LOC122328165


Basic Information

Item Value
gene id LOC122328165
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 5087434 ~ 5104957 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223870.1
ATGGCTGgtgtgtttggtgtAGATTCGGTGAAGTCAGTGTTGGAGGGAGATTCTGTTACTCTAAACTCTAATCTTACTCAAATAAAGTCAGACGATGTGGTGATGtggaaatatgaaaacattctgATGGCTAAAATCAATGGGAAGGACAAAAAGAGCAGGGTTTATAATGAAAGTGCTGAGGGTAGATTCAGAggcagactgaagctggatcagactggatctctgatcATCACAAACACCagaaccacagactctggactttataAAGTCTCCAGCAAAAACTCAGGCATCAACATCTTCAGACTTACTGTCTACGCTCATCTGCCTGTTCCTGTTATTATCGGAGACTCTTCACaaaattcatcatcatcatcatcatcatcttgttCTTTGTTGTGTTCGGCGGTGAACgtgggtcatgtgactctctcctggtacaaaggaaacagtttattgtccagcatcggtgtgtctgatctcagcacCATTCTCGCTCTACATCTGGAGTGTCTGGATGATTCCTACAGCTGTGTGGTgaacaaccccatcagaaaccagaccacacatctgAACCACACTGAACTCTGTCATCCGTGTTCAGACTGCATTCATTGTTGCGGTTCTACTGAAGCTGTGATCCGATTGGCTCTCTCTGCTCTAGTGGGCGTGGCTACTGTTGCTGTGCTGGTTTACGAAGTCTTCAACAAAAGAGAAGATAACAGACATTGCTGTGTGTTTGGTGCTGATGAAGTGAAGACCGTATCAGCGAGGAAGGGAGAGTCTGTCACTCTGAACAGTGGTGTTACAGAAGCGCACAAATATTTTCTCATACAGTGGACGTTTGGAAGCACGCGGATAGCTGAAGTCAACAGATTTAAGCAGACCAACTCGACATATGGTGGTCCTGATGAGAggttcagagacagactgatgctggatcagactggatctctgaccgtCACAGACACCAGAACCGcagactctggactttataAACTAACAATTGTCAACAGAGATACCATTTACATCAGTTACAATGTTGGACTAtag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223870.1 True 1053 mRNA 0.45 6 5087434 5104957

Neighbor

gene id symbol gene type direction distance location
LOC122327554 LOC107694397,LOC107570142,LOC107566360 coding upstream 34230 5043904 ~ 5053204 (+)
LOC122327500 cela1,zgc:92041,LOC107727187,LOC107566436,LOC107721235,LOC107570146 coding upstream 45333 5039894 ~ 5042101 (+)
LOC122328162 NA coding upstream 83759 5002735 ~ 5003675 (+)
LOC122327502 cela1,zgc:92041,LOC107721235,LOC107570146,LOC107727187,LOC107566436 coding upstream 147630 4932444 ~ 4939804 (+)
LOC122327573 NA coding upstream 363671 4721254 ~ 4723763 (+)
LOC122327536 NA coding downstream 6134 5111091 ~ 5115020 (+)
LOC122327510 LOC107575212,LOC107667503 coding downstream 19086 5124043 ~ 5126458 (+)
LOC122327397 NA coding downstream 22387 5127344 ~ 5134945 (+)
LOC122327451 NA coding downstream 30123 5135080 ~ 5140253 (+)
LOC122327549 NA coding downstream 49537 5154494 ~ 5156419 (+)
G149641 NA non-coding upstream 12806 5073993 ~ 5074628 (+)
G149627 NA non-coding upstream 17434 4973734 ~ 5070000 (+)
G149624 LOC107720998,LOC107653181 non-coding upstream 105248 4944699 ~ 4982186 (+)
G149615 NA non-coding upstream 285357 4798640 ~ 4802077 (+)
G149400 gpd1b,LOC107721242,LOC107727040,LOC107698578,LOC107566434 non-coding upstream 310253 4773476 ~ 4777181 (+)
G149720 NA non-coding downstream 331880 5436837 ~ 5438435 (+)
G149729 NA non-coding downstream 381384 5486341 ~ 5494990 (+)
G149733 NA non-coding downstream 426908 5531865 ~ 5532831 (+)
G149762 NA non-coding downstream 504840 5609797 ~ 5610816 (+)
G149786 NA non-coding downstream 548726 5653683 ~ 5653887 (+)
LOC122328161 NA other upstream 88460 4992011 ~ 4998974 (+)
LOC122327412 LOC107698560 other upstream 356734 4698192 ~ 4730700 (+)
LOC122327517 NA other upstream 371431 4712862 ~ 4716003 (+)
LOC122327552 LOC107568440,LOC107698560 other upstream 666433 4419563 ~ 4421001 (+)
LOC122327447 LOC107741386,LOC107568440 other upstream 846647 4213226 ~ 4240787 (+)
LOC122327380 NA other downstream 81233 5186190 ~ 5204364 (+)
LOC122327428 NA other downstream 348208 5453165 ~ 5457356 (+)
LOC122327321 NA other downstream 629451 5734408 ~ 5745051 (+)
rad54l2 rad54l2,LOC107756013,LOC107695610,LOC107593093 other downstream 667378 5772335 ~ 5789390 (+)
tusc2b tusc2,tusc2b,LOC107587002,LOC107593101,LOC107695626 other downstream 698769 5803726 ~ 5806623 (+)

Expression


Co-expression Network