LOC122326656 (LOC107689200,LOC107590078,LOC107721414)


Basic Information

Item Value
gene id LOC122326656
gene name LOC107689200,LOC107590078,LOC107721414
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 12262664 ~ 12267061 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043221731.1
tgcatgtgtatttatatatacataataaatatacaaagtatgCACACATTTAAGTAcacaaaaaaacgtattttggaTAAATCGTTTCCcagcactaatataaacattgaaaaaatgtaaatctagtGAGCAAGAAATGTTTGCATAGATAACATCTCCATTTGTCTCTCTTTGTAAGAGTGCTTGCATTATTTACTCTTAAATTGCTACTAACCTCTCACTTTACACACCTCTGCATTTTCCAGCGTTGACCAAcacttttaacaattaaaactCACGTGGCttctatttaacattttaaaatgtaaatattattctaaaaaaaaaacaaacatgaaaaacggcaaaatatcaaaaccaaaggcattgttttgtgtttatgtagAGGATCATTGTCAGTATAATAgtttgaataaaacaatttttgtacaaaaaaaattgttgcatTCAGTCACTTCCTCATAAAAATGAATGGACAAGACACATCCACCACAGTTAATTAGTCTCTGCAAGTTATTTCAAGGCACAGAGCAAACACTGTCTCTGTTGGGTTTTTAGTTATAGGACCATAGAGCtagcactttttatatataaacaatccAGGAACAAAGGGTACTGATTTGGGTGCAATATCCTCAAGGTCTCTTACCTATTCAAATAGCAAGCTGTTAATGGTCACTTTTTAATGCGTTCCACCTCAGTAGTACTTTAAATGCATTCTGAAGGCAGCAAAGGAAAGAAATGCTTGAAATTTAGACTTTCAATTGGCAAAACCTCTGTAAGTTCCATTAGACTGTTATTtcactacttttttttatatctaacaGCGGTCTGTGGATTAAAGTATTGTTAATGATTTCTGTTAATGATTTCTTAAAGAAGGGGGAGCAGTGATGTTTGCTATGGGTTATGGAAGGAGGTGCAAGTCCATTAAGGCTGACATCCTAGTGAGAGTAGAACAGAACATTTAGTTTAAAGATACTGAGTTTTTCCACTTCACTTGAGAAAACCTTTGCTCTCCAACCTCAGGTTGGTTCCTTGTGCCAGTGGTTAGACCTACAGATTACAGATTTCAGAGCAATGTGGAATTTATTCCTCTGCCTTTTACCTTGTCTGCTGCTGGTCCTGGTTACAATATTACGTCGATGGAACTTGATCAGTCGTCTTGCAGATAGTACTGTTCTGCTGTTGGGTCGCTGTTTGTGGATTATGGCCTGTAGACTCTTGAAACTGCCATGCTTTACAGTATCAGGATCAATAGAAGTCAGACTGATCTGTAAACCCACAGCTCTTGCCATTCACCTGAAGAAACACTGCTATACTTTGGCCCAGCCTCCTTTAGCAAGATGGCCTCAGGCCGACCCTCATTTTCAGACAATTACCAATCTCATGTTGCCCACAAAGGAAGGCGCTGAACAGCAAGGAGGAGTACACTTTACACGGGATAACCTACTTCTAAAGGATGGGGGTATTGTGGCCCTGGACTGGGCTGTGAGTTTGACCGACCAACAAGCTCAGACCAAAAGAGATCATCATCCTGGAGGAAGGTTACTGGTTACTAGTAATCCTGCTATTGTTGTTATAATTCCCAATGCCCTAGGCAGAGTAACTCCACACTTGCTCATGTTGTGCTACAAGGCTTTGCAACAGGGTTTCTATCCAGTGATTTTCCATCGACGTGGTCATGGTGGCTGCCCACTGACTACTCCATACTACCAGGAGTTCGGAAATACTTCTGATTTTGTGCAAGCAATAGAACACTTGCGGAGTCATCATCCATCCTCAACTTTGCTTGCTGTAAGTGAGGGCTCGGGATCAGGGTTACTGCTTTCCTATCTGGGGGAATGTGGCTCTTCATCCTACCTGACGGCCGCTGCTTGCATCTCTCCTGTGTTTCATGGACAACTGTGGTTTGAGTATGAGCTACCTTGGCTTTATCAGTGGATAGCCCTCATCTACCGCAAGTTTCAAATAAACAGGTACGCCACTGCTTTGAGCTCTGTGATGGATGTAGCAAAAATTCTACAATGCAACTCCTTGCGAGATATGGAGGAACTCATGTTCTGTGCTCCTAAGCAGTCTGAGCAAAGAATGTTAGACATAGGGGACAATGTTGGAAAGGACAATTCAAGATTATCGGTGAAGCCTGACTGGCCAAGTTACTGGGAGAGGAATTAACCTTTACGAGATGCAGACGAAGTAGCAGTGCCAGTGCTCTGTTTGTGTAGCCGAGATGACCCTCTTGTTCCACCTCTCTCCACTGTACCTGAGGGACTTTTTCGTAATAGCCCTTACTTCCTGCTGGCTGTGACGCAACAGGGAGGACACTGCAGCTTTATGCATGACGATGGTCATGGAGGTACTACTTCCTGGAGTCATTGTGTGGTGCTGGAATACTTTAGGGTAGTTGCTGATTTCTTCAGGGCAGAGGAAAAGAAAGGCTTCAAAGATGTTACTGCACAATGTGGCAACCAAAGTCTGAGGCATAGCGCCAGTGCTGTGCTTTCCAGAAGAAGAACAACCTTGCTCCGGAAAGAAAGGCCCACCCGAAGACGGCAAACCTCAACTCCCTCTGACAAATTCACATTTGAAGAGGAACAGGAGGATTTTACTTGGAATCGATCCTACACACGCTGAGTAAGGGAAGCATGTGGAACCATAAAGGTCAGATCAGCAGAGCTTAAAACGTTCTACCAGTACGTCTAAGAAATATGAGATGCCCTTAGTTAGGAAACCCAtcgtgctttgatgcaaccagtgttgttaaaagcgctatataaataaaaatgactgattgaaaccacagttttgcagaaatgagCAAGGAGGACACCATGCAAGATAAAAGGGAAGAAAACGCAAAGAACATGTTGATAGACAAAATGGGCTTAATTATGTTGACAGCATTGGATGCTATATTTAGtcctttttttgtacaaattatGTTGgaacatgaaaatgattttcagaaaAGTTTGCACTTGCTAACAATGCATTAAAGCatacaaatgacaaaaccaaaatgtactaaaattactttattacaGTTGATTTGTTTGTCCAGTAGCCCTCTGCCAACAAAAGGagtaattacaaacaaaacattacatttgtcCCCTTACgttttcataatttttgtatattttaattcactTGTAAGTGTTTTGTTATGAATAGCCATAATTTTTGTAATCTCTCCAACATTCAGTTTTTCACAatctatacattttaatacaggTTATATATGGATTGCTATGGTAATGTTGAAGCAGGAAAACAAGACAACGACCATCAAAAGAAAAAGGTTGAAATACTGGTAAACTCACTGTACAGAGATGTACCCCcttctttaattattattcaccCTGTTGTTTTCACACAAGGATGCTATGAGCTAAAGAAATCTGCTCTTTTATAACAGGACAGGACACACCTCTTGTATTTGGAAAATACTGCATGACCCTGTTTGTGAGCGTAAACTCACATTTTGAGTCTATGGCTGTTCCTGTGGTCCAGTGATTCCACTGGAGTAATGAATGTGATTAAATGATTGGCATGTTATATAGCATTTAC

Function

NR:

description
PREDICTED: protein ABHD15-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043221731.1 True 3573 mRNA 0.40 2 12262664 12267061

Neighbor

gene id symbol gene type direction distance location
pdk3b LOC107588762,LOC107590079,LOC107685479,LOC108431348,LOC108278474 coding downstream 26479 12228678 ~ 12236185 (-)
LOC122326744 spag16,LOC107590107,LOC107685498,LOC107748120 coding downstream 64771 12195790 ~ 12197893 (-)
ccdc82 ccdc82,LOC107590081,LOC107689195,LOC107721402,LOC107748113,LOC107588764,LOC107685481 coding downstream 69777 12187923 ~ 12192887 (-)
trnac-gca_120 NA coding downstream 77063 12185530 ~ 12185601 (-)
rbm22 rbm22,LOC107689188,LOC107685490,LOC107590066,LOC107748105 coding downstream 183092 12075451 ~ 12079572 (-)
coro6 coro6,LOC107685477,LOC107588759,LOC107721413,LOC107728955,LOC107590076,LOC107689201 coding upstream 215 12267276 ~ 12280107 (-)
ssh2b LOC107721401,LOC107689202,LOC107728952,LOC107685475,LOC107588757 coding upstream 14556 12281617 ~ 12306251 (-)
LOC122326761 or115-7,LOC107739910 coding upstream 77200 12344261 ~ 12345202 (-)
LOC122326762 si:ch211-218m3.18,or115-2,or115-7,si:ch211-218m3.9,LOC107739910 coding upstream 90305 12357366 ~ 12358304 (-)
LOC122326760 si:ch211-218m3.18,or115-2,or115-6,LOC107739910,LOC107655715 coding upstream 97915 12364976 ~ 12368346 (-)
G145881 NA non-coding downstream 39084 12218058 ~ 12223580 (-)
G145874 NA non-coding downstream 69252 12193086 ~ 12193412 (-)
G145837 LOC107590070,LOC107721412,LOC107685485,LOC107588766,LOC107689194 non-coding downstream 78595 12180518 ~ 12184069 (-)
G145835 NA non-coding downstream 83619 12177303 ~ 12179045 (-)
G145829 LOC107590069,LOC107689193 non-coding downstream 104720 12155330 ~ 12157944 (-)
LOC122326242 NA non-coding upstream 44861 12311922 ~ 12313144 (-)
LOC122327021 NA non-coding upstream 45069 12312130 ~ 12312203 (-)
LOC122327022 NA non-coding upstream 45292 12312353 ~ 12312426 (-)
LOC122327023 NA non-coding upstream 45514 12312575 ~ 12312648 (-)
LOC122327024 NA non-coding upstream 45738 12312799 ~ 12312872 (-)
LOC122326615 LOC101885612 other downstream 100997 12158672 ~ 12161667 (-)
rgs14b LOC107721394,LOC107590127,LOC107689186,LOC107748103,LOC107588771 other downstream 205057 12012211 ~ 12057607 (-)
cnot6a cnot6a,LOC107756798,LOC107689185,LOC107590062,LOC107566218,LOC107749911,LOC108441023,LOC107667594 other downstream 277592 11972216 ~ 11985072 (-)
LOC122326065 clk4b,LOC107673840,LOC107756806,LOC107667599,LOC107570696,LOC107749918 other downstream 450081 11806824 ~ 11812583 (-)
si:dkey-22f5.9 si:dkey-22f5.9 other downstream 1314296 10911230 ~ 10948368 (-)
G145910 NA other upstream 107785 12374846 ~ 12375545 (-)
LOC122326748 LOC107739910 other upstream 215152 12482213 ~ 12483164 (-)
G146159 NA other upstream 816063 13083124 ~ 13083494 (-)
LOC122326016 NA other upstream 833055 13100116 ~ 13101521 (-)
LOC122326201 cox7b,LOC107713147,LOC107582003,LOC107675192,LOC107697350,LOC107726769,LOC107598778 other upstream 1599354 13866415 ~ 13867643 (-)

Expression


Co-expression Network