G17588


Basic Information

Item Value
gene id G17588
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 9558151 ~ 9558420 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU19716
GAAAATAGTTATACTACACAATTATTCACTAACATAGGTTATTTGTCAAATTCGATGCATATTGTACGCATTATAGTTCTTGTTAAATAAACAAAATCACTGGTAAAAAAACACCTTAGTATTGATATTTTTTATTTGAGTATCGATACTTTCGATACTCAGAATCGATACGCCCATCCCTATAAACCAGTATCATTGTTTAAGAAGCAGAGAAAGAGTCAGAGTGCTTCCTTTATTGTACTTGCAGATACAACTCACAGTGTGACTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU19716 True 270 lncRNA 0.38 1 9558151 9558420

Neighbor

gene id symbol gene type direction distance location
CI01000001_09533674_09538902 NA coding upstream 19072 9533674 ~ 9539079 (+)
CI01000001_09509892_09522047 NA coding upstream 35070 9509892 ~ 9523081 (+)
CI01000001_09491225_09507444 PFKFB1 coding upstream 50140 9490227 ~ 9508011 (+)
CI01000001_09483845_09484834 NA coding upstream 72404 9483845 ~ 9485747 (+)
CI01000001_09477768_09481888 WISP2 coding upstream 76177 9477689 ~ 9481974 (+)
CI01000001_09582178_09593275 PTPN22 coding downstream 23758 9582178 ~ 9593283 (+)
CI01000001_09782626_09784851 NA coding downstream 224206 9782626 ~ 9785184 (+)
CI01000001_09932205_09934551 NA coding downstream 372735 9931155 ~ 9935172 (+)
CI01000001_09946111_09958162 NA coding downstream 385700 9944120 ~ 9958246 (+)
CI01000001_10072627_10081119 CACNB3, CACNB3A, CACNB3B coding downstream 514207 10072627 ~ 10081179 (+)
G17587 NA non-coding upstream 254 9557593 ~ 9557897 (+)
G17583 NA non-coding upstream 83368 9474580 ~ 9474783 (+)
G17581 NA non-coding upstream 84222 9473611 ~ 9473929 (+)
CI01000001_09383903_09384322 NA non-coding upstream 173511 9383899 ~ 9384678 (+)
G17566 NA non-coding upstream 176491 9381135 ~ 9381660 (+)
G17594 NA non-coding downstream 9483 9567903 ~ 9568225 (+)
G17601 NA non-coding downstream 17211 9575631 ~ 9575901 (+)
G17602 NA non-coding downstream 18051 9576471 ~ 9576785 (+)
G17675 NA non-coding downstream 205491 9763911 ~ 9836841 (+)
G17673 NA non-coding downstream 227616 9786036 ~ 9825059 (+)
CI01000001_09435836_09436037 NA other upstream 120088 9435836 ~ 9436373 (+)
G17354 NA other upstream 317474 9234463 ~ 9240677 (+)
G17353 NA other upstream 329292 9216022 ~ 9228859 (+)
G17234 NA other upstream 1525668 8032124 ~ 8032483 (+)
CI01000001_07531945_07539781 NA other upstream 2017565 7531541 ~ 7540586 (+)
G18896 NA other downstream 681480 10239900 ~ 10241492 (+)
G18873 NA other downstream 698692 10223879 ~ 10260714 (+)
G18872 NA other downstream 712726 10271146 ~ 10281369 (+)
CI01000001_10395420_10396473 NA other downstream 835137 10394851 ~ 10396705 (+)
G18937 NA other downstream 916564 10474984 ~ 10476389 (+)

Expression


Co-expression Network