CI01000001_09533674_09538902


Basic Information

Item Value
gene id CI01000001_09533674_09538902
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 9533674 ~ 9539079 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_09533674_09538902.mRNA
CTACAGTATGCCACATCTGGCTCAACCAGCAGCTGGTCAGGCTGTGTCTGGTGGACAGCTGGTGTCTTATCTGAAATCTGCCTTGTCCACTGCTCCTCACAATGTACTGCTCTTCTTACAGGATAAGCTAAGTATAGATGACTTCACCATGTACGGTGGAGTGTTTGGGAACAAGCAAGACAGTGTCTTTTTAAACGTAGAGTCAGCACTTCAGTCGTCATCCAGTCCTCTGGTGTTGCCAGCCCTGGACTGGTCTGCATCAGATTCAGTCCTGGAACTCTTCCAGGAAGAGCTGGGTATCCCAGCGGTTCACATCAACCCAAGCACCCTAAAGGAAATCAAGCTGAACACCGCACAGCCTTCGCTGCTGGCTGTCCATCTCCCTTACACAGCTGGATCTCAGGACGTGCCTTACACTGCTGTATACACCGGCCTCAAGCCCTCTAGAGTCATTGAAGATACTCCAGTAATGGCAGGAAGTTCTGTGGGCCGATCGCTACTTCAGGCACCAACAAGTCCACCTGTGAAACCCCCAGTTGTCTTCAGCAACAGCACAGGGCAACCCTGTATCATGATGTGGGCTGACCGTCTCCTCGCCAGCTACTCTAATAACGAAGTTGATTTGGGAATATACATTTTTAATGGTTCTGCTACCACGACTGGTTCAGTTTGCAGTGAAACACTGTCAAGACTTGTCCTGAATTTCCAAAACGTTCTGGGTTTTCAATCCCTTCAGCTTATCTTCTCTATGCACAAGATCTTCTTTCCTGTGTCTGCTCGCTACTGGACCGTCATGGAGCAAGTTGTGCTGGAGTATGACGGGCAGAGGGCGACCTTTAATGGCAGTAGGGGTATCTATACTCCTGCAGAGTATTCTTTCCATTGCCAGAACGTAAACAGTGTTCAGAGCCCACTGCTGGTGCCTTACAATGCTACCGACAACGCTACCCAATGGAAGCTGACCTTCACTGATTTTCAGATCCAAGGCTTCAACCTTACTGGTGAAATGTTCTCATATGCCAGCGATTGTGCAGGGTTCTTCACTCCGGGGATTTGGATGGGGCTGCTGACTTCTCTGCTCATGGTGCTCATTCTTACTTACGGCCTGCACATGATCATGCAGCTTCGCACAATGGACCGCTTTGACGATCCAAAAGGCCCAGCGATTTCAGTGCCTCAGAGTGAGTGAATGAGCCAGAGAGAGAAAAAAAAAAGAAACACCTGTGATGTTGTCAAACTGTAAAAATATACTATGTATGTCAAAAACATCCAGCCCTTAATGTGGGTGTCAATCAGGAATTTCCGGATTTGAATGTTTTTAAGAGTAAGTATAATATATTCAGAGGCAAAAAAAGTTTTTTTCCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_09533674_09538902.mRNA True 1366 mRNA 0.47 8 9533674 9539079

Neighbor

gene id symbol gene type direction distance location
CI01000001_09509892_09522047 NA coding upstream 10593 9509892 ~ 9523081 (+)
CI01000001_09491225_09507444 PFKFB1 coding upstream 25663 9490227 ~ 9508011 (+)
CI01000001_09483845_09484834 NA coding upstream 47927 9483845 ~ 9485747 (+)
CI01000001_09477768_09481888 WISP2 coding upstream 51700 9477689 ~ 9481974 (+)
CI01000001_09435836_09436037 NA coding upstream 97301 9435836 ~ 9436373 (+)
CI01000001_09582178_09593275 PTPN22 coding downstream 43099 9582178 ~ 9593283 (+)
CI01000001_09782626_09784851 NA coding downstream 243547 9782626 ~ 9785184 (+)
CI01000001_09932205_09934551 NA coding downstream 392076 9931155 ~ 9935172 (+)
CI01000001_09946111_09958162 NA coding downstream 405041 9944120 ~ 9958246 (+)
CI01000001_10072627_10081119 CACNB3, CACNB3A, CACNB3B coding downstream 533548 10072627 ~ 10081179 (+)
G17583 NA non-coding upstream 58891 9474580 ~ 9474783 (+)
G17581 NA non-coding upstream 59745 9473611 ~ 9473929 (+)
CI01000001_09383903_09384322 NA non-coding upstream 149034 9383899 ~ 9384678 (+)
G17566 NA non-coding upstream 152014 9381135 ~ 9381660 (+)
CI01000001_09308544_09311741 NA non-coding upstream 222080 9306701 ~ 9312011 (+)
G17587 NA non-coding downstream 18514 9557593 ~ 9557897 (+)
G17588 NA non-coding downstream 19072 9558151 ~ 9558420 (+)
G17594 NA non-coding downstream 28824 9567903 ~ 9568225 (+)
G17601 NA non-coding downstream 36552 9575631 ~ 9575901 (+)
G17602 NA non-coding downstream 37392 9576471 ~ 9576785 (+)
G17354 NA other upstream 292997 9234463 ~ 9240677 (+)
G17353 NA other upstream 304815 9216022 ~ 9228859 (+)
G17234 NA other upstream 1501191 8032124 ~ 8032483 (+)
CI01000001_07531945_07539781 NA other upstream 1993088 7531541 ~ 7540586 (+)
G18896 NA other downstream 700821 10239900 ~ 10241492 (+)
G18873 NA other downstream 718033 10223879 ~ 10260714 (+)
G18872 NA other downstream 732067 10271146 ~ 10281369 (+)
CI01000001_10395420_10396473 NA other downstream 854478 10394851 ~ 10396705 (+)
G18937 NA other downstream 935905 10474984 ~ 10476389 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_021718 atp6ap1b coding NC_007134.7 CM002907.2 26079467 ~ 26094178 (+)