LOC122327510 (LOC107575212,LOC107667503)


Basic Information

Item Value
gene id LOC122327510
gene name LOC107575212,LOC107667503
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 5124043 ~ 5126458 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043222928.1
TCGACCTCTACAACATCACTTAGGCTATCTATAATGAAAAGTACAAATCTGGTGACCTTTAGGAGAAATTTTGCAACTTAAAAGGTTATACTGGAGACGAATGAGAAGAAAATGCTTTTCCTGTTTGCCTTGCTTTATTATTCGTGGCGTCTCGATGGTGTGTTTGGCGCTGAGACGGATGAAGTAAAGTCCGTGTCGGTGATGGAGGGAGAATCTGTCTCACTAAACACTGATGTTACTGTGACACAGAGGATACTGTGGAAGTTTGGAGGTCAAGGTGTTCTCATAGCTCTCTTAGATGACAACGAGGTCACATTATACAACGGTACTGAAGGACGGTTCAGAGACAGACTGCAGCTGGATCCTCAAaccggatctctgaccatcgtgaacaccagaaccacagactctggactCTATGAACTAAACGGCAGAGGAGGGTCAGGGGACCGAGTCAAGAAATTCAATCTTACAGTGTACTctCGTCTACTCATTCCTGTCATCCGCAGAGACTCTTCACAatgttcatcatcatcatcttcatcatcttgtTCATTGTTGTGTTCAGTGGTGAACGtgagtcatgtgactctctcctggtacaaaggaaacagtttattgtccagcatcgGTGTGTCTCGTGTCACCAGCAGCGTCTCTTTACATCTGGAGGTGGaatatcaggataaaaacacctacagctgtgtgatcaacaaccccatcagaaaccagaccacacatctgGACATCAGCAAACTCTGTCACACATGTCCAGAAATTCACTGTTGCGGTGTTACTGAAGCTGTGATCCGATTGGCCATCACTGCTCTGGTGGGCGTGGCTGTTGTTGCTTTTGTAGTTTATGACATCAGATCCAGAAATGCATTGTAAAGTTCTGTACTTTGTAAATCTGCTCTGCAACAACGTGTGGTAACAAGCACTATAAATACTGTactgcaatattaatatttgatatgcACTGTACCTCATTCTTAATTGAAGGATTGTAACTAGCTCAATCAAAACTAACCTCTTGTGAGAACTGTCCACATTCTTCTCCCATgctatttttggaaaaatgaagTAACGTGCTTTGGTTTAACGTGCTTCTACTAGAACAAACACTGGTAAACAGTGTCACATGAAACCGAAGTTCTCAGTAGCTACTTGTGGCTACTGAGGTTTCTGCTTATTTGCACGTGATGTAAGAAGAAGTGTGCAAAGCAGAGCAGAAactatgcagttttttttcactATTGCGTTCTCCAAATTTGATTTTGCAACACGACGGCCAAATACACGAATAATCACCTGGTCAATTTAAAAAACTGTccccttaaaaaaaagtgatgtgtGCTTCCAGGACATTTTGCCACAATATCATTGAAGATCCCCAGGTGATCACACACTGCTTGCACACGGATGACTGGATAACTCTTCCTGCAAATGGACAAGGGTTTATTTAccatttgcattgcatttgtgCAATGTTGTGCAACTTTTTGAATGTACTGCCTAATTTCTTGAGTTCTAGAGAATGTCAGCATGTTCTTCAAAAGCTCTAACAGTAAAAGTAGTCCCTTTAGTTCCCTCAGGGTGGCCAAAACTTTCTCTTCCTCTGCGGCCAGAGGAGGAACAGAATCAGCACCACCACTAGTCTTATCTGCTTCTCTATTTATTTTCCCTTAGATAGATCACAGCTTAACCACagtatgattttattctttattaagGAAATTAATGGGATATTGTCAACTGTTTCCTGAAAGAGTAGTTCCCTTTCGAAACACACTGCTCAGAGGGAACTTGGTTTTCTCTGAATATTGAAGCCTGATTACATTTTACTGCACAAACCTA
>XM_043222929.1
TCGACCTCTACAACATCACTTAGGCTATCTATAATGAAAAGTACAAATCTGGTGACCTTTAGGAGAAATTTTGCAACTTAAAAGGTTATACTGGAGACGAATGAGAAGAAAATGCTTTTCCTGTTTGCCTTGCTTTATTATTCGTGGCGTCTCGATGGTGTGTTTGGCGCTGAGACGGATGAAGTAAAGTCCGTGTCGGTGATGGAGGGAGAATCTGTCTCACTAAACACTGATGTTACTGTGACACAGAGGATACTGTGGAAGTTTGGAGGTCAAGGTGTTCTCATAGCTCTCTTAGATGACAACGAGGTCACATTATACAACGGTACTGAAGGACGGTTCAGAGACAGACTGCAGCTGGATCCTCAAaccggatctctgaccatcgtgaacaccagaaccacagactctggactCTATGAACTAAACGGCAGAGGAGGGTCAGGGGACCGAGTCAAGAAATTCAATCTTACAGTGTACTTGGTGAACGtgagtcatgtgactctctcctggtacaaaggaaacagtttattgtccagcatcgGTGTGTCTCGTGTCACCAGCAGCGTCTCTTTACATCTGGAGGTGGaatatcaggataaaaacacctacagctgtgtgatcaacaaccccatcagaaaccagaccacacatctgGACATCAGCAAACTCTGTCACACATGTCCAGAAATTCACTGTTGCGGTGTTACTGAAGCTGTGATCCGATTGGCCATCACTGCTCTGGTGGGCGTGGCTGTTGTTGCTTTTGTAGTTTATGACATCAGATCCAGAAATGCATTGTAAAGTTCTGTACTTTGTAAATCTGCTCTGCAACAACGTGTGGTAACAAGCACTATAAATACTGTactgcaatattaatatttgatatgcACTGTACCTCATTCTTAATTGAAGGATTGTAACTAGCTCAATCAAAACTAACCTCTTGTGAGAACTGTCCACATTCTTCTCCCATgctatttttggaaaaatgaagTAACGTGCTTTGGTTTAACGTGCTTCTACTAGAACAAACACTGGTAAACAGTGTCACATGAAACCGAAGTTCTCAGTAGCTACTTGTGGCTACTGAGGTTTCTGCTTATTTGCACGTGATGTAAGAAGAAGTGTGCAAAGCAGAGCAGAAactatgcagttttttttcactATTGCGTTCTCCAAATTTGATTTTGCAACACGACGGCCAAATACACGAATAATCACCTGGTCAATTTAAAAAACTGTccccttaaaaaaaagtgatgtgtGCTTCCAGGACATTTTGCCACAATATCATTGAAGATCCCCAGGTGATCACACACTGCTTGCACACGGATGACTGGATAACTCTTCCTGCAAATGGACAAGGGTTTATTTAccatttgcattgcatttgtgCAATGTTGTGCAACTTTTTGAATGTACTGCCTAATTTCTTGAGTTCTAGAGAATGTCAGCATGTTCTTCAAAAGCTCTAACAGTAAAAGTAGTCCCTTTAGTTCCCTCAGGGTGGCCAAAACTTTCTCTTCCTCTGCGGCCAGAGGAGGAACAGAATCAGCACCACCACTAGTCTTATCTGCTTCTCTATTTATTTTCCCTTAGATAGATCACAGCTTAACCACagtatgattttattctttattaagGAAATTAATGGGATATTGTCAACTGTTTCCTGAAAGAGTAGTTCCCTTTCGAAACACACTGCTCAGAGGGAACTTGGTTTTCTCTGAATATTGAAGCCTGATTACATTTTACTGCACAAACCTA

Function

NR:

description
PREDICTED: uncharacterized protein LOC107575212

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043222928.1 True 1857 mRNA 0.42 4 5124043 5126458
XM_043222929.1 False 1770 mRNA 0.42 4 5124043 5126458

Neighbor

gene id symbol gene type direction distance location
LOC122327536 NA coding upstream 9023 5111091 ~ 5115020 (+)
LOC122328165 NA coding upstream 19086 5087434 ~ 5104957 (+)
LOC122327554 LOC107694397,LOC107570142,LOC107566360 coding upstream 70839 5043904 ~ 5053204 (+)
LOC122327500 cela1,zgc:92041,LOC107727187,LOC107566436,LOC107721235,LOC107570146 coding upstream 81942 5039894 ~ 5042101 (+)
LOC122328162 NA coding upstream 120368 5002735 ~ 5003675 (+)
LOC122327397 NA coding downstream 886 5127344 ~ 5134945 (+)
LOC122327451 NA coding downstream 8622 5135080 ~ 5140253 (+)
LOC122327549 NA coding downstream 28036 5154494 ~ 5156419 (+)
LOC122327387 NA coding downstream 31922 5158380 ~ 5161143 (+)
si:dkey-182g1.2 NA coding downstream 35343 5161801 ~ 5171510 (+)
G149641 NA non-coding upstream 49415 5073993 ~ 5074628 (+)
G149627 NA non-coding upstream 54043 4973734 ~ 5070000 (+)
G149624 LOC107720998,LOC107653181 non-coding upstream 141857 4944699 ~ 4982186 (+)
G149615 NA non-coding upstream 321966 4798640 ~ 4802077 (+)
G149400 gpd1b,LOC107721242,LOC107727040,LOC107698578,LOC107566434 non-coding upstream 346862 4773476 ~ 4777181 (+)
G149720 NA non-coding downstream 310379 5436837 ~ 5438435 (+)
G149729 NA non-coding downstream 359883 5486341 ~ 5494990 (+)
G149733 NA non-coding downstream 405407 5531865 ~ 5532831 (+)
G149762 NA non-coding downstream 483339 5609797 ~ 5610816 (+)
G149786 NA non-coding downstream 527225 5653683 ~ 5653887 (+)
LOC122327529 NA other upstream 16619 5103493 ~ 5107424 (+)
G149646 NA other upstream 19607 5103529 ~ 5104436 (+)
LOC122328161 NA other upstream 125069 4992011 ~ 4998974 (+)
LOC122327412 LOC107698560 other upstream 393343 4698192 ~ 4730700 (+)
LOC122327517 NA other upstream 408040 4712862 ~ 4716003 (+)
LOC122327380 NA other downstream 59732 5186190 ~ 5204364 (+)
LOC122327428 NA other downstream 326707 5453165 ~ 5457356 (+)
LOC122327321 NA other downstream 607950 5734408 ~ 5745051 (+)
rad54l2 rad54l2,LOC107756013,LOC107695610,LOC107593093 other downstream 645877 5772335 ~ 5789390 (+)
tusc2b tusc2,tusc2b,LOC107587002,LOC107593101,LOC107695626 other downstream 677268 5803726 ~ 5806623 (+)

Expression


Co-expression Network