CI01000001_09477768_09481888 (WISP2)


Basic Information

Item Value
gene id CI01000001_09477768_09481888
gene name WISP2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 9477689 ~ 9481974 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_09477768_09481888.mRNA
TTATAAAAGTGCATGTGCACAGAGCCAGGCAGTGAGCAAACAGTAACACAAGTAGAAAATCTTATTGTGGAAGAGCATGATGGACAAGATACAGAGAGACAGAAACATCCTGATGGCATGGGCATTGCTGTTTTACCTAGGCTCACAGGTGTGCTGTCAGCAATGTGGAGGCCCTTGTCAGTGCCAAGGCTCTGTACCAGTCTGCCCAGAAGGAGTTCCTCTCATTCTCGATGGGTGCCAGTGCTGCCAGGTGTGTGCCCGGCAGCAGGGCGAGGCCTGCAGTGAGGTGTTTCCATGTGACAGTCAGCGCGGGCTGCAATGTGACTACAGTGCCAGCTTCCCTGGTGACCCAGGAGAGTGTGTCAGCCAGAAGGAGCTGGGCTGTGAGCATAATGGAGTCTCTTACCAGGAAGGCCAGGTATTCCAGCCCTCTTGTGCTCTTCAGTGCCGTTGTTCGGGCGGAGGGGTGACCTGTGTGCCCCGGTGCAGTGAGGATGTTCTCCTGCCCACCCCAGACTGCCCTCATCCTCGTAGGGTTCAGCAACCAGGAAAATGCTGTAAAGAGTGGGTGTGTGAAAATATGGACAACACAGTGCTTCAGGACGCTCATATAGCTTCCAGAAGTGACCAGACATTGCCTGCAGATCCTGGATACCAAACCAGACCCGGCTCAAACTGCATAGACCAGAGCTCCGAGTGGAGTGCTTGTTCGCTGACCTGCGGGTCTGGAATATCCACACGGGTGTCCAATCAAAACCCATCCTGTCGCTTGGAGATGCAGATCCGCTTGTGTATGATCCGACCCTGTCAGCCTGTTCTCCATAGAACCCCACAGTGGTCAAGGAGGAAATGTCAACCCAGTTACAGGTCAGCAACCCCAGTTCGGCTTTTCCACCAGGGCTGCTATAGTACACAGTTCTATAGGCCTCGTTATTGTGGCTCATGTACAGACAGCCGTTGCTGCACTCCTTACCATACTGGCACGGCACTGGTCACTTTCCGCTGCCCTGGGGGAAGACTGCTCAGTCATGCTGTCATGATCATCAACTCCTGCATCTGTCATTACAACTGCCCCTATTCATCTGTAGGGGCATATAGAGGGACACCCTTCCTGGGTTAGACACTCACTCTCTTGCAGGCTGACTTTGGATCTAGTAGCTTCACATTGGATGCTCTGGGTTTACATGTCTTATTGAGTGTTAGTTA

Function

symbol description
wisp2 CCN family member 5

GO:

id name namespace
GO:0005178 integrin binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_09477768_09481888.mRNA True 1206 mRNA 0.53 5 9477689 9481974

Neighbor

gene id symbol gene type direction distance location
CI01000001_09435836_09436037 NA coding upstream 41316 9435836 ~ 9436373 (+)
CI01000001_09409294_09411908 TTPAL coding upstream 65258 9408019 ~ 9412431 (+)
CI01000001_09400828_09406357 HNF4A coding upstream 70466 9399031 ~ 9407223 (+)
CI01000001_09383903_09384322 NA coding upstream 93011 9383899 ~ 9384678 (+)
CI01000001_09334528_09350703 RBMS2B coding upstream 126326 9334528 ~ 9351363 (+)
CI01000001_09483845_09484834 NA coding downstream 1871 9483845 ~ 9485747 (+)
CI01000001_09491225_09507444 PFKFB1 coding downstream 8253 9490227 ~ 9508011 (+)
CI01000001_09509892_09522047 NA coding downstream 27918 9509892 ~ 9523081 (+)
CI01000001_09533674_09538902 NA coding downstream 51700 9533674 ~ 9539079 (+)
CI01000001_09582178_09593275 PTPN22 coding downstream 100204 9582178 ~ 9593283 (+)
G17583 NA non-coding upstream 2906 9474580 ~ 9474783 (+)
G17581 NA non-coding upstream 3760 9473611 ~ 9473929 (+)
G17566 NA non-coding upstream 96029 9381135 ~ 9381660 (+)
CI01000001_09308544_09311741 NA non-coding upstream 166095 9306701 ~ 9312011 (+)
G17587 NA non-coding downstream 75619 9557593 ~ 9557897 (+)
G17588 NA non-coding downstream 76177 9558151 ~ 9558420 (+)
G17594 NA non-coding downstream 85929 9567903 ~ 9568225 (+)
G17601 NA non-coding downstream 93657 9575631 ~ 9575901 (+)
G17602 NA non-coding downstream 94497 9576471 ~ 9576785 (+)
G17354 NA other upstream 237012 9234463 ~ 9240677 (+)
G17353 NA other upstream 248830 9216022 ~ 9228859 (+)
G17234 NA other upstream 1445206 8032124 ~ 8032483 (+)
CI01000001_07531945_07539781 NA other upstream 1937103 7531541 ~ 7540586 (+)
G18896 NA other downstream 757926 10239900 ~ 10241492 (+)
G18873 NA other downstream 775138 10223879 ~ 10260714 (+)
G18872 NA other downstream 789172 10271146 ~ 10281369 (+)
CI01000001_10395420_10396473 NA other downstream 911583 10394851 ~ 10396705 (+)
G18937 NA other downstream 993010 10474984 ~ 10476389 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location