LOC122327924 (LOC107566706)


Basic Information

Item Value
gene id LOC122327924
gene name LOC107566706
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 1312013 ~ 1346551 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223610.1
TTGAGATGCATCACAAGAATTACCTGAAGGAGTTCAgtcactgaaaaaataataaatgctgtatattaTAGTTTGAGATCATCTTGAGAGGAGCAGTAAACATCAGATGAAGATCCACAGAAGAGCTTCACTATGTCACGTTTTCCGTGGTTTTCTCGGGAGAAAGAGCGCTCGAGACTCGAAAATAAACGGACAGACTTGGACACatagaccagtgaggagcccaAGGAAGAACCGAACCCAACAGGCCTCGGGGGCCAACCCCTACGGTGAAGATTTTCCTTATAGGTTTTTCACCATCCACTAGTCCATCCTTACCTTACTGGTCCATAGGTGTCAAATGACTTAATActaggtcaacaaaaccactatacgatcaccaaAATTTAAACCACTATATGATCACCAAGATATAAcccactatacgatcaccagTCTAAAAATATCTATGCATGaatactgctggtctgctgtttctttgttttcttgtgtttcaggtccGTGTATATACATGTCATCTCATATGCAGCTGCTGACGGGAAGGAGGCAGGTGAACAACTTCTCGCCCTCCGGCAAGGTTAAGAGGCTGTGAAATGACAGATGAATGAAcccatcacacctgagagaactcaACCTGAATGAGAACCAAATAGAAAACTCAGGAGTGAATCACTTATGTGACGTACTGAAGGATTCACACTGTAAACTTGAGAGATTGAGGTTAAGCAGCAGTGGTTTGACAGATGAAGGTTTTTCTGCTGTGACAGGTCTGAAATCAAACTCATTACACCTGAGATAACTGAACCTGAGCGGAAATGAACTCAGAGACTCTGAAGTAAAACATCTCAGTGatctactgatgaacacacaattcAAGCTGGAGAAACTAAATGTAAGATCAAGCTCTCATGTGTCCAGCTCTGTGTCTGTGAAGAGCGACCGGTCAAAAGATAATCCACCAGAATTCAGTGAGGAGACACCACCAGCTACTGAAAGTGTAAAGTCATATTCTCATGTGTCCAGCTGTGCATCTGTGAAAAGTGACCGGTCAAAAGATGATCCACCGCAATTGAGTAAAGAAAGTGCATCAAATACTCAAAGTCTTCGATATGAAACATTAACTTCAGACATCCAGATTAACAGGaatcacaaaaaaatcacagacaACCTCCTAGGAATCTTTcagAATCTTGAGaagaaaataatcacatttctaaaaaatgaGCTGGAAATGTTcaagaaaatattacagaaagaGAACAAGCAACAATTTGTGGAGGATTTTAATGAGAACAGATGCAGTAACAGAGAAGCAGCTCTTGATCTCACGCTCTACTTCTTAAGAGAGATGAAACAAGATAGAGCTGCTGATACTCTAGAAGATGAGCTGATCTTCATTCATCAGCTAAAGTGTAGCCTAAAGAAGAAGTATCAATGCGTGTTTGAAGGAATCACAAAGCAAGGAGACTCTACACTTCTGAAGAACATCTACACAGATCTCTATATCACTCAGGGTTGTAGTGAACCGGTCAATACTGAACATGAGGTCAGACAGATTGAAATTGCTTCCAGACATCATGAATCACAAGACATACAGGTTGAGTGCAAAAATTTGTTTGAAGCATCTGAACAAGACGAGCAGATCAGAACTGTACTGACAAAAGGAGTCGCTGGCATCGGAAAAtcagtctctgtgcagaagtttgTTCTGGATTGGgctgaaggaaaagaaaatcaagACATCAGCTTCTTATTTCCTcttccattcagagagatgaacttaaaggagaaagaaaaactaagTTTAATGGACCTTATTTCTCAGTTTTTCCCAGAGACGAAAGGACTGAAACTTATAAGAAGAAATCAATTCAAGGTCCTGTTTATTCTTGATGGATTGGATGAATGTCGACTTCCTCTAAACTTTAAGGATAATGAGATATTGTGTGATGTTTCATCAGCAGCCTCTCTGGATGTTCTCCTAACAAACCTCATCAAGGGAAATCTGCTTccttctgctctcatctggatcaccacCAGACCAGCAGCTGCCAGTAAGATTCCTCCTGAATGTATCGAGCTGCTGACAGAGATACGAGGATTCAATGATGCACAAAAGGAGGAGTACTTCAGAAAAAGATTCACAGATCAAAATCAGGCCAAAGAAATCATTGATCATGTGAAACAATCAAAGAGTCTCTTtatcatgtgccacatcccagtcttctgctggatttCAGCCACAGTTctccagaacattttagaagagaaaagaaaaaatgtgttgaaaaaTAATGAGTCTGAAGATGCCTCCAAAACACTACAGGAGTCAAATACTGAAGACACTCCTAAGACTCTGacacaaatgtacacacactttcTTAGATTTCAGATCCAGCAGAGCAGAAGAAAGTATGATGGAGAACACACACCAGATGTTTCCTGGGATAAAGACGCCATTTTTTCACTGGGGAAACTGGCATTTGATCAGCTGGAAAGAAACAATGTGGTCTTCTATGACACAGATCTGGAAGCCTGTGGTATTGACGTCTATAAGGCATCAGTGTACTCAGGCATGTGTACCCAGATCTTTAAGGAGGAAACAGGGATCGTTTTCGGTACCATGTACTGCTTCGTTCACTTGAGCATTCAAGAGTTTATTGCAGCTCTTTATGCTCATCTGTTTCTGGAcctcaacaaaaaaagtgtgtttgatcAAGACTCTACACAAGAAAACACAAGTGAAATTGATTTCCTCAAGACTGCAGTGGACAAGGCTCTAGAGAGTGATAATGGACACCGAGATCTTTTTCTTCGATTCCTCCTTGGTTTGTCACTCCAGTCCAATCACAGACTCTTACAGGGTCTGTtgacacagaaaaataaaaatgacccgAGCAAAAAAGAAATAGTTGAGTACATCAAGCAGAAATTTGAAGCTAATCTGTCTCCAGAGAGATCCATCAATCTGTTCtactgtctgaatgaactgaaCGACCAAACTCTGGTGAAAGAGATTCAGACCCACCTTAACAAAGGGAGACTCTCATCTGCTGACCTTTCACCTGCCCAGTGGTCTGCTTTGGTCTTTGTGTTGTTGACATcagaggaggagctggaggagtttGAGCTTCAGAAATTCAAGAAATCAGACGAGTGTCTCATTAGATTATCAGCAGTTATCAAAACCTCCAAAAGAGCCCTGTAA

Function

NR:

description
PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC107566706

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223610.1 True 3208 mRNA 0.41 9 1312013 1346551

Neighbor

gene id symbol gene type direction distance location
LOC122328020 LOC568664 coding upstream 26899 1274434 ~ 1285114 (+)
LOC122328021 LOC568664 coding upstream 83430 1222696 ~ 1228583 (+)
LOC122328116 NA coding upstream 175908 1134471 ~ 1136105 (+)
LOC122327961 LOC107711386,LOC107579500,LOC107662827 coding upstream 187083 1122850 ~ 1124930 (+)
LOC122328115 NA coding upstream 190347 1113164 ~ 1121666 (+)
LOC122327991 NA coding downstream 75808 1422359 ~ 1423773 (+)
trnam-cau_116 NA coding downstream 85754 1432305 ~ 1432377 (+)
LOC122327918 LOC107710809,LOC107574827,LOC107667624,LOC107698297,LOC107575765,LOC107570670 coding downstream 91240 1437791 ~ 1445372 (+)
LOC122327926 LOC568664 coding downstream 155962 1502513 ~ 1508321 (+)
LOC122327993 NA coding downstream 245609 1592160 ~ 1596619 (+)
G148226 NA non-coding upstream 121489 1183520 ~ 1190524 (+)
G148219 NA non-coding upstream 261103 1050685 ~ 1050910 (+)
G148033 NA non-coding upstream 300377 1009390 ~ 1011636 (+)
G148002 NA non-coding upstream 418790 892589 ~ 893223 (+)
LOC122328050 NA non-coding upstream 482898 825151 ~ 829115 (+)
G148255 NA non-coding downstream 32348 1378899 ~ 1428291 (+)
LOC122328038 NA non-coding downstream 55294 1401845 ~ 1406107 (+)
G148260 NA non-coding downstream 63366 1409917 ~ 1417452 (+)
G148224 NA non-coding downstream 142848 1489399 ~ 1546893 (+)
LOC122328048 NA non-coding downstream 144893 1491444 ~ 1492481 (+)
LOC122327965 NA other upstream 163211 1137717 ~ 1148802 (+)
G148233 LOC107571167,LOC107662825,LOC107663547 other upstream 184783 1125486 ~ 1127230 (+)
G148214 wdr77 other upstream 295346 1015779 ~ 1016667 (+)
G147888 LOC107732183,LOC107723096,LOC107572363,LOC107698292,LOC107750676,LOC107656899 other upstream 518007 791234 ~ 794006 (+)
G147985 LOC107723118,LOC107656907,LOC107572366 other upstream 560504 750279 ~ 751509 (+)
G148222 NA other downstream 32740 1379291 ~ 1384847 (+)
LOC122328040 NA other downstream 275441 1621992 ~ 1880883 (+)
G148295 NA other downstream 277921 1624472 ~ 1625190 (+)
LOC122327950 NA other downstream 280011 1626562 ~ 1639006 (+)
LOC122327951 NA other downstream 508316 1854867 ~ 1857142 (+)

Expression


Co-expression Network