CI01000001_09491225_09507444 (PFKFB1)


Basic Information

Item Value
gene id CI01000001_09491225_09507444
gene name PFKFB1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 9490227 ~ 9508011 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_09491225_09507444.mRNA
ATTTAAAAGAGCATTGATGGCTATATCTCCAACCACATCTTGAGAACAACAACACGTATCTGTTTTTTTCTGCAGGTGACAACATTTCAACATCCTGTCTGTGTGCTGCACAGCATATTGTTGTCACTACATCACAGCAGACCCATCTTAAATGAATATGTGCTCTATTCTTCTCTAGTATCATCACAGCAGGCTGTCTGCAGAGGAGATGTTACATTTTTAAGGCTGTGATATCAAATGACACATGGGGATCAGTGAACAACCTGAAATCAGGCACATGCAGAATCAGACAAGACACACTTGAAGGCCTAAGTCTGTCTGCAGTCTTACTAATCTTATTTACCACATCCTGACCAAGCTGCTTTTGAACTAGGCCTCATTGTGAAACAGTTACGTGATGCTAAATGGGTCATGAATTTGCTAAGAGCAATATTGGATTTTGTTCATTTTAAATTTGAAGATAACCATGTTTACAATGTCTTTTAGAATATATTTGTAAACTTTAATAAAGGATAAAACTGAATAAATACTGTAGATCAAAACCATTATAACGTGAGCTCTCTCTCTATACACACACACACACACACACACACACACACACACACATATATATATATACACTTTTAAAATAAAAAAAAAAAATCAAATTTTATTGTTTTGCAAGAGAACTTTGCAAATAAAGACACTATACATTCTAATTAAGTCTTACTGTGACAGTTTCTAAAATATATACGGCAACATATCTGAACATAATGTTTTATTTTTATTTAGAAATGGCTATCATTTTTCCCATGAAGCCAAAAGTGACAGGCTCAAAGCCTCCAAAGGGTTAATTAAGTCAATTACCAATGGCAGCCAGGATTCTGTCTCTCCACTGTGCCAACCTCCCAACTCTTCCCGCCTCAGTCAGGTGACCTGAGCAGGGACAGGGTTGATGGGAACTCAGCCATGTGTTCTCAGTTCCTAAACACACAGTCAGCAGCGCAGGGGCCAACGACATGTCCTCCGAGCAGAAGGAGCTCACGCAAACACCTCTGCTCAAGATATGGGTGCCGTGGATGAGCAGTTCCCTAAGCCAGAGGAGAGGCTCTTCACGACCCCAGTTTACAAACTGTCCTACAATGATTGTGATGGTTGGACTGCCGGCCAGGGGAAAGACCTACATCTCCAAAAAGTTAACCCGGTACCTAAATTGGATTGGAGTCCCAACTCAAGTCTTTAATTTGGGTCAGTATCGAAGGGAGGTTGTGCAGACGTACAAGAACTATGAATTTTTTCGTCCGGACAATGAGGAGGCCATGAAAATCCGCAGAGCCTGTGCCTCAAGCGCTCTTAAGGACATCGCCAATTACTTCGATAAGGAGCAGGGACAAGTAGCAGTGTTTGATGCTACCAATACCACAAGGGAGAGAAGAGGGGTCATCATCAGTTTTGCAAAGGAGAAGGGCTACAAGGCAGGTGCAGCAGGGTTTTACGAATTCAACAGCCTGTTTATGAAAGTGTTTTTTATTGAGTCGATTTGTGACGACCCAGAAATCATTGAGGCAAATATAATGCAAGTAAAATTAAGCAGCCCAGATTATGAAAACTACGACAAAGAGGAAGCACTGGTGGACTTTCTGAATCGTATTGATTGTTACAAAATGTCCTATGTCTCCCTGGACGAGGAAAAGGACAGGCACCTCTCCTTCATTAAGATCTTTAACGTGGGATCCAGGTACCTCGTAAACCGGGTCCAGGATCACATTCAGAGTCGTATTGTGTATTACCTCATGAACATCCACGTCACTCCACGATCCATCTATCTGAGCCGCCATGGAGAAAGTGAGCTCAACCTGCTGGGACGAATCGGTGGAGACTCAGGCCTCTCCTCACAGGGCCAAAAGTATGCTAGGGCACTCTCAGAGTTCATCAGAGGTCAATCCATCAAGGACCTGAAGGTGTGGACCAGCCACATGAGAAGGACCATACAGACAGCAGAGGCACTGGGCGTCCCGTATGAACAGTGGAAGGCATTGAATGAAATCGATGCGGGTGTATGTGAAGAGATGACATACGAGGAGATTCAGGCAACCCATCCAGAGGAGTTTGCCTTAAGAGACCAGGACAAGTACCGCTACCGATATCCAAAGGGTGAATCGTATGAAGACCTGGTGCACCGTCTAGAGCCAGTCATAATGGAGCTTGAGAGACAAGAGAATGTGCTGGTCATCTGCCATCAGGCAGTCATGCGTTGTCTACTGGCCTACTTTCTGGACAAAAGTGCAGATGATCTACCATATCTAAAGTGTCCTCTGCATACTGTTCTCAAACTGACTCCATTAGCTTACGGATGCAAAGTGGAGTCCTTCTATTTGAACATCCAAGCAGTGAACACTCACAGAGACAAACCCACAAATGTGAATGTTGCAAGAAAGCCAGAAGAAGCACTCCGGACTGTACCTGAACATCTATAATCATAAAAAAAAAAAAAAAATCTCAAATTTGCCATCTTTGCACAATTAATCTACACATACTGTATATAGATTGTGTAAATGGATAGCAAGGTGGGAGGAAGAATATAAAAGGGCATAATTATGTGTTTTCATTAAGATTATCAAGACTTACAAACACAGTGTGTTCTAAAAGTCTAAGACTGCATCTGGGAATTTTTTTTTTTATAATTTGTCATTAAATATTTTGTAATAAATTAGAAAATACAGGACATAATTTTTGCATTTTCACTAGTAGTCTTGGACTTTTGAATCCAAATTTTGTTTTTTCCAACTAAACTTTAAAAATCAAGTATTTTGTTGATAAGATCTTGCAACTAAAGAGTGAGAATTACCTTTTCTTACTATAAATGTTTAGTTAGAACAGGTGAAATCCCTATTGTATGAATGAGAATGTAGTGTTTATTTAATTAATTTGGTTGTTTTAATATTGTGTTCAAAGAGCTGGGAATAATGCCCTTTTATACATTCATAAAGTACAGTATTCAGAAGCTTGTTCAGTTACCAGTACCATGGACAGCAACCAAACAA

Function

symbol description
pfkfb1 Predicted to enable 6-phosphofructo-2-kinase activity and fructose-2,6-bisphosphate 2-phosphatase activity. Predicted to be involved in fructose 2,6-bisphosphate metabolic process. Predicted to act upstream of or within fructose metabolic process and phosphorylation. Predicted to be part of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase complex. Predicted to be active in cytosol. Is expressed in neural plate; neural tube; and somite. Orthologous to human PFKFB1 (6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1).

NR:

description
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase

GO:

id name namespace
GO:0016310 phosphorylation biological_process

KEGG:

id description
K19028 PFKFB1; 6-phosphofructo-2-kinase / fructose-2,6-biphosphatase 1

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_09491225_09507444.mRNA True 3023 mRNA 0.41 14 9490227 9508011

Neighbor

gene id symbol gene type direction distance location
CI01000001_09483845_09484834 NA coding upstream 4480 9483845 ~ 9485747 (+)
CI01000001_09477768_09481888 WISP2 coding upstream 8253 9477689 ~ 9481974 (+)
CI01000001_09435836_09436037 NA coding upstream 53854 9435836 ~ 9436373 (+)
CI01000001_09409294_09411908 TTPAL coding upstream 77796 9408019 ~ 9412431 (+)
CI01000001_09400828_09406357 HNF4A coding upstream 83004 9399031 ~ 9407223 (+)
CI01000001_09509892_09522047 NA coding downstream 1881 9509892 ~ 9523081 (+)
CI01000001_09533674_09538902 NA coding downstream 25663 9533674 ~ 9539079 (+)
CI01000001_09582178_09593275 PTPN22 coding downstream 74167 9582178 ~ 9593283 (+)
CI01000001_09782626_09784851 NA coding downstream 274615 9782626 ~ 9785184 (+)
CI01000001_09932205_09934551 NA coding downstream 423144 9931155 ~ 9935172 (+)
G17583 NA non-coding upstream 15444 9474580 ~ 9474783 (+)
G17581 NA non-coding upstream 16298 9473611 ~ 9473929 (+)
CI01000001_09383903_09384322 NA non-coding upstream 105587 9383899 ~ 9384678 (+)
G17566 NA non-coding upstream 108567 9381135 ~ 9381660 (+)
CI01000001_09308544_09311741 NA non-coding upstream 178633 9306701 ~ 9312011 (+)
G17587 NA non-coding downstream 49582 9557593 ~ 9557897 (+)
G17588 NA non-coding downstream 50140 9558151 ~ 9558420 (+)
G17594 NA non-coding downstream 59892 9567903 ~ 9568225 (+)
G17601 NA non-coding downstream 67620 9575631 ~ 9575901 (+)
G17602 NA non-coding downstream 68460 9576471 ~ 9576785 (+)
G17354 NA other upstream 249550 9234463 ~ 9240677 (+)
G17353 NA other upstream 261368 9216022 ~ 9228859 (+)
G17234 NA other upstream 1457744 8032124 ~ 8032483 (+)
CI01000001_07531945_07539781 NA other upstream 1949641 7531541 ~ 7540586 (+)
G18896 NA other downstream 731889 10239900 ~ 10241492 (+)
G18873 NA other downstream 749101 10223879 ~ 10260714 (+)
G18872 NA other downstream 763135 10271146 ~ 10281369 (+)
CI01000001_10395420_10396473 NA other downstream 885546 10394851 ~ 10396705 (+)
G18937 NA other downstream 966973 10474984 ~ 10476389 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_021716 pfkfb1 coding NC_007134.7 CM002907.2 26017227 ~ 26037969 (+)