si:ch211-103a14.5 (si:ch211-103a14.5,LOC107710811,LOC107667641,LOC107750697,LOC107698289,LOC107570676,LOC107574826)


Basic Information

Item Value
gene id si:ch211-103a14.5
gene name si:ch211-103a14.5,LOC107710811,LOC107667641,LOC107750697,LOC107698289,LOC107570676,LOC107574826
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 1030351 ~ 1036117 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223723.1
TTTCATGATTTCGGGGTTTAGCTGCAACTGACAGTGAGCTCGAGCCCGTCACTGATTCAGAGGAACACCGAGCAGAAGAAAATGGCCCCGCACCTGAAGCTCCTGTAACCCCGCCCACTCACAGAGACAGAGCGGAAAAGAACAGCAGGGAGTGACGTCAGCAGTAATTGGCCGGGACACCCTCCTCCTCTTCTGTGCTGAGAGCCGATCTGAGCCGTGTCAGTGTGAGCAGAGAGGGCCAGCGCTCACAGATCGGCATCATGGGAAACTCCTCCAGCATGTCAGTGAAGGAGCTGAGCGCCTGTCACTCCCATCAGTGGTACCGCAAGTTCATGACCGAGTGTCCGTCCGGCCAGCTCACCTTCTACGAGTTCAAGAAGTTCTTCGGCCTGAAGAATCTGTCAGAAACGTCAAACGAGTACGTCAAGACCATGTTCAAGACCTTCGACATCAACGACGACGGCTGTATTGACTTCATGGAGTACGTGGCAGCTCTGAGTTTGGTTCTGAAGGGTGGTGTTCAGCAGAAGCTGCGCTGGTACTTCAAGCTCTTCGACGTGGACGGCAGCGGCTGCATCGACCGCGAGGAGCTGCTGCTCATCTTCAAGGCCATTCAAGCCATTAATGGAGTGGAGCAGGAGCTTTCTGCTGAGGAAATGACTGACATGGTGTTTAACAAGATTGACATTAACGGAGACGgcgaGCTGTCTCTGGACGAGTTCATCGAGGGCATCCAGGCGGACGAGGTTCTCTCCGTGATGTTGACTCAGAGTCTGGATCTGACTCATATCGTCAGTAATATCTACACAGACATCGGCTCTGAGCAGCAGCTCAACTGACCCCAGACCAGCTGGAGATCAGGTGCCAAACGAGAGGAAGACGAGGAGCGTTTCTCAACTCTACAGCTGCTGAAGAGCTTTAAACCCTCATCTCAGCAGCCTGATTATTCCCCGTAACCACACACCATAACTGAGACTAGAGCAAGCGCTTTGTTTAAGTGCACTTATGCAGGTAACACCTAGGGAACAAATCTCTAAAATGTGCAATGTTTCTTCAGCCCTGTGATGTACAGCAGGTAGATGATCTGTCCTGCAAGAACTCCATCTTAATGTTACATGGTATTGTCATatgtattatagtattatagtgTACATACGTATAGTGTGCGTTTGTAatgttactgtaattttacaccTCCCcatttcaaagtaaaatatgaaatgtgttatttgtaTACAGAATAATGGCTATAATGGACCTCCCTGTATATTTCGACTCGATCTATTTAAGGGTTAATCATTAACCTGTCCACATATAAATACTGTTGCAGTGCAAACGTTTTTCCGGAAGCATTTAATCATCTTATACATCTAACAAATGTAACATAAATCAGTTTCccaaagatatattttaatatttacgtGAAGTGCGAAAACAAAACGGCTTACGTCACACGCGTGACTAAATCTGATTGGTTCTTGGGTATCAAGCGCGCCAAAAGTGGTTTAATGAATGTGAATAGAAATCCAAAAGAAAGTCTCTTAAATAACACGGACCGACCATTTCTGTTTGGTTTGACAGTGTTTGGAACGACgagctaattaaaatatattttgtacaatctattaaatgaaataataataataaaaa

Function

symbol description
si:ch211-103a14.5 Predicted to enable calcium ion binding activity and calcium sensitive guanylate cyclase activator activity. Predicted to act upstream of or within visual perception. Predicted to be located in photoreceptor outer segment.

NR:

description
PREDICTED: guanylyl cyclase-activating protein 1-like

GO:

id name namespace
GO:0031284 positive regulation of guanylate cyclase activity biological_process
GO:0005509 calcium ion binding molecular_function
GO:0008048 calcium sensitive guanylate cyclase activator activity molecular_function

KEGG:

id description
K08328 GUCA1; guanylate cyclase activator 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223723.1 True 1650 mRNA 0.45 5 1030351 1036117

Neighbor

gene id symbol gene type direction distance location
wdr77 wdr77 coding upstream 7490 1017009 ~ 1022861 (+)
camk1ga camk1ga,LOC107750693,LOC107667631,LOC107698298,LOC107570679 coding upstream 29964 989338 ~ 1000387 (+)
si:ch73-352p18.4 LOC107667632,LOC107750694,LOC107570681,LOC107710805 coding upstream 41144 984839 ~ 989207 (+)
pparda ppard,pparda,LOC107667629,LOC107710804,LOC107698299,LOC107570682 coding upstream 47349 973340 ~ 983002 (+)
def6b def6b,LOC107667628,LOC107750690,LOC107570683,LOC107698284 coding upstream 57641 965249 ~ 972710 (+)
LOC122328115 NA coding downstream 77047 1113164 ~ 1121666 (+)
LOC122327961 LOC107711386,LOC107579500,LOC107662827 coding downstream 86733 1122850 ~ 1124930 (+)
LOC122328116 NA coding downstream 98354 1134471 ~ 1136105 (+)
LOC122327901 LOC107745441 coding downstream 125226 1161343 ~ 1521207 (+)
LOC122328021 LOC568664 coding downstream 186579 1222696 ~ 1228583 (+)
G148033 NA non-coding upstream 18715 1009390 ~ 1011636 (+)
G148002 NA non-coding upstream 137128 892589 ~ 893223 (+)
LOC122328050 NA non-coding upstream 201236 825151 ~ 829115 (+)
G147984 NA non-coding upstream 280704 749048 ~ 749647 (+)
G147898 NA non-coding upstream 304105 724669 ~ 726246 (+)
G148219 NA non-coding downstream 14568 1050685 ~ 1050910 (+)
G148226 NA non-coding downstream 147403 1183520 ~ 1190524 (+)
LOC122328044 NA non-coding downstream 300001 1336118 ~ 1338916 (+)
G148251 NA non-coding downstream 304120 1340237 ~ 1359295 (+)
G148255 NA non-coding downstream 342782 1378899 ~ 1428291 (+)
G148214 wdr77 other upstream 13684 1015779 ~ 1016667 (+)
G147888 LOC107732183,LOC107723096,LOC107572363,LOC107698292,LOC107750676,LOC107656899 other upstream 236345 791234 ~ 794006 (+)
G147985 LOC107723118,LOC107656907,LOC107572366 other upstream 278842 750279 ~ 751509 (+)
G147896 NA other upstream 303584 726400 ~ 726767 (+)
G147937 NA other upstream 370737 653880 ~ 659614 (+)
G148233 LOC107571167,LOC107662825,LOC107663547 other downstream 89369 1125486 ~ 1127230 (+)
LOC122327965 NA other downstream 101600 1137717 ~ 1148802 (+)
G148222 NA other downstream 343174 1379291 ~ 1384847 (+)
LOC122328040 NA other downstream 585875 1621992 ~ 1880883 (+)
G148295 NA other downstream 588355 1624472 ~ 1625190 (+)

Expression


Co-expression Network