coro6 (coro6,LOC107685477,LOC107588759,LOC107721413,LOC107728955,LOC107590076,LOC107689201)


Basic Information

Item Value
gene id coro6
gene name coro6,LOC107685477,LOC107588759,LOC107721413,LOC107728955,LOC107590076,LOC107689201
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 12267276 ~ 12280107 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043221733.1
cgtttgctctctctctcttctcgcTCGATGTTCAGGAACGACTAGTGAGGAGGAACTCGCGCTAGTTCTGCGAGTCTGCACCAAGTTTGTGACCTGGAATAAACGAGACACTTCTAAAAAGCGCGGCGTCGAGAGGAGCCTTAAACCGTCCTGAGAAAGGGGAAGAGCAGATTTAAAGACGTATATTCCCCAAAGACAGCGCCATGAGTCGCAGCATTGTGCGCCAGAGTAAATTCCGGCATGTTTTTGGGCAAGCGGTGAAAGCGGATCAAAGTTATGATGATATCCGGGTTTCCAAAGTGACATGGGACAGTTCCTTCTGTGCAGTTAACCCAAAGTTTCTGGCGGTTATAGTGGAGTCCAGTGGAGGCGGGTCCTTTCTGGTTCTGCCGCTCTCAAAGGTGGGTCGAGTGGACAAAAACTACCCTCTAGTGATTGGACACTCGGGGCCTGTTCTGGACATTGACTGGTGTCCTCACAATGACAATATACTGGCCAGCTGCTCCGAAGACACCACTGCCATGGTATGGCAGATCCCTGACCACACTCCCTCTCGTCCCATCAGTGAGCCCATTGTGGTGCTGGAGGCTCACTCTAAACGCGTGGGCATCATTAAATGGCACCCCACTGCCCGCAACATACTTCTCACTGCAGGCAGTGATAATCTGATCATCATCTGGAATGTGGGCACTGGAGAACCCTTGATCACAATGGATGATCATCCTGATCTCATCTATAATGTCAGCTGGAACTACAACGGTAGCCTGTTCTGCACCACCTGCAAGGACCGGCGCCTCCGAGTGTGCGATCCCCGGAAAAACGAGGTGGTGGCGGAAAGACTGTCCCCACATGAGGGTATCCGGCCAATGAGAGCCATTTTTACAAAAGAGGGCAACATTTTCACCACAGGTTTCACCAGGATGAGCCAGAGAGAGCTTGGCCTGTGGGATCCGACTAATTTTGAAGAGCCCATAGCATTACTGGAGTTGGACACAAGTAATGGAGTTTTATTGCCTTTTTATGATCCAGACACTAACATAGTGTATCTCAGTGGCAAGGGTGACAGCAGTATTCGGTATTTTGAGATCACAGAGGAGCCTCCCTATGTGCATTACATCAGCACATTCAGCAGCAAGGAGCCACAGAGAGGAATGGGCTTCATGCCCAAGAGAGGAGTGGACGTCAGCAAGTGTGAGATTGCCAGATTATATAAACTCCATGAAAGAAAGTGTGAGCCTATTATGATGACAGTACCCAGAAAGTCGGACCTGTTCCAGGATGATCTGTACCCAGACACAGCAGGCCCAGAGCCGGCTCTGGAACCTGAAGAATGGATTGATGGACGAGACGCAGACCCCATTTTAGTGTCCATGAGGGATGGCTATGTTCCTCCAAAGAGTAGGGAGCTAAAGGTGTCCAAGAAGAATGTTTTAGACACCAGACCTACAACACGTAGAAGCATGTCTGCCGTGGATGGAAGTAGTTTGCCTCCTCAGTTGTTGGAGAAGCTTGTTGAGGAGATCCAAAATCTGAAGGCCACAGTTCTTTCTCAGGAGAAACGAATCTGTGACTTAGAGAATAAGCTCTCTAAATACACTAATGGCACAGTCTGAATAAAGTTAACTCGTCCTGTACACACTGCGCGATTCACTGCTAACCCCTCACAACTAAAGTATGAGCACAGATTGGCCAAGCCACCTCAACTCACCCCAGAATTTTATCAACAACGTAACTCACTGTGACTTCTTGACTTCACTTGCTTTTTCTAAACGTGAATAAATACATCTATCCGGTAGTTACATTTCAAATCACTAGGATATTTAATTTGGCAAAGGCACTTATAATGCTCGTCCTGATGCTTTGTAgaaaaaattgttaatattgtGTAGTAGTAcacaatattagccattttcCTTAAATGCTTAAGGAATCACAGCAGGATGAATTTACGTCAGCTAGGCAAAACCACCTTCATTTTAGGATTTACAGGTCCTTTGATGTACTTACTGCTTTTTTACCCTTCAGTGCtgacaaaaaatgaaatgtagcTCCAGCTTTCTGTAGTGGTTAACAGTCACAGTGTCTTTGGTAGTCTCTGTGTGAACATACCTCATTGTAAAGACCAGGACATGGGATCAGATGGTAGCATATGTAGCTCTTATTTAGTCGGCTCTGGACAAGCAACATTTATGGCATGAGTATGATATTTCAGGAAAGTAGCGAGCTTAGTAATGCTAATACACTACACGATTTTTGCTGCGCTTTGCACATAACATAACAGATCAGCGACAATTTAgttattaatcacttacccccatgtcattccaaaccggaaatacaatttaagatatcTTAAATGCAAACCGAAAGGGTTGTGACCGTCAAGGTAgagaaatgcatgaaaaacattGTCAGGATACTCCATCTGCCGTCAGTAGTTCAAGTAGATCTGAATGATACAAAGCGATGAGAATAATATTTGTACGCCTTTATACAATAACAAACAATGCTTTTACAGGTTtagaacgacatgggggtaagccATGGATGacgatattttcattttggtgtaGAGTGACCCTTTCACTATTTCACTAGGAGTCcccattttttgtttacaaaaaccATTTGAATTCCTTCGAAATCAAAATGGTGATCCACAAAAAGctatctaaaaaaaaaccagaaacaacaaaaaaagacttaatACGTAGAAGAGATTGGTTGAGATGATGACTTCTCAATATTTCCCTTGCGCATCATGTTTTCCTCTCATTAGCTGTAGGTCATTCTAATGTCATTTCCAGTCAAAACACATTTCGCACCGAAAGATTTTTACAGTCTCAGACAGGCCCAGATATTTAGCTGGCTAATTACTTCTCAGGCATCAGTGCTTTTTTCAGATTGCGTTTTTCCTCTATGACCTCACATTCGATAACACTCACATAAACAAGCTTCGACTTGCTTAGATTTTTTGGCTGACCTACAGAAAAATCATCTTGTTGGTGATCTCCAGAAAAATAGGGCCTAAAATCGTGTAGTGTATATCCAGATTGAGATTTCTGTCCATCAGTTCTTGCCATTTTATTGTagtagttcaccccaaaatgaagtATTCTTGTTATACTAaccctcatattgttccaaactattcttttttttaataaaatataaaagtggtTGCTaaatgtccaagctgctcttttccatacaatgaatgTGACTCCAAAAAGTAACAAAAGTGGTCCGTGTGACTCATGCTCTATATACCAAATGTTCTGAAGGCTTCCAAGAACTTTTTTGGGGAACAAACATGGCATCACAAGATGCATCATGCCATCAGCAACTAAAGATGATAAGTTGAGGTTCGTGCGCAACAGATTTCGTATatctaaacatctttaaaacaaaacaagcacatATTCTGTTTAAGATCTATATCTACTTTTGGTCTGTTCTTCATAAATAACTATGCGTAGACGTGACGTATAGTGTAAATACGTATTAGTATtttgtttacactttattttgtgttcttgttacagtgcaattataacattaattacattatctGTGTATTTACAATATGGTTAGGGttatgcatgtaattatgcataattgtttgttattataatagttttaattaaaatagtgtGTAACATGTGTAACAagcacaccttaaaataaagtgttacctatacttttactttttctcaCCTTTGTGCAATAAAAGTGtgagaaacatttcaaaaagaaaacagcgtGAACATTCTAGATgagattaaaatgtatgtagataaatgaagacagaattttcatctTTGGGTGAACATTTCCTTAAGGCAGGTGGCTCCTGGTACAGTCTTTATATAAGGTATAGTGCAGGccaatgattaatcgcatccataataaaagtttttattta

Function

symbol description
coro6 Predicted to enable actin filament binding activity. Predicted to be involved in actin filament organization and cell migration. Orthologous to human CORO6 (coronin 6).

NR:

description
PREDICTED: coronin-6

GO: NA

KEGG:

id description
K13886 CORO1B_1C_6; coronin-1B/1C/6

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043221733.1 True 3925 mRNA 0.41 11 12267276 12280107

Neighbor

gene id symbol gene type direction distance location
LOC122326656 LOC107689200,LOC107590078,LOC107721414 coding downstream 215 12262664 ~ 12267061 (-)
pdk3b LOC107588762,LOC107590079,LOC107685479,LOC108431348,LOC108278474 coding downstream 31091 12228678 ~ 12236185 (-)
LOC122326744 spag16,LOC107590107,LOC107685498,LOC107748120 coding downstream 69383 12195790 ~ 12197893 (-)
ccdc82 ccdc82,LOC107590081,LOC107689195,LOC107721402,LOC107748113,LOC107588764,LOC107685481 coding downstream 74389 12187923 ~ 12192887 (-)
trnac-gca_120 NA coding downstream 81675 12185530 ~ 12185601 (-)
ssh2b LOC107721401,LOC107689202,LOC107728952,LOC107685475,LOC107588757 coding upstream 1510 12281617 ~ 12306251 (-)
LOC122326761 or115-7,LOC107739910 coding upstream 64154 12344261 ~ 12345202 (-)
LOC122326762 si:ch211-218m3.18,or115-2,or115-7,si:ch211-218m3.9,LOC107739910 coding upstream 77259 12357366 ~ 12358304 (-)
LOC122326760 si:ch211-218m3.18,or115-2,or115-6,LOC107739910,LOC107655715 coding upstream 84869 12364976 ~ 12368346 (-)
LOC122326751 or115-5,LOC107655716 coding upstream 105417 12385524 ~ 12387888 (-)
G145881 NA non-coding downstream 43696 12218058 ~ 12223580 (-)
G145874 NA non-coding downstream 73864 12193086 ~ 12193412 (-)
G145837 LOC107590070,LOC107721412,LOC107685485,LOC107588766,LOC107689194 non-coding downstream 83207 12180518 ~ 12184069 (-)
G145835 NA non-coding downstream 88231 12177303 ~ 12179045 (-)
G145829 LOC107590069,LOC107689193 non-coding downstream 109332 12155330 ~ 12157944 (-)
LOC122326242 NA non-coding upstream 31815 12311922 ~ 12313144 (-)
LOC122327021 NA non-coding upstream 32023 12312130 ~ 12312203 (-)
LOC122327022 NA non-coding upstream 32246 12312353 ~ 12312426 (-)
LOC122327023 NA non-coding upstream 32468 12312575 ~ 12312648 (-)
LOC122327024 NA non-coding upstream 32692 12312799 ~ 12312872 (-)
LOC122326615 LOC101885612 other downstream 105609 12158672 ~ 12161667 (-)
rgs14b LOC107721394,LOC107590127,LOC107689186,LOC107748103,LOC107588771 other downstream 209669 12012211 ~ 12057607 (-)
cnot6a cnot6a,LOC107756798,LOC107689185,LOC107590062,LOC107566218,LOC107749911,LOC108441023,LOC107667594 other downstream 282204 11972216 ~ 11985072 (-)
LOC122326065 clk4b,LOC107673840,LOC107756806,LOC107667599,LOC107570696,LOC107749918 other downstream 454693 11806824 ~ 11812583 (-)
si:dkey-22f5.9 si:dkey-22f5.9 other downstream 1318908 10911230 ~ 10948368 (-)
G145910 NA other upstream 94739 12374846 ~ 12375545 (-)
LOC122326748 LOC107739910 other upstream 202106 12482213 ~ 12483164 (-)
G146159 NA other upstream 803017 13083124 ~ 13083494 (-)
LOC122326016 NA other upstream 820009 13100116 ~ 13101521 (-)
LOC122326201 cox7b,LOC107713147,LOC107582003,LOC107675192,LOC107697350,LOC107726769,LOC107598778 other upstream 1586308 13866415 ~ 13867643 (-)

Expression


Co-expression Network