LOC122327965


Basic Information

Item Value
gene id LOC122327965
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 1137717 ~ 1148802 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223685.1
ggagaagatgTCAGTAGTTTCCATCCTCGGTCGGTCAGCGCTCGTTTGTTGGGAGATTTGAGCCTGTCACTGTAAGACAATCACAATCACACCttcagtgaagctcctcccacaacaaacacaccttcaatgaagctcctcccacaacaATCACACGTTCAGTAAAGCTCCTCCCACAAAAAATATCACATCttcagtgaagctcctcccacaacaaacacaccttcaatgaagctcctcccacaacaATCACACGTTCAGTAAAGCTCCTCCCACAACAAAATCACATCttcagtgaagctcctcccacaacaATCTCGCCttcagtgaagctcctcccacaacaATCTCACCttcagtgaagctcctcccactGCGGTTCAGTAATAAATGCTGGAATATTCCCATCAGTCTACAAGTCAAGACGAGGATCAGAGAATCAGGAAGAAGAGAAATctgcagaaacagagagaacatGAGAGATCCAGAACCCTGCAGAATGAAACACACTGAAGAACAAACagAACCGATTAAACAAAACGAGAACAACGAAATTaatgaagaggaggagaaacaTCACGTCGAAAAAGCTTTGAGTCGCTCTCAAACCAAACAGAATTGTTTAAAGAAAAGGAGAGATGGTAAATCTTTCACCTGcactcagtgtggaaagagtttgaAACGTGAACAGAATCTCAAGATTCACATGAGGagccacactggagagaaaccataCAAGTGCTCACACTGCGACATGAGATTCAGTCAGTCAGACACCCTGAAAACacacgagaggatccacaccggagagaaaccatacacatgtgatcagtgcgggaagagtttcagaCAAAAACCTCATTTTATGGCacacatgagagttcacacgGGAGAGAAACCGTTCACTTGTGATCTGTGCGGGAAGAGTTTTACGCAATCAACAACCCTTAAGAAACACATGAACATCCACTCTGGAGAGAAACCGTTCAcgtgtgatcagtgcgggaagagttttaTACAGTCAGCAACCCTTAAGGATCACATGAtcatccacaccggagagaaagtGCATGAATGTGACGAGTGCCGCAAAACATTTCTGAGGGCTTCAAACCTGAAGAGTCACCTGAAAGTTCATTTAAAGGAGAAACCACATTCGTGTTCTTTGTGCGGACGGACTTTTTCACACcagcaaaatttaaaaatacatcagaAGAGACATAGCGGTGTGAGAGATTTCGTGTGCTTCGAGTGTGGGAAGACTTTCATTACGGCAGAAGAACTGAAACTGCACCAGAagatccacactggagagaaaccttacaagtgttcacactgcGACAAGAGATTCATTCGGCCGGCACAACTTAAATCACATGAGAggattcacactggagagagacCATATCACTGCACCGCATGCGGGAAGAGTTACACTCATTCATCCTCTCTTTGCACACATACGAAAAACAATCACAGTCAGTAGATCATCTtcatccaattttttttaatggaatagtAAGTTTCCTTGCAGCTTCCTCTATGTTGACAGTGAACAGACTATAAAGTGAATGAATCTAACTCTACAAGAACAGTCTGGctcttctgactcacaacctttaagtaagttacattttcattttaaaagaacctgatacttactattcaaacgaGTAGAGtaatgcttgttgtttgtcatttctctGATCACGAATGCAGAAATAGGTTTGATGTAATGCAATGCCTAAAAAGACAGTATAAATCACGATAATCAGCAATTATATCCCCAGTGGATGCAACACACGTCtcatttataat
>XR_006247738.1
ggagaagatgTCAGTAGTTTCCATCCTCGGTCGGTCAGCGCTCGTTTGTTGGGAGATTTGAGCCTGTCACTGTAAGACAATCACAATCACACCttcagtgaagctcctcccacaacaaacacaccttcaatgaagctcctcccacaacaATCACACGTTCAGTAAAGCTCCTCCCACAAAAAATATCACATCttcagtgaagctcctcccacaacaaacacaccttcaatgaagctcctcccacaacaATCACACGTTCAGTAAAGCTCCTCCCACAACAAAATCACATCttcagtgaagctcctcccacaacaATCTCGCCttcagtgaagctcctcccacaacaATCTCACCttcagtgaagctcctcccactGCGGTTCAGTAATAAATGCTGGAATATTCCCATCAGTCTACAAGTCAAGACGAGGATCAGAGAATCAGGAAGAAGAGAAATctgcagaaacagagagaacatGAGAGATCCAGAACCCTGCAGAATGAAACACACTGAAGAACAAACagAACCGATTAAACAAAACGAGAACAACGAAATTaatgaagaggaggagaaacaTCACGTCGAAAAAGCTTTGAGTCGCTCTCAAACCAAACAGAATTGTTTAAAGAAAAGGAGAGATGGTAAATCTTTCACCTGcactcagtgtggaaagagtttgaAACGTGAACAGAATCTCAAGATTCACATGAGGagccacactggagagaaaccataCAAGTGCTCACACTGCGACATGAGATTCAGTCAGTCAGACACCCTGAAAACacacgagaggatccacaccggagagaaaccatacacatgtgatcagtgcgggaagagtttcagaCAAAAACCTCATTTTATGGCacacatgagagttcacacgGGAGAGAAACCGTTCACTTGTGATCTGTGCGGGAAGAGTTTTACGCAATCAACAACCCTTAAGAAACACATGAACATCCACTCTGGAGAGAAACCGTTCAcgtgtgatcagtgcgggaagagttttaTACAGTCAGCAACCCTTAAGGATCACATGAtcatccacaccggagagaaagtGCATGAATGTGACGAGTGCCGCAAAACATTTCTGAGGGCTTCAAACCTGAAGAGTCACCTGAAAGTTCATTTAAAGGAGAAACCACATTCGTGTTCTTTGTGCGGACGGACTTTTTCACACcagcaaaatttaaaaatacatcagaAGAGACATAGCGGTGTGAGAGATTTCGTGTGCTTCGAGTGTGGGAAGACTTTCATTACGGCAGAAGAACTGAAACTGCACCAGAagatccacactggagagaaaccttacaagtgttcacactgcGACAAGAGATTCATTCGGCCGGCACAACTTAAATCACATGAGAggattcacactggagagagacCATATCACTGCACCGCATGCGGGAAGAGTTACACTCATTCATCCTCTCTTTGCACACATACGAAAAACAATCACAGTCAGTAGATCATCTtcatccaattttttttaatggaatagtAAGTTTCCTTGCAGCTTCCTCTATGTTGACAGTGAACAGACTATAAAGTGAATGAATCTAACTCTACAAGAACAGTCTGGctcttctgactcacaacctttaaCACTAGGACGCGGCATCACGTTATGATCATACCATGCACCTGGAGAACATGGAGTTGATCGAGATTATAGCGCtctaaatacattaaaagttttaaaaacacaaactcaccGGCAAGACACCACAAGCAGAACAAAACTAATTGgagaaacattttctttgctGTTTCGCTGAAAACCCCACTCAAGACTGAAGTGTGATATTTATCTGCTTAAATCTGCTCTCGACAGGATTCTCACGTCTCAGTTTCCTTTGTCGGAGGAAGTCATCAAAATACTCAAGGTTTTGCTGATTCTCACTTTTTAAAGTGGATTTAGGCCCAGCACAGGGTTGGACTGTTTTTTCAGTGGGCCGATACACTTCTGGGTcagtacaattttttatttccaCCAAGGACCAGCCCATCATTCAGGGACAACGGCCCATCAGAAAGCACTATATAGACGGAGTGATAAGGGATCTTATGGACAGATCAAGGCGAAACCTTCTGAGAAGCTCAGAGATGCCGCGAAACGTGCCTCGTCTTCGTCAATTACGAAGTTTACACAACGTCTTATTATACTTTACTACTCCAATTTTATACTGTCCTGTGCTTTAACACAATATGTACTGGTGAAAGcggtatataaataaaggtgattgattgattgacatcaCCCCAGCTGTACAGTAGGGACACCTGCCTGTCCCAGGAAGAACATCATCTGTTCCTCAAAAGTTTTTGGGTCCTGCTGCAGATGAAGGCTGTCAGTATGTGACTGGAATCGTGGGTAAAAACCTGTTACTCCTGAGAGAACTGAATCTGAGTGAACATGAACTAGAAGACACACGAGTGAATCAGATCTCTGCTCTACTGCAGGATAAACACTGTCAGATCAACACACTGAAGTAATGTACTCGATTTCACAATGTCACACGCTGCTGAGAATAATTAAGCCAAGCATCTTCTCAATAGACATCAAGACATCGAGACATCAACGTGTCAAAAAGTGTGACGTTAACACAGCGTAGATTTTAAACATAGCAGACAAAAATCATGCGAGAAGGCTCAACATTTACCAGTTTCacttgcatttataattaacaGATGCTAGTATCGTCTTCTATCATGTAAAACtctaaaataaacactaaaagtcTGCAGTTTTATGGCACTTCAAAACTAATTTCCCCTTACTGTCACAGACtggtatatatttgtatatatttatatatttttgtatagttttcTGTACTGTATACTATTTTGTGTAAGGGTAAAGTAAGTTGTGATGTGGTCTAAGCATTTGAAAGTTGTAGAGTGTTTCTTGTTGCTGATAGAGCATATCAAAATAACATGTTTTCCAATAAGCCTGTATAGGTCATTTGGACAAATCCCTGAAATACGACCCATCATAGCATTGCGCCACCCCTACACTGTTTGGTACCATTTTATCTGCGTCGTAATTTGTGCCTTGTGTAGCTTAGTCTGTAAAGCATTGCGTTATACGATGAGACGTGATCCTGCAAGCATGGGTTCAAGCTCATGAAGcttaataaatagaattaagTGCGGTcattcacaaaatataattaaacaaaaaaggcGATATTACTTTCGAGTCAATGAGTTCGCCTATTAGTGGTATGAAAGGAGCACAGCTTTCACTCGCAGCCAAACTAACGCTACTAGCCAATCATTTTGCTCAAACACAAGACACGTATAGTAGGCTATATTTAAGAGCAGAGTCGCAAGAAAAACTATGTTTTATCTCCTCTGTGTATTAAACCTTTGCAAACACAGGAGTATACATCAGCCTATTTCTAATCTATTTAATATgccatttattgtattttatatttttgtacattgaTATAGTTTGCATATGGccatatattaaaatgacatgcatttaaacatttcatcatGGCAAAGCATGACAGCAAACTCTGCAGGCATTTgttataatacataatgtaattaagttttttgttttttgttcatatcATATATAGGTATTtcacattatgtattttaacagtgttgttcatttaaatgtaattacttggttttgatattttatgcGCCAATTATTACTACCTTATCATTAGTCATACTAAAGTTATTAAGTTAGGCCTCGTGTTActaaaaatctgtatatttgGTAGGTTACTTGATTACCAAAATAATCATAGTTACAGCCCTAGATTAgttaatatatttctgtcacGATTTCCGTGGTTTCGCGGGAGAGAAAAGGAGTGCTCGAGACTcgaaaatacaaaaacttaaacagatttaattcaaaACTGGTAAAAGtatatacaaaaggcaggtagaacaaaaaccacgaaaagGAGCTCGGGAAACAAAACAGAGTTACgttgaaacattgaaacatgGTAACGTTGATGATCCGACAACGTGCACACAAcacacagggcttaaatacaaagggaaattaactaaattaacgagacaaggctgaagacaattaaacaattaaacaccaaggggaaggca
>XR_006247739.1
ggagaagatgTCAGTAGTTTCCATCCTCGGTCGGTCAGCGCTCGTTTGTTGGGAGATTTGAGCCTGTCACTGTAAGACAATCACAATCACACCttcagtgaagctcctcccacaacaaacacaccttcaatgaagctcctcccacaacaATCACACGTTCAGTAAAGCTCCTCCCACAAAAAATATCACATCttcagtgaagctcctcccacaacaaacacaccttcaatgaagctcctcccacaacaATCACACGTTCAGTAAAGCTCCTCCCACAACAAAATCACATCttcagtgaagctcctcccacaacaATCTCGCCttcagtgaagctcctcccacaacaATCTCACCttcagtgaagctcctcccactGCGGTTCAGTAATAAATGCTGGAATATTCCCATCAGTCTACAAGTCAAGACGAGGATCAGAGAATCAGGAAGAAGAGAAATctgcagaaacagagagaacatGAGAGATCCAGAACCCTGCAGAATGAAACACACTGAAGAACAAACagAACCGATTAAACAAAACGAGAACAACGAAATTaatgaagaggaggagaaacaTCACGTCGAAAAAGCTTTGAGTCGCTCTCAAACCAAACAGAATTGTTTAAAGAAAAGGAGAGATGGTAAATCTTTCACCTGcactcagtgtggaaagagtttgaAACGTGAACAGAATCTCAAGATTCACATGAGGagccacactggagagaaaccataCAAGTGCTCACACTGCGACATGAGATTCAGTCAGTCAGACACCCTGAAAACacacgagaggatccacaccggagagaaaccatacacatgtgatcagtgcgggaagagtttcagaCAAAAACCTCATTTTATGGCacacatgagagttcacacgGGAGAGAAACCGTTCACTTGTGATCTGTGCGGGAAGAGTTTTACGCAATCAACAACCCTTAAGAAACACATGAACATCCACTCTGGAGAGAAACCGTTCAcgtgtgatcagtgcgggaagagttttaTACAGTCAGCAACCCTTAAGGATCACATGAtcatccacaccggagagaaagtGCATGAATGTGACGAGTGCCGCAAAACATTTCTGAGGGCTTCAAACCTGAAGAGTCACCTGAAAGTTCATTTAAAGGAGAAACCACATTCGTGTTCTTTGTGCGGACGGACTTTTTCACACcagcaaaatttaaaaatacatcagaAGAGACATAGCGGTGTGAGAGATTTCGTGTGCTTCGAGTGTGGGAAGACTTTCATTACGGCAGAAGAACTGAAACTGCACCAGAagatccacactggagagaaaccttacaagtgttcacactgcGACAAGAGATTCATTCGGCCGGCACAACTTAAATCACATGAGAggattcacactggagagagacCATATCACTGCACCGCATGCGGGAAGAGTTACACTCATTCATCCTCTCTTTGCACACATACGAAAAACAATCACAGTCAGTAGATCATCTtcatccaattttttttaatggaatagtAAGTTTCCTTGCAGCTTCCTCTATGTTGACAGTGAACAGACTATAAAGTGAATGAATCTAACTCTACAAGAACAGTCTGGctcttctgactcacaacctttaaCACTAGGACGCGGCATCACGTTATGCTCTTCTGCATCTGATGTGATACACAAGAATAAGGACAGTAGCCACGCCCACCAGAGCGGAGAGGACCAATCGGATCACAGCTTCAGTAAAACCACAACAGTGTTGAGAGTCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223685.1 False 1818 mRNA 0.43 3 1137717 1141142
XR_006247738.1 True 4125 transcript 0.40 7 1137717 1148802
XR_006247739.1 False 1763 transcript 0.44 5 1137717 1141809

Neighbor

gene id symbol gene type direction distance location
LOC122328116 NA coding upstream 1612 1134471 ~ 1136105 (+)
LOC122327961 LOC107711386,LOC107579500,LOC107662827 coding upstream 12787 1122850 ~ 1124930 (+)
LOC122328115 NA coding upstream 16051 1113164 ~ 1121666 (+)
si:ch211-103a14.5 si:ch211-103a14.5,LOC107710811,LOC107667641,LOC107750697,LOC107698289,LOC107570676,LOC107574826 coding upstream 101600 1030351 ~ 1036117 (+)
wdr77 wdr77 coding upstream 114856 1017009 ~ 1022861 (+)
LOC122327901 LOC107745441 coding downstream 12541 1161343 ~ 1521207 (+)
LOC122328021 LOC568664 coding downstream 73894 1222696 ~ 1228583 (+)
LOC122328020 LOC568664 coding downstream 125632 1274434 ~ 1285114 (+)
LOC122327924 LOC107566706 coding downstream 163211 1312013 ~ 1346551 (+)
LOC122327991 NA coding downstream 273557 1422359 ~ 1423773 (+)
G148219 NA non-coding upstream 86807 1050685 ~ 1050910 (+)
G148033 NA non-coding upstream 126081 1009390 ~ 1011636 (+)
G148002 NA non-coding upstream 244494 892589 ~ 893223 (+)
LOC122328050 NA non-coding upstream 308602 825151 ~ 829115 (+)
G147984 NA non-coding upstream 388070 749048 ~ 749647 (+)
G148226 NA non-coding downstream 34718 1183520 ~ 1190524 (+)
LOC122328044 NA non-coding downstream 187316 1336118 ~ 1338916 (+)
G148251 NA non-coding downstream 191435 1340237 ~ 1359295 (+)
G148255 NA non-coding downstream 230097 1378899 ~ 1428291 (+)
LOC122328038 NA non-coding downstream 253043 1401845 ~ 1406107 (+)
G148233 LOC107571167,LOC107662825,LOC107663547 other upstream 10487 1125486 ~ 1127230 (+)
G148214 wdr77 other upstream 121050 1015779 ~ 1016667 (+)
G147888 LOC107732183,LOC107723096,LOC107572363,LOC107698292,LOC107750676,LOC107656899 other upstream 343711 791234 ~ 794006 (+)
G147985 LOC107723118,LOC107656907,LOC107572366 other upstream 386208 750279 ~ 751509 (+)
G147896 NA other upstream 410950 726400 ~ 726767 (+)
G148222 NA other downstream 230489 1379291 ~ 1384847 (+)
LOC122328040 NA other downstream 473190 1621992 ~ 1880883 (+)
G148295 NA other downstream 475670 1624472 ~ 1625190 (+)
LOC122327950 NA other downstream 477760 1626562 ~ 1639006 (+)
LOC122327951 NA other downstream 706065 1854867 ~ 1857142 (+)

Expression


Co-expression Network