G17602


Basic Information

Item Value
gene id G17602
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 9576471 ~ 9576785 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU19733
AACAATGCTTAGGTAGGTGGTACATGTCAAAATAACATCCACATGGATGGCAGGACCCAAGGTTTGACAGCAGAACATTGCCCAAAGCATCACACTGCCTCCGCCAGCTTGCCTTCTTCCCATAGTGCATCCTGGTGCCATGTGTTACCCAGGTAAGCGACGCACACACACCCGGCCATCCACGTGATGTAAAAGAAAACGTGATTCATCAGACCAGGCCACCTTCTTTCATTGCTCCGTGGTCCAGTTCTGATGCTCACGTGCTCACTGTTGCCGCTTTCAGCGGTGGACAGGGGTCAGCATGGGCACCCTGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU19733 True 315 lncRNA 0.53 1 9576471 9576785

Neighbor

gene id symbol gene type direction distance location
CI01000001_09533674_09538902 NA coding upstream 37392 9533674 ~ 9539079 (+)
CI01000001_09509892_09522047 NA coding upstream 53390 9509892 ~ 9523081 (+)
CI01000001_09491225_09507444 PFKFB1 coding upstream 68460 9490227 ~ 9508011 (+)
CI01000001_09483845_09484834 NA coding upstream 90724 9483845 ~ 9485747 (+)
CI01000001_09477768_09481888 WISP2 coding upstream 94497 9477689 ~ 9481974 (+)
CI01000001_09582178_09593275 PTPN22 coding downstream 5393 9582178 ~ 9593283 (+)
CI01000001_09782626_09784851 NA coding downstream 205841 9782626 ~ 9785184 (+)
CI01000001_09932205_09934551 NA coding downstream 354370 9931155 ~ 9935172 (+)
CI01000001_09946111_09958162 NA coding downstream 367335 9944120 ~ 9958246 (+)
CI01000001_10072627_10081119 CACNB3, CACNB3A, CACNB3B coding downstream 495842 10072627 ~ 10081179 (+)
G17601 NA non-coding upstream 570 9575631 ~ 9575901 (+)
G17594 NA non-coding upstream 8246 9567903 ~ 9568225 (+)
G17588 NA non-coding upstream 18051 9558151 ~ 9558420 (+)
G17587 NA non-coding upstream 18574 9557593 ~ 9557897 (+)
G17583 NA non-coding upstream 101688 9474580 ~ 9474783 (+)
G17675 NA non-coding downstream 187126 9763911 ~ 9836841 (+)
G17673 NA non-coding downstream 209251 9786036 ~ 9825059 (+)
G17674 NA non-coding downstream 214155 9790940 ~ 9803333 (+)
G17694 NA non-coding downstream 227889 9804674 ~ 9805379 (+)
G17709 NA non-coding downstream 278690 9855475 ~ 9863074 (+)
CI01000001_09435836_09436037 NA other upstream 138408 9435836 ~ 9436373 (+)
G17354 NA other upstream 335794 9234463 ~ 9240677 (+)
G17353 NA other upstream 347612 9216022 ~ 9228859 (+)
G17234 NA other upstream 1543988 8032124 ~ 8032483 (+)
CI01000001_07531945_07539781 NA other upstream 2035885 7531541 ~ 7540586 (+)
G18896 NA other downstream 663115 10239900 ~ 10241492 (+)
G18873 NA other downstream 680327 10223879 ~ 10260714 (+)
G18872 NA other downstream 694361 10271146 ~ 10281369 (+)
CI01000001_10395420_10396473 NA other downstream 816772 10394851 ~ 10396705 (+)
G18937 NA other downstream 898199 10474984 ~ 10476389 (+)

Expression


Co-expression Network