G19087


Basic Information

Item Value
gene id G19087
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 10873982 ~ 10874233 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU21430
TGATTGTGGACTGGATATTTTTTTACCTTTTATCACAGTCTTGGACATGTGAAAGATTAGTAACAACATTGGCTTTGATGCATTGTTAGTTTTTGTGCAGCATCAGATTTTAATTTTTTCTCCCTCATTTACTGTTCGTGGCTGTTTTTGCCCCATTGACTTCCATTATAACGACATTTTTTGATTGCAAAGCCATGACACCATATAATCAAGCATTCTTGATTGTTGGTGGTTTTCCCTGTTGGGAAGAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21430 True 252 lncRNA 0.36 1 10873982 10874233

Neighbor

gene id symbol gene type direction distance location
CI01000001_10856786_10861403 C1GALT1A coding upstream 11844 10855960 ~ 10862138 (+)
CI01000001_10807407_10818870 SLC26A10 coding upstream 53929 10807320 ~ 10820053 (+)
CI01000001_10749174_10779222 ARHGEF25A coding upstream 94528 10749174 ~ 10779454 (+)
CI01000001_10715529_10716091 NA coding upstream 157072 10715114 ~ 10716910 (+)
CI01000001_10694664_10713151 NA coding upstream 159298 10694467 ~ 10714684 (+)
CI01000001_10968536_10981345 NA coding downstream 94111 10968344 ~ 10981787 (+)
CI01000001_10989337_10992917 BIRC5B coding downstream 115104 10989337 ~ 10992978 (+)
CI01000001_11019871_11028065 MYL6, MYL6B coding downstream 145246 11019479 ~ 11028524 (+)
CI01000001_11099313_11137500 HUWE1 coding downstream 225080 11099313 ~ 11138278 (+)
CI01000001_11138617_11139541 NA coding downstream 264052 11138285 ~ 11139673 (+)
G19080 NA non-coding upstream 58280 10814390 ~ 10815702 (+)
G18998 NA non-coding upstream 216711 10655387 ~ 10657271 (+)
G19041 NA non-coding upstream 219060 10654569 ~ 10654922 (+)
G18997 NA non-coding upstream 274731 10599026 ~ 10599251 (+)
G19008 NA non-coding upstream 275168 10598604 ~ 10598814 (+)
G19088 NA non-coding downstream 437 10874670 ~ 10874871 (+)
G19034 NA non-coding downstream 18204 10892437 ~ 10896905 (+)
G19130 NA non-coding downstream 51295 10925528 ~ 10986466 (+)
G19121 NA non-coding downstream 196671 11070904 ~ 11126159 (+)
G19226 NA non-coding downstream 295060 11169293 ~ 11183770 (+)
G19039 NA other upstream 19999 10850924 ~ 10853983 (+)
CI01000001_10538498_10539667 RPS26 other upstream 334136 10538388 ~ 10539846 (+)
G18937 NA other upstream 397593 10474984 ~ 10476389 (+)
CI01000001_10395420_10396473 NA other upstream 477277 10394851 ~ 10396705 (+)
G18872 NA other upstream 592613 10271146 ~ 10281369 (+)
G19314 NA other downstream 626961 11501194 ~ 11558673 (+)
G19395 NA other downstream 807089 11681322 ~ 11681817 (+)
CI01000001_13514115_13517063 NA other downstream 2639171 13514115 ~ 13517063 (+)

Expression


Co-expression Network