Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000001_09477768_09481888.mRNA |
| length | 1206 |
| RNA type | mRNA |
| GC content | 0.53 |
| exon number | 5 |
| gene id | CI01000001_09477768_09481888 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000001 |
| NCBI id | null |
| chromosome length | 13537560 |
| location | 9477689 ~ 9481974 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0005178 | integrin binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU19711 | lncRNA | upstream | 2906 | 9474580 ~ 9474783 (+) | True | G17583 |
| TU19709 | lncRNA | upstream | 3760 | 9473611 ~ 9473929 (+) | True | G17581 |
| TU19514 | lncRNA | upstream | 93049 | 9383899 ~ 9384640 (+) | True | CI01000001_09383903_09384322 |
| TU19694 | lncRNA | upstream | 96029 | 9381135 ~ 9381660 (+) | True | G17566 |
| TU19474 | lncRNA | upstream | 166095 | 9264516 ~ 9291390 (+) | True | G17349 |
| TU19715 | lncRNA | downstream | 75619 | 9557593 ~ 9557897 (+) | True | G17587 |
| TU19716 | lncRNA | downstream | 76177 | 9558151 ~ 9558420 (+) | True | G17588 |
| TU19722 | lncRNA | downstream | 85929 | 9567903 ~ 9568225 (+) | True | G17594 |
| TU19732 | lncRNA | downstream | 93657 | 9575631 ~ 9575901 (+) | True | G17601 |
| TU19733 | lncRNA | downstream | 94497 | 9576471 ~ 9576785 (+) | True | G17602 |
| CI01000001_09435836_09436037.mRNA | mRNA | upstream | 41316 | 9435836 ~ 9436373 (+) | False | CI01000001_09435836_09436037 |
| CI01000001_09409294_09411908.mRNA | mRNA | upstream | 65258 | 9408019 ~ 9412431 (+) | True | CI01000001_09409294_09411908 |
| CI01000001_09400828_09406357.mRNA | mRNA | upstream | 70466 | 9399031 ~ 9407223 (+) | True | CI01000001_09400828_09406357 |
| CI01000001_09383903_09384322.mRNA | mRNA | upstream | 93011 | 9383903 ~ 9384678 (+) | False | CI01000001_09383903_09384322 |
| CI01000001_09334528_09350703.mRNA | mRNA | upstream | 126326 | 9334528 ~ 9351363 (+) | True | CI01000001_09334528_09350703 |
| CI01000001_09483845_09484834.mRNA | mRNA | downstream | 1871 | 9483845 ~ 9485747 (+) | True | CI01000001_09483845_09484834 |
| CI01000001_09491225_09507444.mRNA | mRNA | downstream | 8253 | 9490227 ~ 9508011 (+) | True | CI01000001_09491225_09507444 |
| CI01000001_09509892_09522047.mRNA | mRNA | downstream | 27918 | 9509892 ~ 9523081 (+) | True | CI01000001_09509892_09522047 |
| CI01000001_09533674_09538902.mRNA | mRNA | downstream | 51700 | 9533674 ~ 9539079 (+) | True | CI01000001_09533674_09538902 |
| CI01000001_09582178_09593275.mRNA | mRNA | downstream | 100204 | 9582178 ~ 9593283 (+) | True | CI01000001_09582178_09593275 |
| TU19459 | other | upstream | 39626 | 9418328 ~ 9438063 (+) | True | G17334 |
| TU19479 | other | upstream | 237012 | 9234463 ~ 9240677 (+) | True | G17354 |
| TU19478 | other | upstream | 248830 | 9216022 ~ 9228859 (+) | True | G17353 |
| TU19348 | other | upstream | 1445206 | 8032124 ~ 8032483 (+) | True | G17234 |
| TU19037 | other | upstream | 1937103 | 7532640 ~ 7540586 (+) | False | CI01000001_07531945_07539781 |
| TU21219 | other | downstream | 757926 | 10239900 ~ 10241492 (+) | True | G18896 |
| TU21190 | other | downstream | 775138 | 10257112 ~ 10260714 (+) | True | G18873 |
| TU21188 | other | downstream | 789172 | 10271146 ~ 10281369 (+) | True | G18872 |
| TU21193 | other | downstream | 911583 | 10393557 ~ 10395953 (+) | True | G18875 |
| TU21268 | other | downstream | 993010 | 10474984 ~ 10476389 (+) | True | G18937 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00043097 | False | 1406 | mRNA | 0.52 | 5 | NC_007134.7 | 25993686 ~ 26003858 (+) |
