G18302


Basic Information

Item Value
gene id G18302
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 8346673 ~ 8349134 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU20568
TTGGGAACTGGAGGGATTTATTCACAGACGTTATCAGAAGTAAATGTTACAGAAAGTCAGGTCAGTTTGTTTTACATTTTATTTTATGGTGGTTGGAACACAAGACACAAGTAATAAAGTTAGTAATGGTAACGTCATGCCTCTCATTCTGTGCACTGCCCATCAGGTCTAGTTCAATCAATCTAAACAGTAGTTTACAAATGCCAGACTGAGAATCCTCTTAAGACATAAATAAGATACTGAAAATAGTATTTGTACAGTAAATAGTATTTTTGTAGAGTCCAGAACCACTATTATCGAGGCCTTCTGGAAATTCTCATAAGCATTATTAATATAATTATTAACATTTATGAATTAATTTACATGATGGGAATGAGGCTAATATACTGGCAAAGTGAGAGCACAGAACAATATGGACATGAACTTTTGTCACCCATGAACGGTGAATGATTTTAAGGCATTTCTCAGTTTCCATTCACACAGCAGATTTCCATGGCGGTTCTCACAATTAGCCTCATCCCTTGAGAGCAAAGCTACTGGAGGATGTCAAAAAATAACTCCCATTATTATAAAAGAGATCAAAAATCGAGTCCGCTGGAAAAGTGAAGGTGAGGGCGCTATACTAAAAAGGGTGGATGGTCCATACAGCTCTTGCAGTAACGAAGGGCTCCCGGTCTCAGACATCGTGTGACGGCCGATCAAACCCCAGACACAGATTATTCCCCGATCCCTCCCCTCGCTCAGGATATGCCGTGTAAAGACAAGTCAGACTCGCTTCCAGTGTATAATACTAAAACAAAACCTCAGTAACAAATTTACACAGGGCTGTACATGATTATGATGATGATCTTGCATGTCCCAGGGTTTGTTAAAAAAAAGAAAATTACAAAAAAAGAGGCATTAAAAATAAGATACGATGATACTTATTTGTATATTGCAAAGCATCTTGTATCAAACTCATATTTCTTGCACGGAGACAGCACCACAGCATTGCATTTGTCTTGGAACAGGTTACAAAAACCATTTTGACTTGACAAACCCATGCATTAATATTTTCACTGGTTACCGTTGAACATGAACAGCTGTTATGGGGGCCACAGTCATAGGATGCAAGGGGTCTACATACATCATCCCTTTTTTATAGCAAGTGCTGACAGCATTTTAAAGCGACATTTTCATTTGATACATGATAGAAAAAAAAATAATTCAGTGAATACATGATTTTTGTTCGATGACGGAACATGCCAAGAATGTCAATGCTGTTTTTGTCCACCTGATGTGTTTTGAGTCTCTCATCTCTTCCTGTGTTACAGCGCCTCCCAAAGTTGAGTTGTTGCAACAGCCATTTTTTCCAACACACACACATGCACACAAGAAGTCCAGATTGACAAATAGCAGGTATATATATATATAAAAAAATTTCAATATCTCCCAACTTGAATAGTCAGATGTCCAGATTGCAATGTAGTCAGCTACATTTCTGCCCTGAATGGAATGATGAAGAAAACCAAGGCAAAATCAACTTAACACTTAAAAAAGATGCATGCAACAAGTGGTCACATAGTATATATATCTATATATATCTATATATGTAATTGCTCTTTAGATATGCACAACACAATAATGACATTTGCATGATAAAAACAATGGTGAATTTTGAGGAATGCTAAATGTTACGTCAGCTACTATCAGTTTGGGATTCAAAAGCTCCAAGTTTTGAGCTTTCGCCCCTGTTAGTGGTATCATAAATGAGGAACATCGTACATAGTCTTGCTCAGTGTATTTAACAGTTGCTGTCATGTGTCGATAAAGCGGAAAAAGTCGTTTCTTTTAGACGTAGTAACGGACCACAGCAACAGCTCAGAGGAATGTTTGGTGACTGCCGGACAGCGAGCGAGAGCTATGGCACCGAGAGAAGGCAATCCAGACGGTACAAACAGCACCAGTCTCATCTGCCACTGTTCAAGTAATAAGCAAGTACATGTTCTGTTGTTTGTCACAGAAACGTAATATGACTTTTTGCTTGTCTTGTGACACCATGTTCGCCGACTGAGGATGTGATTATGGCTGGACGCAAAGACGGGGAAAAAAAACAAACCAAAAAAACAAAATTATAATTAAAACAATGTAATTTTTCCAATATAAAAGGCAAAGAAAAGTATACAAAAAATAGAAAAATAATTACAGCAGTAGACATGGTGTTGGGAGGAACGGTGGTGCCAGACTATTTGGCAGAACAGTGTAATATTTTGGGACTGTTTAAGGCGTCCTCCACCAGATGTAGGTCCACCCCGTCGACTATCACGTCTTTCACGCAGCCGACAAAGCCTGTGCTGTAAGCCTTGGGCAACCGGCGAGCTACAGACAGCTCTTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU20568 True 2375 lncRNA 0.27 2 8346673 8349134

Neighbor

gene id symbol gene type direction distance location
CI01000001_08245959_08246775 NA coding downstream 99898 8244652 ~ 8246775 (-)
CI01000001_08190314_08198511 NA coding downstream 147902 8190205 ~ 8198771 (-)
CI01000001_08109635_08112413 NA coding downstream 234156 8109610 ~ 8112517 (-)
CI01000001_08036532_08037745 HER9, HES4 coding downstream 308669 8036226 ~ 8038004 (-)
CI01000001_07953501_07958007 NA coding downstream 388666 7953233 ~ 7958007 (-)
CI01000001_08386044_08386700 RNF223 coding upstream 36244 8385378 ~ 8387124 (-)
CI01000001_08454713_08460418 ARHGEF19 coding upstream 105261 8454395 ~ 8460567 (-)
CI01000001_08475428_08494279 ANO7L1, ANO11 coding upstream 124428 8473562 ~ 8494279 (-)
CI01000001_08496771_08508424 PLEKHM2 coding upstream 147475 8496609 ~ 8509910 (-)
CI01000001_08511118_08515391 DDOST.S, DDOST coding upstream 161984 8511118 ~ 8515920 (-)
G18311 NA non-coding downstream 1340 8341871 ~ 8345333 (-)
G18309 NA non-coding downstream 89810 8254233 ~ 8256863 (-)
G18375 NA non-coding downstream 129446 8200622 ~ 8217227 (-)
G18300 NA non-coding downstream 261727 8084732 ~ 8084946 (-)
G18277 NA non-coding downstream 314185 8032205 ~ 8032488 (-)
G18313 NA non-coding upstream 25597 8374731 ~ 8376926 (-)
G18513 NA non-coding upstream 65819 8414953 ~ 8418574 (-)
G18536 NA non-coding upstream 270186 8619320 ~ 8619809 (-)
G18537 NA non-coding upstream 271348 8620482 ~ 8620735 (-)
G18492 NA non-coding upstream 307948 8657082 ~ 8657338 (-)
G18223 NA other downstream 418156 7926104 ~ 7928517 (-)
G18023 NA other downstream 589153 7756501 ~ 7757520 (-)
G17911 NA other downstream 1093419 7251311 ~ 7267952 (-)
CI01000001_06932075_06937182 NA other downstream 1409450 6931621 ~ 6937231 (-)
G17789 NA other downstream 1456259 6837525 ~ 6890414 (-)
CI01000001_09804494_09811219 NA other upstream 1460523 9804429 ~ 9811219 (-)
G20136 NA other upstream 2189893 10539027 ~ 10539850 (-)
CI01000001_10862471_10864514 NA other upstream 2513091 10862225 ~ 10865770 (-)
G20230 NA other upstream 2672993 11022127 ~ 11028777 (-)
G20319 NA other upstream 2761703 11110837 ~ 11114747 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
tiger barb (Puntius tetrazona) G157799 NA non-coding NC_056721.1 CM032090.1 13742257 ~ 13747171 (-)