LOC122327119


Basic Information

Item Value
gene id LOC122327119
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 6971840 ~ 6973715 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006247598.1
GGGGATATTCCGATGTAAGCTGCATTGCTCTCTCACTCCCACGCGCCGGCTTGACGCAAATCCTCGCGTGGGCGGTGCCGCGCGTGGGACGGAATAccgagcgagaaagagagagaagaccTGAACGGTCACACGCGgtttggagaaatcgAGCGTCGCCATCGCTCAGcggtggatgggtgccgtcagaataagagcccaaacaagctgataaaaacatcatagcGACGGATGACTCCAGTTCATTGATTAACATCCATTAAAGTGGAAAACTACATGTGTACTTTTTatcccgacggcacccattcaccacaGAGGATCCACCGATGAGCAAGCCATGTAACGCTAAATATCTCCAGCCgagctcatctacatctcggaaaGCCTGAGGGTGactacatttttcatttgatgaaccgtttcttttcattataacatttaaactCTTAAACCAGGAGcagcaaaatatttttggttctCGGAAATGCTTGCTGTAACGTTTAAACAACGCAAGGCTGTTTTGCAGCTTACAATGCCGATTGCATTTATGCATCGAATGACAGCGAGCAAACCCCGCAGGAAATTTACTCACGCTCTGTTGGGCGCAAAATCCCCCCCGAAACCCACTTGAGCACACCGCTCTACAAATGCGCATTCAGAATGGTCAGAAAGTTTTTTCCTTCGTACATCTCAATAAAATTACAGCTTTCAACAGACGCCTAAACCGACGCCACAGCAGAATCTACCTATGAAAATTAAACGACGCTTGGTTTTTGCTCTAGCTTGACAAATGCACGAGctgcatattaaaaaatgaaacgcAGTCGTGCATCTTAAAGGCTGGATCTTTAGATAGAGGGGTGCATCAGCAGCCTCCCATCTGCCTGAGCATCTTGAGCTATTTTGGGAAGGAGGCTGGGCACAGCGAACAGCCCCTGGGAGGAAGTGCGTGGTGGATGCTGTCAACCCCCACTTTCGTGTTGGTCTATTCctcaaaacaaaagcttttccAAGATATCTTCCATCTCATGTGACAAAAATGACAAGCACCTCGCCTGCAATCACGGATCCTTTTACCGGGGTTTCGCAAAGCGTATATCTGCTCTCAAGGGAACGGGATGATTTTCTGTGGTTTGCCATCGCAGCGACGCTCCCCGTCTTGTAAACAACGCATGTTTGTATCGTATGTCATTATTTCGGGTAGGGCTACGACGTTTGTAgcgtgtttttaaaataacgtgAAGCGATCATTTAGACGGAAGTTGCGAAGGATGGTAAAATAGTGTATCCGAAACATAGATGACAGCTAATAGCTAACATTTCATGTTGTATTACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006247598.1 True 1336 lncRNA 0.47 3 6971840 6973715

Neighbor

gene id symbol gene type direction distance location
stat1a LOC107754245,LOC107687870,LOC107600977,LOC107739326 coding upstream 147636 6811786 ~ 6824204 (+)
mstna LOC107586967,LOC107754254,LOC107687894,LOC107739355,LOC107653561 coding upstream 161201 6805135 ~ 6810639 (+)
ftcd ftcd,LOC107754243 coding upstream 166846 6798096 ~ 6804994 (+)
mmadhca zgc:92335,LOC107739332,LOC107754238,LOC107653595,LOC107600946,LOC107586989 coding upstream 256063 6710916 ~ 6715777 (+)
rnd3a rnd3a,LOC107600972,LOC107710934,LOC107653593,LOC107586959,LOC107687879,LOC108425727 coding upstream 322829 6638212 ~ 6649011 (+)
sh3bp4a sh3bp4a,sh3bp4,LOC107571706,LOC107687864,LOC107751470,LOC107739319,LOC107653607 coding downstream 435627 7409342 ~ 7438669 (+)
arl4ca arl4ca,arl4c,LOC107600967,LOC107739351,LOC105905671,LOC106575223 coding downstream 477032 7450747 ~ 7453436 (+)
aox6 aox6,LOC107600982 coding downstream 503927 7477642 ~ 7491019 (+)
LOC122327662 LOC107751463,LOC107687862,LOC107653569,LOC107739318,LOC107571702,LOC107687887,LOC107751488,LOC107565490,LOC107565491 coding downstream 526384 7500099 ~ 7501260 (+)
LOC122327665 LOC107751463,LOC107653569,LOC107687862,LOC107739318,LOC107687887,LOC107571702,LOC107751488,LOC107565491,LOC107565490 coding downstream 529456 7503171 ~ 7504323 (+)
G150403 NA non-coding upstream 7722 6846886 ~ 6964118 (+)
G150417 NA non-coding upstream 104996 6866212 ~ 6866844 (+)
G150408 glsa,LOC107586966,LOC107687871,LOC107754246,LOC107653599,LOC107600978,LOC107739327 non-coding upstream 140468 6828504 ~ 6831372 (+)
G150378 NA non-coding upstream 237032 6733286 ~ 6734808 (+)
G150300 NA non-coding upstream 606739 6363605 ~ 6365101 (+)
G150505 NA non-coding downstream 31208 7004923 ~ 7005720 (+)
G150508 NA non-coding downstream 47287 7021002 ~ 7021899 (+)
G150513 NA non-coding downstream 76540 7050255 ~ 7060836 (+)
G150548 NA non-coding downstream 179518 7153233 ~ 7154329 (+)
G150553 NA non-coding downstream 203911 7177626 ~ 7180206 (+)
G150369 NA other upstream 262949 6708488 ~ 6708891 (+)
ccnt2b ccnt2b,LOC107593034,LOC107663476,LOC107739335,LOC107586955,LOC107653589,LOC107745988 other upstream 461384 6502914 ~ 6510456 (+)
npb npb,LOC107663585,LOC107587005,LOC107756033,LOC107704419,LOC107593099 other upstream 732483 6236117 ~ 6239357 (+)
G149895 NA other upstream 779181 6191647 ~ 6192659 (+)
LOC122327524 NA other upstream 959159 5923907 ~ 6012681 (+)
G150756 NA other downstream 1193734 8167449 ~ 8168272 (+)
G150862 s1pr1,LOC107715096,LOC107592715,LOC107669844,LOC107653630,LOC107588065 other downstream 1640574 8614289 ~ 8617605 (+)
pdzk1ip1 NA other downstream 1916907 8890622 ~ 8892199 (+)
G150940 NA other downstream 1927428 8901143 ~ 8902311 (+)
G150945 NA other downstream 1945564 8919279 ~ 8919780 (+)

Expression


Co-expression Network