glrx2 (glrx2,LOC107664942,LOC107560687)


Basic Information

Item Value
gene id glrx2
gene name glrx2,LOC107664942,LOC107560687
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 12019242 ~ 12021636 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223500.1
TGTGTTTTGGACTTtgtagaaaaacagaaaaaagcgGTTTTATGTCGAGCCCGTCTACAaggagacatttttttttatctattcagGCGCTTGTCGTTATTTACACTGCAGGGATGTTGACGAGAGGATGTTTTTACAAATCCATACAGGCGTACCAGACTCTAAGGTCGTCATGGAGAATAATTATTAGACGATATGGTTTAATATAATGGTGTTTAAACAGTTTGTTCCGGTGCAGCGCTAACCTACTTGAGGAGACAAAAGCCACAGGCTGTTTTTAGGGTCATTAAACGTTTAAATCCCCCCTGTGTGATCTGATCAGATTACAGCCTAGCCGTGAGATCCTTGTTAGTCAGTTATTCAGTCGGAACTAAACAGCTAAACAACATGACTGATTTATACTGCCAGTCTAATTCTCTTATATCCTCACTAGCTGCGTTTGCTTTCCTCGTGTCCTCCACATGTCTTTTTTACAGACCAGTGATCATCACAAGGTCGTCTGGCGCGTCAGTCCGAGCCTGTCGTTGTGTGTATCGTGTtgtttttgagtgtgtttcCCCCTCTGTTTTAACCTTAACTTCGTGTCGTTTGTCTAGAATGGGGAACTACTCGTCGGCGTCGCCTGGGTCGTCGAGCTCGGCTTGCTCTCGGTTCGTCCAGGATGTTGTTTCCAGTAACTGCGTTGTAATATTCTCCAAAACCACGTGCCCATACTGTAAGATGGCGAAGAACGTTTTTAATGAGATCGGAGCGACATATAAAGTTGTTGAGCTGGATGAGCACAATGATGGCAGTCGTCTACAGGAGACCTTAGCCCAAATGACAGGCGCCAGAACAGTGCCAAGAGTCTTTATTAACGGGCAGTGCATCGGAGGAGGCACGGATACCAAGCAGCTCCACCAGCAAGGGAAACTTCTTCCTCTTATTGAACAGTGTAGGCCGTGCTGTTCGAGTGCCTCCCCCGAGGCCTCCGGCGGCGCTCAGTATCAACATAATCAGTCATAATGCTCTGTGATATGTGTTTATACTCGTCGGCCACCCTTGAAGAGCCCAAACAGAGGTTAAGTAGATGTGTTTTAACATGCATGCTGCAGTCAGGGAAAATGTACTTTCCTGACTGATCGACATGGGTGCTGTTATTTTTGGGTTATTATGCACTGTATGTTttcttgtaaatatataatgccAAACGGTATCACGCCAAGCATTTTAGATTACTTTCTGACCTGAGTTACAAAACTTCAGCAGTCCtttatgtacataaatatttaaaataaagtattaagtCTTTTGCAAAA
>XM_043223501.1
GTGTCGCAGCGTTCAATGACCAGGACGGGCCGGTGGCGAACCATCGCGGCGACCCGCGGGGGGCGGGGCTTCCTCGCGTCACGCCGATGCGGTTCCGGAATGGGGAACTACTCGTCGGCGTCGCCTGGGTCGTCGAGCTCGGCTTGCTCTCGGTTCGTCCAGGATGTTGTTTCCAGTAACTGCGTTGTAATATTCTCCAAAACCACGTGCCCATACTGTAAGATGGCGAAGAACGTTTTTAATGAGATCGGAGCGACATATAAAGTTGTTGAGCTGGATGAGCACAATGATGGCAGTCGTCTACAGGAGACCTTAGCCCAAATGACAGGCGCCAGAACAGTGCCAAGAGTCTTTATTAACGGGCAGTGCATCGGAGGAGGCACGGATACCAAGCAGCTCCACCAGCAAGGGAAACTTCTTCCTCTTATTGAACAGTGTAGGCCGTGCTGTTCGAGTGCCTCCCCCGAGGCCTCCGGCGGCGCTCAGTATCAACATAATCAGTCATAATGCTCTGTGATATGTGTTTATACTCGTCGGCCACCCTTGAAGAGCCCAAACAGAGGTTAAGTAGATGTGTTTTAACATGCATGCTGCAGTCAGGGAAAATGTACTTTCCTGACTGATCGACATGGGTGCTGTTATTTTTGGGTTATTATGCACTGTATGTTttcttgtaaatatataatgccAAACGGTATCACGCCAAGCATTTTAGATTACTTTCTGACCTGAGTTACAAAACTTCAGCAGTCCtttatgtacataaatatttaaaataaagtattaagtCTTTTGCAAAA
>XM_043223502.1
GTGTGTTTTGGACTTtgtagaaaaacagaaaaaagcgGTTTTATGTCGAGCCCGTCTACAaggagacatttttttttatctattcagGCGCTTGTCGTTATTTACACTGCAGGGATGTTGACGAGAGGATGTTTTTACAAATCCATACAGGCGTACCAGACTCTAAGAATGGGGAACTACTCGTCGGCGTCGCCTGGGTCGTCGAGCTCGGCTTGCTCTCGGTTCGTCCAGGATGTTGTTTCCAGTAACTGCGTTGTAATATTCTCCAAAACCACGTGCCCATACTGTAAGATGGCGAAGAACGTTTTTAATGAGATCGGAGCGACATATAAAGTTGTTGAGCTGGATGAGCACAATGATGGCAGTCGTCTACAGGAGACCTTAGCCCAAATGACAGGCGCCAGAACAGTGCCAAGAGTCTTTATTAACGGGCAGTGCATCGGAGGAGGCACGGATACCAAGCAGCTCCACCAGCAAGGGAAACTTCTTCCTCTTATTGAACAGTGTAGGCCGTGCTGTTCGAGTGCCTCCCCCGAGGCCTCCGGCGGCGCTCAGTATCAACATAATCAGTCATAATGCTCTGTGATATGTGTTTATACTCGTCGGCCACCCTTGAAGAGCCCAAACAGAGGTTAAGTAGATGTGTTTTAACATGCATGCTGCAGTCAGGGAAAATGTACTTTCCTGACTGATCGACATGGGTGCTGTTATTTTTGGGTTATTATGCACTGTATGTTttcttgtaaatatataatgccAAACGGTATCACGCCAAGCATTTTAGATTACTTTCTGACCTGAGTTACAAAACTTCAGCAGTCCtttatgtacataaatatttaaaataaagtattaagtCTTTTGCAAAA
>XM_043223503.1
CGTGTGTTTTGGACTTtgtagaaaaacagaaaaaagcgGTTTTATGTCGAGCCCGTCTACAaggagacatttttttttatctattcagGCGCTTGTCGTTATTTACACTGCAGGGATGTTGACGAGAGGATGTTTTTACAAATCCATACAGGCGTACCAGACTCTAAGGTCGTCATGGAGAATAATTATTAGACGATATGGTTTAATATAATGGTGTTTAAACAGTTTGTTCCGGTGCAGCGCTAACCTACTTGAGGAGACAAAAGCCACAGGCTGTTTTTAGGGTCATTAAACGTTTAAATCCCCCCTGTGTGATCTGATCAGATTACAGCCTAGCCGTGAGATCCTTGTTAGTCAGTTATTCAGTCGGAACTAAACAGCTAAACAACATGACTGATTTATACTGCCAGTCTAATTCTCTTATATCCTCACTAGCTGCGTTTGCTTTCCTCGTGTCCTCCACATGTCTTTTTTACAGACCAGTGATCATCACAAGAATGGGGAACTACTCGTCGGCGTCGCCTGGGTCGTCGAGCTCGGCTTGCTCTCGGTTCGTCCAGGATGTTGTTTCCAGTAACTGCGTTGTAATATTCTCCAAAACCACGTGCCCATACTGTAAGATGGCGAAGAACGTTTTTAATGAGATCGGAGCGACATATAAAGTTGTTGAGCTGGATGAGCACAATGATGGCAGTCGTCTACAGGAGACCTTAGCCCAAATGACAGGCGCCAGAACAGTGCCAAGAGTCTTTATTAACGGGCAGTGCATCGGAGGAGGCACGGATACCAAGCAGCTCCACCAGCAAGGGAAACTTCTTCCTCTTATTGAACAGTGTAGGCCGTGCTGTTCGAGTGCCTCCCCCGAGGCCTCCGGCGGCGCTCAGTATCAACATAATCAGTCATAATGCTCTGTGATATGTGTTTATACTCGTCGGCCACCCTTGAAGAGCCCAAACAGAGGTTAAGTAGATGTGTTTTAACATGCATGCTGCAGTCAGGGAAAATGTACTTTCCTGACTGATCGACATGGGTGCTGTTATTTTTGGGTTATTATGCACTGTATGTTttcttgtaaatatataatgccAAACGGTATCACGCCAAGCATTTTAGATTACTTTCTGACCTGAGTTACAAAACTTCAGCAGTCCtttatgtacataaatatttaaaataaagtattaagtCTTTTGCAAAA
>XM_043223504.1
GACCAGGACGGGCCGGTGGCGAACCATCGCGGCGACCCGCGGGGGGCGGGGCTTCCTCGCGTCACGCCGATGCGGTTCCGGGTAAGAGAATGGGGAACTACTCGTCGGCGTCGCCTGGGTCGTCGAGCTCGGCTTGCTCTCGGTTCGTCCAGGATGTTGTTTCCAGTAACTGCGTTGTAATATTCTCCAAAACCACGTGCCCATACTGTAAGATGGCGAAGAACGTTTTTAATGAGATCGGAGCGACATATAAAGTTGTTGAGCTGGATGAGCACAATGATGGCAGTCGTCTACAGGAGACCTTAGCCCAAATGACAGGCGCCAGAACAGTGCCAAGAGTCTTTATTAACGGGCAGTGCATCGGAGGAGGCACGGATACCAAGCAGCTCCACCAGCAAGGGAAACTTCTTCCTCTTATTGAACAGTGTAGGCCGTGCTGTTCGAGTGCCTCCCCCGAGGCCTCCGGCGGCGCTCAGTATCAACATAATCAGTCATAATGCTCTGTGATATGTGTTTATACTCGTCGGCCACCCTTGAAGAGCCCAAACAGAGGTTAAGTAGATGTGTTTTAACATGCATGCTGCAGTCAGGGAAAATGTACTTTCCTGACTGATCGACATGGGTGCTGTTATTTTTGGGTTATTATGCACTGTATGTTttcttgtaaatatataatgccAAACGGTATCACGCCAAGCATTTTAGATTACTTTCTGACCTGAGTTACAAAACTTCAGCAGTCCtttatgtacataaatatttaaaataaagtattaagtCTTTTGCAAAA

Function

symbol description
glrx2 Enables 2 iron, 2 sulfur cluster binding activity and glutathione disulfide oxidoreductase activity. Acts upstream of or within central nervous system development; circulatory system development; and protein deglutathionylation. Located in cytosol. Is expressed in neurons. Orthologous to human GLRX2 (glutaredoxin 2).

NR:

description
glutaredoxin 2 isoform X3

GO:

id name namespace
GO:0045454 cell redox homeostasis biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0007417 central nervous system development biological_process
GO:0005829 cytosol cellular_component
GO:0009055 electron transfer activity molecular_function
GO:0015035 protein disulfide oxidoreductase activity molecular_function

KEGG:

id description
K03676 grxC, GLRX, GLRX2; glutaredoxin 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223500.1 True 1298 mRNA 0.44 3 12019356 12021636
XM_043223501.1 False 800 mRNA 0.49 4 12019242 12021636
XM_043223502.1 False 869 mRNA 0.44 4 12019355 12021636
XM_043223503.1 False 1198 mRNA 0.43 4 12019354 12021636
XM_043223504.1 False 790 mRNA 0.49 4 12019259 12021636

Neighbor

gene id symbol gene type direction distance location
b3galt2 b3galt2,LOC107741544,LOC107715722,LOC107564918,LOC107664691,LOC107560698,LOC107655413 coding upstream 15386 11997220 ~ 12003856 (+)
LOC122328196 mrpl14,LOC107676385 coding upstream 226077 11792550 ~ 11793165 (+)
LOC122327862 NA coding upstream 226784 11787586 ~ 11792458 (+)
LOC122327737 LOC107717980,LOC107676979,LOC107719556,LOC107699417,LOC107586407 coding upstream 483501 11522004 ~ 11535741 (+)
LOC122327738 LOC107717981,LOC107676948,LOC107593360,LOC107699418,LOC107586443,LOC107719634 coding upstream 506307 11507461 ~ 11512935 (+)
uchl5 uchl5,LOC107664699,LOC107655412 coding downstream 481 12022117 ~ 12026752 (+)
ccdc50a ccdc50,si:ch73-6k16.1,LOC107560694 coding downstream 35184 12056820 ~ 12077871 (+)
LOC122327174 LOC107741537,LOC107564920,LOC107655355,LOC107715710 coding downstream 60785 12082421 ~ 12084561 (+)
p3h2 p3h2,LOC107664742,LOC107564922,LOC107715694 coding downstream 65529 12087165 ~ 12122997 (+)
LOC122327103 NA coding downstream 103857 12125493 ~ 12130315 (+)
G151976 NA non-coding upstream 12660 12006268 ~ 12006582 (+)
G151972 NA non-coding upstream 26442 11992590 ~ 11992800 (+)
G151936 NA non-coding upstream 151701 11867082 ~ 11867541 (+)
LOC122327899 NA non-coding upstream 232531 11777483 ~ 11786711 (+)
G151906 NA non-coding upstream 466931 11551893 ~ 11552311 (+)
G151999 NA non-coding downstream 24216 12045852 ~ 12048265 (+)
G152015 LOC107570371,LOC107664873 non-coding downstream 194811 12216447 ~ 12216846 (+)
G152016 LOC107733205,LOC107563524,LOC107655402,LOC107715731 non-coding downstream 217472 12239108 ~ 12239444 (+)
G151983 NA non-coding downstream 231205 12252841 ~ 12253286 (+)
G152028 NA non-coding downstream 284918 12306554 ~ 12331845 (+)
LOC122327134 senp7,si:dkey-100n23.3,LOC107748206,LOC107600307,LOC107655520,LOC107571594,LOC107717676,LOC107704544,LOC107566043,LOC107704674 other upstream 184108 11826565 ~ 11835134 (+)
LOC122327289 capn8,LOC107565180,LOC107755343,LOC107722658,LOC107655376,LOC107655329,LOC107566058,LOC107571859 other upstream 194035 11822934 ~ 11825207 (+)
mier2 LOC107729715,LOC107593358,LOC107676949,LOC107699399,LOC107719562,LOC107586401 other upstream 691012 11318107 ~ 11328230 (+)
peak3 LOC107676959,LOC107729697,LOC107593354,LOC107655164,LOC107586433,LOC107719638,LOC107593339 other upstream 1024298 10935035 ~ 10994944 (+)
si:dkey-172o19.2 LOC107729689,LOC107676945,LOC107596881,LOC107719578 other upstream 1097211 10918089 ~ 10922031 (+)
LOC122327107 LOC107563522,LOC107715696,LOC108430069,LOC108271041,LOC105898241 other downstream 154051 12175687 ~ 12189006 (+)
G152032 NA other downstream 271764 12293400 ~ 12294717 (+)
G152043 LOC107741571 other downstream 323570 12345206 ~ 12345750 (+)
G152065 LOC107716432,LOC107655331,LOC107575070,LOC107715704,LOC107570368,LOC107755334,LOC107659303 other downstream 387670 12409306 ~ 12423922 (+)
LOC122327156 NA other downstream 1045778 13067414 ~ 13098756 (+)

Expression


Co-expression Network