G150378


Basic Information

Item Value
gene id G150378
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 6733286 ~ 6734808 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU222574
CTGGCGATCTTGTCACTACACGACATTGTTAGCAGTCGTTCTCCCTGCAACACTCCATCCCAGGTCTGGATGGTGTTACTCGTACGAACGGGTATCGTACCTTCTCCAGACTCAATCTTGGTTCGTAGTTGTCCGCGAGCCTTGCGGTTTGGATGCCGGTCGCCCTGGTCTGGAAAGAACGAGCTGGAATTtagtttacagcattttaaaaactggTCCATATTTTGCTGTGCCGTACGACAACCAAATGAGCAAATCCATCCATCATAATTTTTTATACCCTCGGCACCAGCCTCATGAGGGGAGAAGATCCGGGCATCTCCGCAGGGCGACGTGCTGATATACAGATGGAACTGAATATCCTCTTTTAGCCGGTAGCCATGTTCGCTACACCATCTGAATATGGATTTCTCACGCTCCTCAGTGCTCTCGCTaaatagaaaacacacacacacacacacacacacacacacacacaaacttgtgAGATCTGTGATGTCAACAGAGACCAGTAAAAGGGCTTTGAAATGTCTATAATTGAAAATAGGTCCTTGGCCTGACACCCATGTCATCAAATCTGTCATTTATAATTTCACAGCAAATAAAGGCCATGTCTAATTGATTACGCACACATATCCATGTCCCTATCAATTCATGCTAACGGGCATCTGAGAAATTGATCCGAAAAAAATTCTTCTTGTGAATGATCTGTCCATTTTTAAAAGGGACGATCAGAGTATTTTCACCActcaaataatattacatatttttattatttactaattagttatttgaaggcaaagggtggtcacaccaaatatagatttgatttagatttctcttttgttcattcactgtattttgttcatttatgaaaataaatattttacacttacatttttgaaagcactgtttgtttacagcatttttttcacacctgcctaaaacttttgcacagtactgatatatatatatatatatatctatacatatacatacacacacacagtatatatatatatatggtaataaCAGCATGGAAATTATATATTAGTATCAATTTGATATTAATGGTGTTCCTCAGGGATCTGTTCTAGGGCCTCTAGTTTCCATCATCTCTTTATTTCTATTAAGTCACATTATccattgccattttttttttacttaagacATAGCTAAACGACTGACTACTTTTCACTTTGTTATTCTAATTTTACAGTCTTATGATCTCTACATTCAATATACCTGTATGCATGTAAgacattatgtaaaataaacatattattctaatgaaaatgtataattgcaaTATATGTACGTGTATCACCTGAGAAAGTATTCCAGCTGACCGTACAGGTATCTGATGAGGGAGCGACGCGCGATGATCTCAGCATGGCAGTCGTTGAGGGCCAGTCCTCGATCACTCATGTACTCCCCATTTATACATTTGGTTCCTGTGGTGACGCAAATCACCTGGGCATCCTTCACATCCGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU222574 True 1495 lncRNA 0.38 2 6733286 6734808

Neighbor

gene id symbol gene type direction distance location
mmadhca zgc:92335,LOC107739332,LOC107754238,LOC107653595,LOC107600946,LOC107586989 coding upstream 17509 6710916 ~ 6715777 (+)
rnd3a rnd3a,LOC107600972,LOC107710934,LOC107653593,LOC107586959,LOC107687879,LOC108425727 coding upstream 84275 6638212 ~ 6649011 (+)
LOC122327191 r3hdm1,LOC107586957,LOC107739334,LOC107593074 coding upstream 114378 6579007 ~ 6618908 (+)
mgat5 mgat5,LOC107745986,LOC107739338,LOC107663499,LOC107653587 coding upstream 260565 6419658 ~ 6472721 (+)
mrasb mras,rasm,LOC107663675,LOC107587007,LOC107653555,LOC107593037,LOC108425734 coding upstream 348021 6377692 ~ 6385265 (+)
ftcd ftcd,LOC107754243 coding downstream 63288 6798096 ~ 6804994 (+)
mstna LOC107586967,LOC107754254,LOC107687894,LOC107739355,LOC107653561 coding downstream 70327 6805135 ~ 6810639 (+)
stat1a LOC107754245,LOC107687870,LOC107600977,LOC107739326 coding downstream 76978 6811786 ~ 6824204 (+)
sh3bp4a sh3bp4a,sh3bp4,LOC107571706,LOC107687864,LOC107751470,LOC107739319,LOC107653607 coding downstream 674534 7409342 ~ 7438669 (+)
arl4ca arl4ca,arl4c,LOC107600967,LOC107739351,LOC105905671,LOC106575223 coding downstream 715939 7450747 ~ 7453436 (+)
G150300 NA non-coding upstream 368185 6363605 ~ 6365101 (+)
G150296 NA non-coding upstream 379618 6352762 ~ 6353668 (+)
G150294 NA non-coding upstream 383616 6347418 ~ 6349670 (+)
G149949 crygs1,LOC107756035,LOC107586953 non-coding upstream 413245 6319805 ~ 6320041 (+)
G149948 NA non-coding upstream 413945 6318985 ~ 6319341 (+)
G150408 glsa,LOC107586966,LOC107687871,LOC107754246,LOC107653599,LOC107600978,LOC107739327 non-coding downstream 93696 6828504 ~ 6831372 (+)
G150403 NA non-coding downstream 112078 6846886 ~ 6964118 (+)
G150417 NA non-coding downstream 131404 6866212 ~ 6866844 (+)
LOC122327119 NA non-coding downstream 237032 6971840 ~ 6973715 (+)
G150505 NA non-coding downstream 270115 7004923 ~ 7005720 (+)
G150369 NA other upstream 24395 6708488 ~ 6708891 (+)
ccnt2b ccnt2b,LOC107593034,LOC107663476,LOC107739335,LOC107586955,LOC107653589,LOC107745988 other upstream 222830 6502914 ~ 6510456 (+)
npb npb,LOC107663585,LOC107587005,LOC107756033,LOC107704419,LOC107593099 other upstream 493929 6236117 ~ 6239357 (+)
G149895 NA other upstream 540627 6191647 ~ 6192659 (+)
LOC122327524 NA other upstream 720605 5923907 ~ 6012681 (+)
G150756 NA other downstream 1432641 8167449 ~ 8168272 (+)
G150862 s1pr1,LOC107715096,LOC107592715,LOC107669844,LOC107653630,LOC107588065 other downstream 1879481 8614289 ~ 8617605 (+)
pdzk1ip1 NA other downstream 2155814 8890622 ~ 8892199 (+)
G150940 NA other downstream 2166335 8901143 ~ 8902311 (+)
G150945 NA other downstream 2184471 8919279 ~ 8919780 (+)

Expression


Co-expression Network