G147982


Basic Information

Item Value
gene id G147982
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 718919 ~ 722583 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU218688
ttttttttttttttttttttATTGGtccaaatgattttattaaaaaatgtcatctcAGGATAAATGTAAACCAGTTTAAACACCATCTAAAAATCAGCGGTTCAGTTCATCTGTAACACAAACTCGACTACATGTAAAACTCTGTTCTAGAGGATCCGTGACGAGCAGCGCTGAATATGACACGCGTGATCAGGTTTGTTCAGAGGCAGACAAGCAAcattgtccattttttttttttttagcacacaAGATCTGCTCTCCTTTAGCGTCTCAAGAGGAGCATGCAGGGAAGTGATGTCAGTTCGAGTCCTCCAGGTTGCCGCTCTTTTGGTCAGAGTTGTCGCAGGCGGTCCATGATGCTTTGCAGGCTGGGCTGGACGATGCCCAGCAGGGGTCTCTGGGAAGGGTCTCCGTTCCAGCAGGCCTCCATCAGCTGCCAGCACTCCTCGTCAAACGTGACCAAACGCTCCGGCCGGGAGCC

Function

GO: NA

KEGG:

id description
ko03460 Fanconi anemia pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU218688 True 481 lncRNA 0.47 2 718919 722583

Neighbor

gene id symbol gene type direction distance location
celsr2 celsr2,LOC107690562,LOC107723072,LOC107750703,LOC107656894 coding upstream 535 682162 ~ 718384 (+)
capzb capzb,LOC105897928,LOC106565651,LOC106583096 coding upstream 39778 667553 ~ 679141 (+)
LOC122327913 NA coding upstream 88419 623752 ~ 630500 (+)
LOC122327960 ora4,LOC107722985,LOC107656911,LOC107573771,LOC103385863 coding upstream 113410 602443 ~ 605509 (+)
sdhb sdhb,LOC107656920,LOC107573137,LOC105927147 coding upstream 160048 555883 ~ 558871 (+)
nuak2 nuak2,LOC107722940,LOC107750672,LOC107572355,LOC107690560 coding downstream 17178 739761 ~ 748409 (+)
med20 med20 coding downstream 36132 758715 ~ 761528 (+)
usp49 usp49,LOC107722889,LOC107572367,LOC107656903,LOC107690537,LOC107569748 coding downstream 39086 761669 ~ 768537 (+)
pth4 LOC107723108,LOC107750679 coding downstream 65880 788463 ~ 791147 (+)
elf3 elf3,LOC107572362,LOC107569764,LOC107656900 coding downstream 76225 798808 ~ 801946 (+)
G147938 NA non-coding upstream 141538 559745 ~ 577381 (+)
G147923 NA non-coding upstream 165221 552946 ~ 553698 (+)
G147942 slc25a34 non-coding upstream 187385 530567 ~ 531534 (+)
G147939 NA non-coding upstream 196197 522459 ~ 522722 (+)
G147905 NA non-coding upstream 247374 471068 ~ 471545 (+)
G147898 NA non-coding downstream 2086 724669 ~ 726246 (+)
G147984 NA non-coding downstream 26465 749048 ~ 749647 (+)
LOC122328050 NA non-coding downstream 102568 825151 ~ 829115 (+)
G148002 NA non-coding downstream 170006 892589 ~ 893223 (+)
G148033 NA non-coding downstream 286807 1009390 ~ 1011636 (+)
G147937 NA other upstream 59305 653880 ~ 659614 (+)
G147956 NA other upstream 95552 622483 ~ 623367 (+)
mfap2 mfap2 other upstream 154698 559004 ~ 564221 (+)
G147868 zgc:66156,wu:fd14a01,LOC103138443,LOC103360557,LOC103360549,LOC107705004,LOC107681327,LOC107575389,LOC107571573,LOC108261437,LOC108261476 other upstream 281574 345925 ~ 437345 (+)
G147896 NA other downstream 3817 726400 ~ 726767 (+)
G147985 LOC107723118,LOC107656907,LOC107572366 other downstream 27696 750279 ~ 751509 (+)
G147888 LOC107732183,LOC107723096,LOC107572363,LOC107698292,LOC107750676,LOC107656899 other downstream 68651 791234 ~ 794006 (+)
G148214 wdr77 other downstream 293196 1015779 ~ 1016667 (+)
G148233 LOC107571167,LOC107662825,LOC107663547 other downstream 402903 1125486 ~ 1127230 (+)

Expression


Co-expression Network