pvalb6 (LOC107585030,LOC107662370,LOC107690741,LOC107602319,LOC107710050,LOC108258409,LOC108412390)


Basic Information

Item Value
gene id pvalb6
gene name LOC107585030,LOC107662370,LOC107690741,LOC107602319,LOC107710050,LOC108258409,LOC108412390
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 23262991 ~ 23300757 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043235617.1
acactctctctctccccttcaTCTCACCTCCAACTAGTCAGTGTTCTGTCTCTGTcctgctctgtctctctccttttccctctctgtctatctctctctctctctctctctctctctctctctttggtgTGCTCAAGCTCCAGtttgctgtctgtctgtgcgtTGCCGGTCTCGTTCCTCTGCAGACCTGAACCTCCAGCTGAACCTGGGACTCCAGCTCACTCTCCAACGGTTGTAGAAATGGCCATGAACAGCATCCTCAACCCTGATGACATCAAGAAAGCCCTGGACGCCTTTCAAGccGCCGACTCATTTGACCCCAAGAGGTTTTTTGAGATGGTCGGACTAAAGGCAAAGTCGGCTGAAGATGTGAAGAAGGCCTTCCACGTCCTGGATGCAGACAACAGCGGCTTTATAGAGGAGGAGGAACTAAAgtTTGTTTTCAAGCATTTCGCTACAAACGGGAGAGACCTGAGCGATAAGGAGACCAAAGCATTCCTGCAGGCTGCGGACAAAGATGGAGATGGAAAGATTGGAGCAGAAGAGTTTGCTGCTCTGGTTCGTGAATAAGTGACTCTGACTCTTGGCCTGTTCATACCTCATGACCCTTTGACCTCGACCTCAGCCTAACCTCCCTgaagcacagacacacacacacgctcacacacacacacacacactcgcacgccCCCCTTGAACACCTCCCtgcacacaatcacacacactgaccttcATGCTatctattttcctttttatacaAAAGTGAGTGTTTCTGCTAGTGTATAGACCAAGAGACCTTCAACAGGGCAAAACCTCATGCCGGCAATATGTAGATATAATAGAAAAGTAAACATAGCACCGTTCATCGGCCACTATTCTTCATCCGTCTTTATCTTCCTCGAATCTCTCCTATTGATCTTCCGCTCCTCTCCTCCCCTCAAAACTCTCTCCGTCCCTCCGTTAACAAGCCGTTGTGAAACACACCAAAAGAAGAAAGAGGTCAAGttgtgaaagaaaacaaaataaagacaaaatgcCTCAAGA

Function

NR:

description
PREDICTED: parvalbumin-7-like

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
K23926 PVALB; parvalbumin alpha

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043235617.1 True 1044 mRNA 0.48 5 23262991 23300757

Neighbor

gene id symbol gene type direction distance location
pdgfbb LOC107710051,LOC107582898,LOC107740670,LOC107656789,LOC107585031,LOC107662372 coding upstream 30691 23221703 ~ 23232300 (+)
tmem150b tmem150b,LOC107662375 coding upstream 65897 23193030 ~ 23197094 (+)
LOC122341904 adsl coding upstream 70102 23184848 ~ 23192889 (+)
LOC122341905 adsl coding upstream 81925 23171604 ~ 23181066 (+)
atf4b atf4b,LOC107585034,LOC107740611,LOC107710053,LOC107662376,LOC107656792,LOC107582897 coding upstream 95747 23164362 ~ 23167244 (+)
LOC122341903 LOC107740604,LOC107662367,LOC107585029,LOC107710048,LOC107602318,LOC107690738 coding downstream 10079 23310836 ~ 23319832 (+)
LOC122341901 LOC107740603,LOC107662366,LOC107690737,LOC107602322,LOC107585068 coding downstream 25840 23326597 ~ 23336485 (+)
LOC122341358 LOC107585025,LOC107716530,LOC107662363 coding downstream 71903 23372660 ~ 23392187 (+)
LOC122341912 LOC107695123 coding downstream 97002 23397759 ~ 23400922 (+)
si:dkey-68o6.8 NA coding downstream 109862 23410619 ~ 23412806 (+)
G22582 LOC107687786,LOC107710056,LOC107662412,LOC107740652,LOC107585075,LOC107582935,LOC105912825,LOC103364773 non-coding upstream 114373 23100944 ~ 23148618 (+)
G22584 NA non-coding upstream 146151 23114278 ~ 23116840 (+)
G22581 LOC107740652,LOC107662412,LOC107582935,LOC107687786,LOC107710056,LOC107578312,LOC107577241 non-coding upstream 167569 23089473 ~ 23095422 (+)
G22554 ddx5,LOC107695114 non-coding upstream 234486 22940247 ~ 23028505 (+)
G22340 atp5g1,LOC107740625,LOC107662391,LOC107582887,LOC107585044 non-coding upstream 590080 22511428 ~ 22672911 (+)
LOC122341922 LOC107695122,LOC107583308 non-coding downstream 95744 23396501 ~ 23400922 (+)
LOC122341920 LOC107672134,LOC107602299 non-coding downstream 112056 23412813 ~ 23414909 (+)
G22754 NA non-coding downstream 262283 23563040 ~ 23563246 (+)
G22757 NA non-coding downstream 274141 23574898 ~ 23578241 (+)
G22758 NA non-coding downstream 277719 23578476 ~ 23646166 (+)
prr15la prr15la,LOC107710040,LOC107585086,LOC107662431,LOC107582938,LOC108412372 other upstream 99275 23158219 ~ 23163716 (+)
LOC122341356 il2rb,LOC107695139,LOC107583317 other upstream 354856 22899333 ~ 22908135 (+)
hoxb2a hoxb2,hoxb2a,LOC107585087,LOC107662381,LOC107582889,LOC107687781 other upstream 492389 22765647 ~ 22770602 (+)
hoxb5a hoxb5a,LOC107717200,LOC107662384,LOC107687777,LOC108413114,LOC107740619 other upstream 536833 22722022 ~ 22726158 (+)
G22329 LOC107585049,LOC107740630,LOC107662396,LOC107582928,LOC107717208 other upstream 715783 22546158 ~ 22547208 (+)
dnal4a dnal4a,dnal4,LOC107662365,LOC107585028,LOC107690743,LOC107740666,LOC107710037 other downstream 37622 23338379 ~ 23343640 (+)
LOC122341898 LOC107662363 other downstream 43207 23343964 ~ 23361942 (+)
LOC122341907 NA other downstream 102684 23403441 ~ 23408814 (+)
zmp:0000000912 LOC107748810,LOC107695116,LOC107583322,LOC107695109,LOC107583307,LOC107709636,LOC107672113,LOC107602301 other downstream 123864 23424621 ~ 23431766 (+)
c1qtnf6a c1qtnf6,c1qtnf6a,mgat3a,LOC107695119,LOC107723613,LOC107672153,LOC107583300,LOC107748818,LOC107580620,LOC107695120 other downstream 408746 23709503 ~ 23721719 (+)

Expression


Co-expression Network