G17710


Basic Information

Item Value
gene id G17710
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 9855862 ~ 9857182 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU19862
TTTTTTACATTTAAGAAAGGTCTGTTTGTGAGAGCGTTCATGAAGTGATAGTGATGCGACAGTGTATGTAGCATGTGTCTGGCTGCCAGAGCTGATGGTCAAGTCATGTCTCTTGGCAGCCAGCTTGAGGAGATGAGATGTGGCAGACGGGGCTTGGCAGGGCGAGGCCCTCACTGCTGTCTGTGCCAACTTGGTTGAATGCCAAGCCCTCGCTCTACATGGATTCCAGGGCAACAGAGCAAAAGAAAGCTTTCTTTCACCAACTAGGGCGGACTACTGGTCTGTGTAAGCTCTGTGTTAAGCTCCGTTCTGCTTCTCAGTGACTGAACAGTGCTCATTTAGCTGCCTTGGCATTTAAAGCGTTGTTTTTTTTCCATGATGGGCTGACGGATGGAGTTCCTATTTTGGTCCATAACTCAAAAAACTATTTTTATTCTATGCAGTTTGAGATTATATACCCACCTATCCATCAACCCAACCATCTGTCTTCTCATCTTGACCCAACCACATAGCTGTCCACTCAGCCATTTTTGTCTACACATCTGTACAGCTACAGTATCTCTCTACCCACTCAACTATCCGTTTTCTACCCAGCCATCTATTTTTCAACATCAGTCTGCATCATCTATCAGTCCAACCAAACGTATAGTTGTCTATCCACCTATCTGCTCATGTATCTACCAACCCATCTCTCTGTCTACACACCTATCTATCGGTCCACACAACTAACTGTCTACCCACCCAGCTAACCATCTGCTCAACTATCTACCCACCAATCTGTTTACACATCTAAGAACCCAATCATAGAGCCATCTACTTATCTCATACCCACCCACCCATCTATCCATCCATATATCTCTCAACTCATCCACCAACCCAACTATCTATTCATCTACCCAATCCTTTCCATCTACTCATTTATCTACGCACTCAACTATCCATCTCTACCCATCTATCAACTCATTCATCTACCCAACAGTCTATTTATCTACCCATTCATCTACTCATTTATCTCCAGTATCATTTATCTACCCAACTGTATTTTTAACTGTATGTCTATCCATACACCCATGTATTTATCTATCTACACAGCCATCTATCCACCTACCTGTACCCCCTATCTACAGTTTCTATCTACCCCTCAACTATCTACCATTTCTATACCAATCCATCTATCCACTCATTTATCCTGTCTACCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU19862 True 1200 lncRNA 0.43 2 9855862 9857182

Neighbor

gene id symbol gene type direction distance location
CI01000001_09782626_09784851 NA coding upstream 70678 9782626 ~ 9785184 (+)
CI01000001_09582178_09593275 PTPN22 coding upstream 262579 9582178 ~ 9593283 (+)
CI01000001_09533674_09538902 NA coding upstream 316783 9533674 ~ 9539079 (+)
CI01000001_09509892_09522047 NA coding upstream 332781 9509892 ~ 9523081 (+)
CI01000001_09491225_09507444 PFKFB1 coding upstream 347851 9490227 ~ 9508011 (+)
CI01000001_09932205_09934551 NA coding downstream 73973 9931155 ~ 9935172 (+)
CI01000001_09946111_09958162 NA coding downstream 86938 9944120 ~ 9958246 (+)
CI01000001_10072627_10081119 CACNB3, CACNB3A, CACNB3B coding downstream 215445 10072627 ~ 10081179 (+)
CI01000001_10093069_10104108 RND1B, RND1, RND1A coding downstream 235720 10092902 ~ 10105699 (+)
CI01000001_10141190_10146911 PTGES3, PTGES3A coding downstream 284008 10141190 ~ 10148058 (+)
G17675 NA non-coding upstream 19021 9763911 ~ 9836841 (+)
G17673 NA non-coding upstream 30803 9786036 ~ 9825059 (+)
G17694 NA non-coding upstream 50483 9804674 ~ 9805379 (+)
G17674 NA non-coding upstream 52529 9790940 ~ 9803333 (+)
G17602 NA non-coding upstream 279077 9576471 ~ 9576785 (+)
G17713 NA non-coding downstream 28403 9885585 ~ 9887156 (+)
G17751 NA non-coding downstream 106729 9963911 ~ 9966669 (+)
G17753 NA non-coding downstream 114610 9971792 ~ 9973317 (+)
G18798 NA non-coding downstream 162921 10020103 ~ 10020323 (+)
G18804 NA non-coding downstream 166547 10023729 ~ 10023956 (+)
CI01000001_09435836_09436037 NA other upstream 417799 9435836 ~ 9436373 (+)
G17354 NA other upstream 615185 9234463 ~ 9240677 (+)
G17353 NA other upstream 627003 9216022 ~ 9228859 (+)
G17234 NA other upstream 1823379 8032124 ~ 8032483 (+)
CI01000001_07531945_07539781 NA other upstream 2315276 7531541 ~ 7540586 (+)
G18896 NA other downstream 382718 10239900 ~ 10241492 (+)
G18873 NA other downstream 399930 10223879 ~ 10260714 (+)
G18872 NA other downstream 413964 10271146 ~ 10281369 (+)
CI01000001_10395420_10396473 NA other downstream 536375 10394851 ~ 10396705 (+)
G18937 NA other downstream 617802 10474984 ~ 10476389 (+)

Expression


Co-expression Network