G149948


Basic Information

Item Value
gene id G149948
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 6318985 ~ 6319341 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU221900
CCACACATTTATTGATTCGGCACAGGTGTGTCGGTGCTGTCATGGTTGGGTGGTTTGGAGGCAAGGGAACACTGCAGATGGATGGATTTCCAGTTCAGACGTCACTCCGTCAGGCGTTTGAAGGATTGAACCGTGGGGCAGACGGCGCCCCATTCCACGGGTTTACGGTATTCCCCCTTCTCCAGTAGGTACTGGCGCCCCTGTAGTTTGGGTGCTCGTAGAAGATCCAGATCCCGTCTAGCACCTTACAGGAGTGGACCTCGCGTGTCCGAAAGCGCTCCACCATGGATGGACAATCCTCGGTGGTCTCGTACACCTGGCCCGCGAAATCTCCTTTGTCATAGAGCTGGATCTTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU221900 True 357 lncRNA 0.55 1 6318985 6319341

Neighbor

gene id symbol gene type direction distance location
LOC122327481 NA coding upstream 2689 6314884 ~ 6316296 (+)
LOC122327484 NA coding upstream 6427 6310669 ~ 6312558 (+)
sgsh sgsh,sphm,LOC107756031,LOC107704414 coding upstream 83625 6231272 ~ 6235360 (+)
bcor bcor,LOC107756025,LOC107745971,LOC107593046 coding upstream 249065 6022006 ~ 6069920 (+)
LOC122327535 NA coding upstream 310799 6006482 ~ 6008186 (+)
LOC122328229 krt97,krt96,LOC107663680,LOC107745983,LOC107739339,LOC107593038 coding downstream 24780 6344121 ~ 6347334 (+)
mrasb mras,rasm,LOC107663675,LOC107587007,LOC107653555,LOC107593037,LOC108425734 coding downstream 58351 6377692 ~ 6385265 (+)
mgat5 mgat5,LOC107745986,LOC107739338,LOC107663499,LOC107653587 coding downstream 100317 6419658 ~ 6472721 (+)
LOC122327191 r3hdm1,LOC107586957,LOC107739334,LOC107593074 coding downstream 259666 6579007 ~ 6618908 (+)
rnd3a rnd3a,LOC107600972,LOC107710934,LOC107653593,LOC107586959,LOC107687879,LOC108425727 coding downstream 318871 6638212 ~ 6649011 (+)
G149913 NA non-coding upstream 95202 6223257 ~ 6223783 (+)
G149892 NA non-coding upstream 127595 6189117 ~ 6191390 (+)
G149891 mid1ip1b,LOC107756028,LOC107663600,LOC107704421,LOC107593044,LOC107745972,LOC107586944 non-coding upstream 131115 6185969 ~ 6187870 (+)
LOC122327601 NA non-coding upstream 158262 6115049 ~ 6160723 (+)
LOC122327604 NA non-coding upstream 220459 6097872 ~ 6098526 (+)
G149949 crygs1,LOC107756035,LOC107586953 non-coding downstream 464 6319805 ~ 6320041 (+)
G150294 NA non-coding downstream 28077 6347418 ~ 6349670 (+)
G150296 NA non-coding downstream 33421 6352762 ~ 6353668 (+)
G150300 NA non-coding downstream 44264 6363605 ~ 6365101 (+)
G150378 NA non-coding downstream 413945 6733286 ~ 6734808 (+)
npb npb,LOC107663585,LOC107587005,LOC107756033,LOC107704419,LOC107593099 other upstream 79628 6236117 ~ 6239357 (+)
G149895 NA other upstream 126326 6191647 ~ 6192659 (+)
LOC122327524 NA other upstream 306304 5923907 ~ 6012681 (+)
lsm7 lsm7,LOC107593053,LOC107704434 other upstream 470399 5847131 ~ 5848586 (+)
hyal2b hyal2b,LOC107695624,LOC107756016,LOC107586928,LOC107704436,LOC107593055 other upstream 494883 5810478 ~ 5824102 (+)
ccnt2b ccnt2b,LOC107593034,LOC107663476,LOC107739335,LOC107586955,LOC107653589,LOC107745988 other downstream 183573 6502914 ~ 6510456 (+)
G150369 NA other downstream 389147 6708488 ~ 6708891 (+)
G150756 NA other downstream 1848108 8167449 ~ 8168272 (+)
G150862 s1pr1,LOC107715096,LOC107592715,LOC107669844,LOC107653630,LOC107588065 other downstream 2294948 8614289 ~ 8617605 (+)
pdzk1ip1 NA other downstream 2571281 8890622 ~ 8892199 (+)

Expression


Co-expression Network