LOC122328036


Basic Information

Item Value
gene id LOC122328036
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 1877688 ~ 1878461 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006247751.1
CAATTctggtttaaagaaaaaaagaatcgCATAGTTTAACTCAATGACAGTTTTTCTGCGTGTCTGCAGGCGGGGCGCAGGGCAGCTCTCTCCAGCAGCGCTTCTTCTTTCGGTTTCGATGCCTGTGGATAAATGGCGTCAGAAGCAGGCAGACGTAGTCCACCATTTGATCGTCCTGACATGAGCGACCTGAGGGTCGTGCTTCTAGGAAAGAACAGATCAGAAAACAGACGGGTGGCAAAGGCTTTACTGGATACAATAGTGTTTGACGTGAAGCTCCGTC

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0055114 oxidation-reduction process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006247751.1 True 283 lncRNA 0.49 3 1877688 1878461

Neighbor

gene id symbol gene type direction distance location
LOC122328118 NA coding upstream 1604 1874219 ~ 1876084 (+)
LOC122327989 LOC107749583,LOC107659620,LOC107655406,LOC107706642,LOC107690524 coding upstream 32390 1843283 ~ 1845298 (+)
LOC122327916 LOC107750708 coding upstream 189917 1681694 ~ 1687771 (+)
LOC122327993 NA coding upstream 281069 1592160 ~ 1596619 (+)
LOC122327926 LOC568664 coding upstream 369367 1502513 ~ 1508321 (+)
LOC122328120 NA coding downstream 9150 1887611 ~ 1891509 (+)
LOC122328023 irf6 coding downstream 23305 1901766 ~ 1907032 (+)
eps8l3a LOC107662821,LOC107711382,LOC107571173,LOC107725338,LOC107698279,LOC107599104 coding downstream 29624 1908085 ~ 1915043 (+)
LOC122328121 NA coding downstream 53130 1931591 ~ 1940567 (+)
LOC122328122 NA coding downstream 63689 1942150 ~ 1949367 (+)
LOC122328035 NA non-coding upstream 22947 1854227 ~ 1854741 (+)
G148351 NA non-coding upstream 31328 1845816 ~ 1846360 (+)
LOC122328047 NA non-coding upstream 73476 1802115 ~ 1804212 (+)
G148331 LOC107574083 non-coding upstream 82613 1748439 ~ 1795075 (+)
G148330 NA non-coding upstream 85387 1746931 ~ 1792301 (+)
LOC122328033 NA non-coding downstream 13891 1892352 ~ 1894308 (+)
LOC122328051 NA non-coding downstream 21731 1900192 ~ 1901491 (+)
G148344 NA non-coding downstream 39120 1917581 ~ 1918823 (+)
LOC122328043 NA non-coding downstream 77753 1956214 ~ 1957580 (+)
LOC122328034 NA non-coding downstream 115233 1993694 ~ 2013560 (+)
LOC122327951 NA other upstream 20546 1854867 ~ 1857142 (+)
LOC122327950 NA other upstream 238682 1626562 ~ 1639006 (+)
G148295 NA other upstream 252498 1624472 ~ 1625190 (+)
G148222 NA other upstream 492841 1379291 ~ 1384847 (+)
LOC122327965 NA other upstream 728886 1137717 ~ 1148802 (+)
G148388 NA other downstream 265424 2143885 ~ 2145560 (+)
LOC122327475 NA other downstream 1080639 2959100 ~ 2963003 (+)
loxl5a loxl5a,LOC107698563,LOC107549379,LOC107733348,LOC108430202,LOC105011451 other downstream 1166177 3044638 ~ 3048132 (+)
LOC122327293 myo9b,LOC107566354,LOC107702620,LOC107549373,LOC107698595,LOC107718479 other downstream 1235740 3114201 ~ 3153581 (+)
tma7 NA other downstream 1345156 3223617 ~ 3224491 (+)

Expression


Co-expression Network