization. Predicted to be active in several cellular components, including lamellipodium; postsynaptic density; and postsynaptic membrane. Predicted to colocalize with actin filament. Orthologous to human DBN1 (drebrin 1).

NR:

description
PREDICTED: drebrin

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220894.1 True 4233 mRNA 0.45 16 13356180 13418283

Neighbor

gene id symbol gene type direction distance location
nop16 nop16,LOC107732324,LOC107587288 coding downstream 49287 13304660 ~ 13306893 (-)
wwc1 wwc1,LOC107561708,LOC107732322,LOC107728763,LOC107692792,LOC107587260,LOC107676440 coding downstream 56384 13263574 ~ 13299796 (-)
cnot8 cnot8,LOC107728764,LOC107587194 coding downstream 92955 13259193 ~ 13263225 (-)
mrpl22 mrpl22 coding downstream 110867 13243327 ~ 13245313 (-)
LOC122326020 LOC107754528,LOC107655654,LOC107596386 coding downstream 200704 13153506 ~ 13155476 (-)
zgc:77151 zgc:77151,LOC107581964,LOC107692781,LOC107707128,LOC107697371,LOC107587198,LOC107732308 coding upstream 3891 13422174 ~ 13435322 (-)
uimc1 LOC107732339,LOC107692782,LOC107582006 coding upstream 22331 13440614 ~ 13449520 (-)
LOC122327025 NA coding upstream 26795 13445078 ~ 13445207 (-)
fgfr4 LOC107732336,LOC107581961,LOC107692784,LOC107707132,LOC107587200,LOC107697367 coding upstream 57589 13475872 ~ 13486830 (-)
rab24 rab24,LOC107581958,LOC107697339,LOC107692791,LOC107732326,LOC107707125,LOC107587201 coding upstream 133016 13551299 ~ 13555713 (-)
G146155 NA non-coding downstream 293447 13062086 ~ 13062733 (-)
G146153 NA non-coding downstream 294558 13060420 ~ 13061622 (-)
G146151 NA non-coding downstream 296151 13059731 ~ 13060029 (-)
G146150 NA non-coding downstream 301006 13054953 ~ 13055174 (-)
G146145 NA non-coding downstream 306318 13049324 ~ 13049862 (-)
G146284 NA non-coding upstream 166171 13584454 ~ 13584797 (-)
G146312 NA non-coding upstream 264754 13683037 ~ 13685204 (-)
G146373 NA non-coding upstream 381053 13799336 ~ 13799571 (-)
G146378 LOC107675202,LOC107581945,LOC107587211,LOC107697354,LOC107726795 non-coding upstream 400821 13819104 ~ 13823309 (-)
G146468 NA non-coding upstream 666223 14084506 ~ 14088182 (-)
LOC122326016 NA other downstream 254659 13100116 ~ 13101521 (-)
G146159 NA other downstream 272686 13083124 ~ 13083494 (-)
LOC122326748 LOC107739910 other downstream 873016 12482213 ~ 12483164 (-)
G145910 NA other downstream 980635 12374846 ~ 12375545 (-)
LOC122326615 LOC101885612 other downstream 1194513 12158672 ~ 12161667 (-)
LOC122326201 cox7b,LOC107713147,LOC107582003,LOC107675192,LOC107697350,LOC107726769,LOC107598778 other upstream 448132 13866415 ~ 13867643 (-)
LOC122326208 NA other upstream 713971 14132254 ~ 14139158 (-)
dynll2b dynll2a,LOC107554284 other upstream 800324 14218607 ~ 14222690 (-)
srsf1b srsf1b,LOC107704814,LOC107587230,LOC108278759,LOC108415197,LOC107661749,LOC103029385 other upstream 804860 14223143 ~ 14227266 (-)
G146556 LOC107673793,LOC107693849,LOC107571542,LOC107733475 other upstream 841402 14259685 ~ 14263667 (-)

Expression


Co-expression Network