CI01000001_11019871_11028065 (MYL6, MYL6B)


Basic Information

Item Value
gene id CI01000001_11019871_11028065
gene name MYL6, MYL6B
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 11019479 ~ 11028524 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_11019871_11028065.mRNA
CTATAAATAACCATAGCTAACAGATCTAGCTCTTACAAACACACACACACTCACAGAGGTCTTGATGCAAATTAGAAATGAGATTCTTTTATACTGATACTGCTGTCTATCATTGACACAAACACCCTAACACCCACATATGTACACGATTCTGACCTACATATAAATACAAGCGGAGAGAGTGAAACAGATTCGGTGAGACAGCACTCCTACGCACACTCTCTTCCACTGCATGCACATCCACTGCATGAATTCCTCCTAGATCATTCCTGATACCTTCCTGCTTTTCCGATTCTTTCTCTTCTCATTTTCTACTATCAGAGGACACACATGCAATTCATCTGACAGATTTTTCCTTGACAGGGAGGACGGACACATAACAAGGTCTAGCGATGGCACCAAAACGAGAACCGTCAATTAAAAAATCTCCATCTGGGGGAACCTTACCAAGGCATGGACCACCATTTCCTTGCCCTACCACAACACCCTCACCCCCGAAACCAGCTCCTGAGTTGAAACCGCGGATGCTGCGCCCCTCTGACTCCCCCTTTGACCCCAGCACATTAGAGATTGAGTTTAACTTGGAGCAAATACACGAATTCAAAGAAGCCTTCCTCTTGTTTGACCGGACGGGAGATGGAAAGATCACCTACAGTCAGTGCGGGGATGTGATGCGCGCGCTGGGCCAGAATCCCGTCAATGCTGAGGTGCTCAAGGTCCTGGGCAACCCAAAGGCAGAAGAAATGAATCATAAACTGCTGGACTTCGAGCAGTTCCTGCCCATGCTTCAGGCCATTGCTAAGAACAAAGACCAGGGCACATTTGAGGACTTTGTGGAGGGGCTTAGAGTATTTGACAAGGAAGGCAACGGCACGGTCATGGGTGCTGAGCTCCGCCATGTTCTCACCACACTGGGAGAAAAGATGACCGAAGAGGAGGTAGAAACACTTCTAGCCGGACACGAAGATGCTAATGGTTGCATCAATTACGAAGCAGCCTTTTCTCTGGCCCCTGGCTGCAGCATGCTCTCTGCATGTGGCCGTCCCTGCGACGGCTCTCAGAGGCGAAAGGGCGACTGCGCTGCTTCAGACCTGAGCACAGAACGAGTACAACTGGGGAACGGCTTCAAACTACAGCAAACATGGCAGGCCAAAAGCAATTTTTGAAGGGTCTATGTGGCTAGGTTTTTAAAAATATTTTTAGAAATGTAACTTTTAGAACAGCATTTTTTTTCATATGCTGCATGCTGTAGTTGGGGTCGATCCCCTTTTTGCTGCAAATTGGACACTAACTTTTGTTTTATTTCTTTTTTTCTTTTCACAGAACTCGTCCGCATGGTCATGAGCGGTTGAAGATAAAGACCACAACTCATTTGTTTGTCTTATTTTCTGTGTAATAATTTCTTTATGTATTTTGTTTTTCTTCCTATTCATTCCGTCACCTTAATTTGCTTAATTGCTTCAGTCTCTCTCTTGTGTTTGCACTCATTTGGGTATTTTTATTAGAAGTGCCTTTATCTTCTTTAAGTTCCCATTTGACTCCCCAAGAGATACACCTCCTGTCCTGTGGTATTCAAACCATATAACGATATGAAAAAGATCTCTTGTGTGCTGACACGGTCTGCA

Function

symbol description
myl6 Predicted to enable calcium ion binding activity. Orthologous to several human genes including MYL6 (myosin light chain 6).
myl6b Predicted to enable cytoskeletal motor activity. Predicted to be a structural constituent of muscle. Predicted to be involved in muscle filament sliding and skeletal muscle tissue development. Located in extracellular exosome.

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
K12751 MYL6; myosin light chain 6

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_11019871_11028065.mRNA True 1625 mRNA 0.45 7 11019479 11028524

Neighbor

gene id symbol gene type direction distance location
CI01000001_10989337_10992917 BIRC5B coding upstream 26501 10989337 ~ 10992978 (+)
CI01000001_10968536_10981345 NA coding upstream 37692 10968344 ~ 10981787 (+)
CI01000001_10856786_10861403 C1GALT1A coding upstream 157341 10855960 ~ 10862138 (+)
CI01000001_10807407_10818870 SLC26A10 coding upstream 199426 10807320 ~ 10820053 (+)
CI01000001_10749174_10779222 ARHGEF25A coding upstream 240025 10749174 ~ 10779454 (+)
CI01000001_11099313_11137500 HUWE1 coding downstream 70789 11099313 ~ 11138278 (+)
CI01000001_11138617_11139541 NA coding downstream 109761 11138285 ~ 11139673 (+)
CI01000001_11182552_11204143 NADL1.2 coding downstream 154028 11182552 ~ 11204499 (+)
CI01000001_11216246_11230227 SMC1A, SMC1A.L, SMC1AB, SMC1AL coding downstream 187722 11216246 ~ 11230321 (+)
CI01000001_11232168_11238289 SRM coding downstream 203644 11232168 ~ 11238655 (+)
G19130 NA non-coding upstream 33013 10925528 ~ 10986466 (+)
G19034 NA non-coding upstream 122574 10892437 ~ 10896905 (+)
G19088 NA non-coding upstream 144608 10874670 ~ 10874871 (+)
G19087 NA non-coding upstream 145246 10873982 ~ 10874233 (+)
G19080 NA non-coding upstream 203777 10814390 ~ 10815702 (+)
G19121 NA non-coding downstream 42380 11070904 ~ 11126159 (+)
G19226 NA non-coding downstream 140769 11169293 ~ 11183770 (+)
G19096 NA non-coding downstream 226545 11255069 ~ 11304024 (+)
G19108 NA non-coding downstream 353050 11381574 ~ 11381987 (+)
G19258 NA non-coding downstream 359119 11387643 ~ 11387959 (+)
G19039 NA other upstream 165496 10850924 ~ 10853983 (+)
CI01000001_10538498_10539667 RPS26 other upstream 479633 10538388 ~ 10539846 (+)
G18937 NA other upstream 543090 10474984 ~ 10476389 (+)
CI01000001_10395420_10396473 NA other upstream 622774 10394851 ~ 10396705 (+)
G18872 NA other upstream 738110 10271146 ~ 10281369 (+)
G19314 NA other downstream 472670 11501194 ~ 11558673 (+)
G19395 NA other downstream 652798 11681322 ~ 11681817 (+)
CI01000001_13514115_13517063 NA other downstream 2484880 13514115 ~ 13517063 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location