LOC122327926 (LOC568664)


Basic Information

Item Value
gene id LOC122327926
gene name LOC568664
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 1502513 ~ 1508321 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223613.1
TCACGGGATCTGTTGTAAACAGGACTTCATTCTTCTCTCTTATCAGGAGACACGCAGCTCTGGAGAAGATCACGCAGATGTGTGTTTAACAGCGATCACAAGCCGAAAGTGCTTTAAAGACTTCTTCATCTGTTTCTACAGAACAACATTTACACAACGACTTCAAACAGAGACACAGGGTCTTGTTCAGGACATGAGGAACATCTGATGATCTTCAGAGACACAAAGATctcagagaagagaagaaaaagatgaGTCTCTCAAAGAAACAGAGTGAAAGATCAGACTCATGTGTGTCCAGCTCTGTGTCTGTGAAGAGTGACTGGTCACATGGTTTGCCACCGGACTtaagtgaggaaaaaaaatcatctacCAAAAGTGTAAGATCAGACTCACATGTGTCTGTGAAGAGTGACCGGTCAAAGGGTGACGTGCCGAACTTCAGTGAAGAACCATCACAAACCAAACAgcTTCAGTATGAAACATTAGATGCAGATTTACAAACTAAcaggaaacacaaaaatattacagacaATCTCCTGCAGATCTTCCAggATCTTGAaagcaaaataatcaaatttttaaagaaagaactgaaaacttttaaaaaaatactacaaaaagaGGACATGCAAAACTTTGTGAAGGATTTTAATGAGAACAGAAGCAGTAACAGAGAAGCAGCTCTTGATCTCACGCTTTACTTCCTGAGAGAGATGAAGCAAGATGAAGCTGCTGATACTCTAGAAGaTGAGCTGTTCTTCATTCATCAGCTAAAGCGTAGCCTAAAGAAGAagtataagtgtgtgtttgaaggaATCACAAAGCAAGGAGACTCTACACTTCTGAAGAACATCTACACAGATCTCTATATCACTCAGGGTTGTAGTGAACAGGTCAATACTGAACATGAGGTCAGACAGATTGAAGTTGCTTCCAGACGTCACGaaacacaagagaaacaggttgAGTGCAAAAATTTGTTTGAAGCATCTGAACAAGACGAGCAGATCAGAACTGTACTGACAAAAGGAGTCGCTGGCATCGGAAAAtcagtctctgtgcagaagtttgTTCTGGATTGGGCcgaaggaaaagaaaatcaagACATCAGCTTCATATTTCCTcttccattcagagagatgAACTTAAAGGATAAAGAAAAGCTAAGTTTGATGGCCCTTTTATCTCAGTTTTTTCCAGAGACGAAAGGACTGAATCTTACGAGAAGAAATCGGTTCAAAGTCCTGTTCATTCTTGATGGATTGGATGAATGTCGACTTCCTCTAAACTTTAAGGATAATGAGATATTGTGTGATGTTTCATCAGCAGCCTCTCTGGATGTTCTCCTAACAAACCTCATCAAGGGAAATCTGCTTccttctgctctcatctggatcaccacCAGACCAGCAGCTGCCAGTAAGATTCCTCCTGAATGTATTGAGCTGCTGACAGAGATACGGGGATTCAATGATGCACAAAAGGAGGAGTACTTCAGAAAAAGATTCACGGATCAGAATCTGGCCAACGAAATCATCGATCATGTTAAACAATCAAAGAGTCTCTTtatcatgtgccacatcccagtcttctgctggatttCAGCTACAGTTctccagaacattttagaagagaaaagaaaaaatgtcatgAAAAATAATGAGTCTGAAGATGCCTCCAAAACACTACAGGAGTCAAATACTGAAGACACTCCTAAGACTCTGacacaaatgtacacacactttcTCAGATTTCAGATCCAGCAGAGCAGAAGAAAGTATGATGGAGAACACACACCAGATGTTTCCTGGGATAAAGATGCTATCTTTTCACTGGGGAAACTGGCATTTGATCAGCTGGAAAGAAACAACGTGGTCTTCTATGACACAGATCTGAAAGCATGTGGTATTGACGTCTATAAGGCATCAGTGTACTCAGGCATGTGTACCCAGATCTTTAAGGAGGAAACAGGGATCGTTCTTGGTACCATGTACTGCTTCGTTCACTTGAGCATTCAAGAGTTTATTGCAGCTCTTTATGCTCATCTGTTTCTAGAAATCAACAAGAAAAGTGTGTTTGATCAAGActcagaacagaaaaacaaaagtgaaattgATTTCCTCAAGACTGCGGTGGACAAGGCTCTAGAGAGTGATAATGGACACCTGGATCTTTTTCTTCGATTCCTCCTTGGTTTGTCACTTCagtccaatcagagactcttacagGGTCTGTTGACACAGCAGAATAGAAATGACCAGATCAAAAAGGAAATAGTTGAGTACATCAAGCAGAAATTTGAAGCTAATCTGTCTCCAGAGAGATCCATCAATCTGTTCtactgtctgaatgaactgaaCGACCAAACTCTGGTGAAAGAGATTCAGAACCACCTTAACAAAGGAAGTCTCTCATCTGCTGACCTTTCACCTGCCCAGTGGTCTGCTTTGGTCTTTGTGTTGTTGACATcagaggaggagctggaggagtttGATCTTCAGAAATTCAAGAAATCAGACGAGTGTCTCATTAGATTATCAGCAGTCATCAAAACCTCCAAAAGAGCTCTGtaa

Function

NR:

description
uncharacterized protein LOC568664 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223613.1 True 2576 mRNA 0.41 7 1502513 1508321

Neighbor

gene id symbol gene type direction distance location
LOC122327918 LOC107710809,LOC107574827,LOC107667624,LOC107698297,LOC107575765,LOC107570670 coding upstream 57141 1437791 ~ 1445372 (+)
trnam-cau_116 NA coding upstream 70136 1432305 ~ 1432377 (+)
LOC122327991 NA coding upstream 78740 1422359 ~ 1423773 (+)
LOC122327924 LOC107566706 coding upstream 155962 1312013 ~ 1346551 (+)
LOC122328020 LOC568664 coding upstream 217399 1274434 ~ 1285114 (+)
LOC122327993 NA coding downstream 83839 1592160 ~ 1596619 (+)
LOC122327916 LOC107750708 coding downstream 173373 1681694 ~ 1687771 (+)
LOC122327989 LOC107749583,LOC107659620,LOC107655406,LOC107706642,LOC107690524 coding downstream 334962 1843283 ~ 1845298 (+)
LOC122328118 NA coding downstream 365898 1874219 ~ 1876084 (+)
LOC122328120 NA coding downstream 379290 1887611 ~ 1891509 (+)
LOC122328048 NA non-coding upstream 10032 1491444 ~ 1492481 (+)
G148255 NA non-coding upstream 74222 1378899 ~ 1428291 (+)
G148260 NA non-coding upstream 85061 1409917 ~ 1417452 (+)
LOC122328038 NA non-coding upstream 96406 1401845 ~ 1406107 (+)
G148251 NA non-coding upstream 143218 1340237 ~ 1359295 (+)
G148299 NA non-coding downstream 134789 1643110 ~ 1644215 (+)
G148312 NA non-coding downstream 191583 1699904 ~ 1777171 (+)
G148316 NA non-coding downstream 200117 1708438 ~ 1782010 (+)
G148319 NA non-coding downstream 207876 1716197 ~ 1727485 (+)
G148323 NA non-coding downstream 221303 1729624 ~ 1736041 (+)
G148222 NA other upstream 117666 1379291 ~ 1384847 (+)
LOC122327965 NA other upstream 353711 1137717 ~ 1148802 (+)
G148233 LOC107571167,LOC107662825,LOC107663547 other upstream 375283 1125486 ~ 1127230 (+)
G148214 wdr77 other upstream 485846 1015779 ~ 1016667 (+)
G147888 LOC107732183,LOC107723096,LOC107572363,LOC107698292,LOC107750676,LOC107656899 other upstream 708507 791234 ~ 794006 (+)
LOC122328040 NA other downstream 113671 1621992 ~ 1880883 (+)
G148295 NA other downstream 116151 1624472 ~ 1625190 (+)
LOC122327950 NA other downstream 118241 1626562 ~ 1639006 (+)
LOC122327951 NA other downstream 346546 1854867 ~ 1857142 (+)
G148388 NA other downstream 635564 2143885 ~ 2145560 (+)

Expression


Co-expression Network