G17753


Basic Information

Item Value
gene id G17753
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 9971792 ~ 9973317 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU19916
TTTTAGATTTTCCAACAGTTTTTTGCATCTCGAACTGGTTCCCTTCTCTTTCTGTGTAACATTTTTCATCCACCTGCTGAAGCACTTATACAAGTGACATTCCATAATATTTCACCAGATAAAACTGTTTGCTATTGGCTCAAGAACACAGAGTAACACTACTTCTAGAAGTGGTTAATTATTACAGCAGGAGCTGATAAAGCCGGCCCCACCTGCCGTGCTGGCATCATCCACCAGTATGATTTCTTTGAGGAAGATCGCCGGGGAGGTGTGCAGCACGCTGTACACGGTGCGCAGAAGTGTTGACCATGCCTCGTTGTGAAACACAATGATCACACTTGTGGTGGGAAGAGAAGGACAGCGGCGAAACTTTCGCTCGACGCACTCGGGCGGACGGGTGTCTTCTCCAAGACTGCGGTGCAAGGAGATTCGGTCACTGGCAAACTGGTTAAAGCAGTGCCTGGTCATGCCCTCCTGCTTTTCCTTCTCCTCTTCCGTAGACATACTGGCTTTCTGGAAGGCTGCAGCATTGGCTCCCGGGGCCTGAGGGTCCTGTGGAGGTCTCTCGATGTACGGTTTGAGTTCCGCCTGAGTGTAGAAGCCCGGGGGGCAATTTCGGTCTGGGGTGGGTTGTATTACCACTGATGGGGGCTGAGGGGCTCCAATTTGGAAGGCAAAATTATTGACCGCTCCGCGGACCATTTCAAGGACCTGCTCCTTTTTGTTGGAGAGATCTTGCAACCAGGGGTCCTGAAGTGCACCACTGCCAACGTCCCTCTGGATCACCACCAGAATTACCATGAAAAGTGTGCCGCCCAAAACTGCAAGCTTTAGGGGGGAGAAACGACGTCTCAGACGCATTCTGTTGGTCGATTTCAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU19916 True 880 lncRNA 0.45 2 9971792 9973317

Neighbor

gene id symbol gene type direction distance location
CI01000001_09946111_09958162 NA coding upstream 13546 9944120 ~ 9958246 (+)
CI01000001_09932205_09934551 NA coding upstream 36620 9931155 ~ 9935172 (+)
CI01000001_09782626_09784851 NA coding upstream 186608 9782626 ~ 9785184 (+)
CI01000001_09582178_09593275 PTPN22 coding upstream 378509 9582178 ~ 9593283 (+)
CI01000001_09533674_09538902 NA coding upstream 432713 9533674 ~ 9539079 (+)
CI01000001_10072627_10081119 CACNB3, CACNB3A, CACNB3B coding downstream 99310 10072627 ~ 10081179 (+)
CI01000001_10093069_10104108 RND1B, RND1, RND1A coding downstream 119585 10092902 ~ 10105699 (+)
CI01000001_10141190_10146911 PTGES3, PTGES3A coding downstream 167873 10141190 ~ 10148058 (+)
CI01000001_10150798_10152858 MIPA coding downstream 177056 10150373 ~ 10152938 (+)
CI01000001_10321783_10325266 NA coding downstream 348330 10321647 ~ 10325305 (+)
G17751 NA non-coding upstream 5123 9963911 ~ 9966669 (+)
G17713 NA non-coding upstream 84636 9885585 ~ 9887156 (+)
G17709 NA non-coding upstream 108718 9855475 ~ 9863074 (+)
G17710 NA non-coding upstream 114610 9855862 ~ 9857182 (+)
G17694 NA non-coding upstream 166413 9804674 ~ 9805379 (+)
G18798 NA non-coding downstream 46786 10020103 ~ 10020323 (+)
G18804 NA non-coding downstream 50412 10023729 ~ 10023956 (+)
G18805 NA non-coding downstream 51411 10024728 ~ 10025029 (+)
G18807 NA non-coding downstream 52885 10026202 ~ 10026427 (+)
G18817 NA non-coding downstream 56137 10029454 ~ 10029691 (+)
CI01000001_09435836_09436037 NA other upstream 533729 9435836 ~ 9436373 (+)
G17354 NA other upstream 731115 9234463 ~ 9240677 (+)
G17353 NA other upstream 742933 9216022 ~ 9228859 (+)
G17234 NA other upstream 1939309 8032124 ~ 8032483 (+)
CI01000001_07531945_07539781 NA other upstream 2431206 7531541 ~ 7540586 (+)
G18896 NA other downstream 266583 10239900 ~ 10241492 (+)
G18873 NA other downstream 283795 10223879 ~ 10260714 (+)
G18872 NA other downstream 297829 10271146 ~ 10281369 (+)
CI01000001_10395420_10396473 NA other downstream 420240 10394851 ~ 10396705 (+)
G18937 NA other downstream 501667 10474984 ~ 10476389 (+)

Expression


Co-expression Network