G148316


Basic Information

Item Value
gene id G148316
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 1708438 ~ 1782010 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU219186
GTTTCCCGCCTTCACATCATCAGACGAGAGAAGAGATGTTTTCTTGAGGGACAGTTATTTTCATCAAACATCACAAGGgtccatttatttttggaaataaaatatgtgccaAAATTAATCAATCATAATAAGCACTAAAATATTGCTGATATTGATTTccttaataaactaataatgatACTAACTCTAGTTTCTCCAGCTTgaattgtgtgttcatcagtagatCACTGAGGTGTTTCACTCCAGAGTCTCTGAGTTCATTCCCGCTCAggttcagttctctcaggtgtgatgggtttgatttcagagctgaagtcaggatgagactctgtttctctgtaatactgcatccacacagactgaagacagaaagagaaaagacaatGAATCAGACACGTTATGTTCATG
>TU219188
CTGATATTGATTTccttaataaactaataatgatACTAACTGTAGTTTCTCCAGCTTgaattgtgtgttcatcagtagatCACTGAGGTGTTTCACTCCAGAGTCTCTGAGTTCATTCCTGCTCAGgttcagttctctcaggtgtgatgggtttgatttcagagctgaagtcaggatgagactctgtttctctgtaatactgcatccacacagactgaagacagaaagagaaaagacaatGAATCAGACACGTTATGTTCATGTGTGACTTAAATTAATCACGAGAAAACAATATACagttcatt
>TU219189
CCTTCATAACGTCTAACTGCTGTAGAGTATAATGATACTAACTGTAGTTTCTCCAGCTTgaattgtgtgttcatcagtagatCACTGAGGTGTTTCACTCCAGAGTCTCTGAGTTCATTCCCGCTCAggtccagttctctcaggtgtgatgggtttgatttcagagctgaagtcaCAGCAGAACAACCTTCTTCTGTCAAACCACAGCTGCTTAACCTAcattgagaaaaagagagaagattTATATACTTATGTATTAGTTGATTATTCATGTATGTTATATTagtcatttacattatattgttgtttttttatttttcatgattgtttcatttacatttacatttacatttagtcattttgcagacgcatttatccaaagcaacttacaattgagagtacaacagcgattcatatttttgagagacaaacagacagagtaagtgcttataacacccagtcacagggagtgttcaaattagtacatgccagaaggaaggaataaacaaggggaggagaagtgagacAGAGCCAGTGagagcattccggatatgta
>TU219191
CTGATATTGATTTccttaataaactaataatgatACTAACTGTAGTTTCTCCAGCTTgaattgtgtgttcatcagtagatCACTGAGGTGTTTCACTCCAGAGTCTCTGAGTTTATTCCAGCTCAGgttcagttctctcaggtgtgatgggtttgatttcagagctgaagtcaggatgagactctgtttctctgtaatactgcatccacacagactgaagacagaaagagaaaagacaatGAATCAGACACGTTATGTTCATGTGTGACTTAAATTAATCACGAGAAAACAATATACagttcatt
>TU219194
CTGATATTGATTTccttaataaactaataatgatACTAACTGTAGTTTCTCCAGCTTgaattgtgtgttcatcagtagatCACTGAGGTGTTTCACTCCAGAGTCTCTGAGTTCATTCCTGCTCAGgtccagttctctcaggtgtgatgggtttgatttcagagctgaagtcaggatgagactctgtttctctgtaatactgcatccacacaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU219186 False 408 lncRNA 0.38 2 1724916 1782010
TU219188 False 305 lncRNA 0.38 2 1708438 1711787
TU219189 True 556 lncRNA 0.37 2 1724220 1725614
TU219191 False 305 lncRNA 0.37 2 1708438 1711787
TU219194 False 214 lncRNA 0.41 2 1708438 1724435

Neighbor

gene id symbol gene type direction distance location
LOC122327916 LOC107750708 coding upstream 20667 1681694 ~ 1687771 (+)
LOC122327993 NA coding upstream 111819 1592160 ~ 1596619 (+)
LOC122327926 LOC568664 coding upstream 200117 1502513 ~ 1508321 (+)
LOC122327918 LOC107710809,LOC107574827,LOC107667624,LOC107698297,LOC107575765,LOC107570670 coding upstream 263066 1437791 ~ 1445372 (+)
trnam-cau_116 NA coding upstream 276061 1432305 ~ 1432377 (+)
LOC122327989 LOC107749583,LOC107659620,LOC107655406,LOC107706642,LOC107690524 coding downstream 61273 1843283 ~ 1845298 (+)
LOC122328118 NA coding downstream 92209 1874219 ~ 1876084 (+)
LOC122328120 NA coding downstream 105601 1887611 ~ 1891509 (+)
LOC122328023 irf6 coding downstream 119756 1901766 ~ 1907032 (+)
eps8l3a LOC107662821,LOC107711382,LOC107571173,LOC107725338,LOC107698279,LOC107599104 coding downstream 126075 1908085 ~ 1915043 (+)
G148299 NA non-coding upstream 64223 1643110 ~ 1644215 (+)
G148224 NA non-coding upstream 161545 1489399 ~ 1546893 (+)
LOC122328048 NA non-coding upstream 215957 1491444 ~ 1492481 (+)
G148260 NA non-coding upstream 290986 1409917 ~ 1417452 (+)
LOC122328038 NA non-coding upstream 302331 1401845 ~ 1406107 (+)
LOC122328047 NA non-coding downstream 20105 1802115 ~ 1804212 (+)
G148351 NA non-coding downstream 63806 1845816 ~ 1846360 (+)
LOC122328035 NA non-coding downstream 72217 1854227 ~ 1854741 (+)
LOC122328036 NA non-coding downstream 95678 1877688 ~ 1878461 (+)
LOC122328033 NA non-coding downstream 110342 1892352 ~ 1894308 (+)
LOC122327950 NA other upstream 69432 1626562 ~ 1639006 (+)
G148295 NA other upstream 83248 1624472 ~ 1625190 (+)
G148222 NA other upstream 323591 1379291 ~ 1384847 (+)
LOC122327965 NA other upstream 559636 1137717 ~ 1148802 (+)
G148233 LOC107571167,LOC107662825,LOC107663547 other upstream 581208 1125486 ~ 1127230 (+)
LOC122327951 NA other downstream 72857 1854867 ~ 1857142 (+)
G148388 NA other downstream 361875 2143885 ~ 2145560 (+)
LOC122327475 NA other downstream 1177090 2959100 ~ 2963003 (+)
loxl5a loxl5a,LOC107698563,LOC107549379,LOC107733348,LOC108430202,LOC105011451 other downstream 1262628 3044638 ~ 3048132 (+)
LOC122327293 myo9b,LOC107566354,LOC107702620,LOC107549373,LOC107698595,LOC107718479 other downstream 1332191 3114201 ~ 3153581 (+)

Expression


Co-expression Network