G161833


Basic Information

Item Value
gene id G161833
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056722.1
NCBI id CM032091.1
chromosome length 21790128
location 9421690 ~ 9422031 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU239627
CTAATTACTAAAGTGATGATCTAAACAGCAACACAGTGCCAACccttatgaaaaagaaaatacatcaagtcattgcattttaataatttgtttgttttattaatgcttgGAAGAAGTTCACTTATTTTGATGTTGACTTTCATGATTACCCTAGCTTGTCAGTATATTAAaccatatttaaaacacaatatatgcatttattaaattgcataatGTTTTACTCAATGTAAAAAGAGCAATATAAAGTTCAGCTAattccatttaataaaaacacaatctgACGTAATACTTTCTCATGCAATTAACATTGAACATAACAGTTCACATATTTTTTGAAAgcat

Function

GO: NA

KEGG:

id description
ko05014 Amyotrophic lateral sclerosis

RNA

RNA id representative length rna type GC content exon number start site end site
TU239627 True 342 lncRNA 0.27 1 9421690 9422031

Neighbor

gene id symbol gene type direction distance location
zic1 zic1,LOC107588038,LOC107557563 coding downstream 74833 9343567 ~ 9346857 (-)
agtr1b agtr1b,LOC107681633,LOC107588039,LOC107739124,LOC107717774,LOC107557561,LOC107663725 coding downstream 187743 9224012 ~ 9233947 (-)
cpb1 cpb1,LOC107687549 coding downstream 197872 9218824 ~ 9223818 (-)
fzd8a fzd8a,fzd8,LOC107739125,LOC107717597 coding downstream 366285 9052785 ~ 9055405 (-)
klf6a klf6a,klf6,LOC107717335,LOC107687512,LOC107739128,LOC107663727 coding downstream 541558 8873506 ~ 8880132 (-)
LOC122330247 LOC107588032 coding upstream 334117 9756148 ~ 9766264 (-)
dipk2ab dia1b,cunh3orf58,c3h3orf58,LOC107687522,LOC107739121,LOC107588034,LOC107741829 coding upstream 656770 10078801 ~ 10108057 (-)
chst2b chst2b,chst2,LOC107566295,LOC107675126,LOC107588116,LOC107739140,LOC107687551,LOC107741833 coding upstream 752570 10174601 ~ 10177491 (-)
pcolce2b pcolce2,pcolce2b,LOC107588030,LOC107675309,LOC107687553,LOC107566300 coding upstream 801064 10223095 ~ 10235432 (-)
acbd5a acbd5,LOC107739116,LOC107758260,LOC107675165 coding upstream 822311 10244342 ~ 10255386 (-)
G161758 NA non-coding downstream 375783 9045613 ~ 9045907 (-)
G161751 NA non-coding downstream 387407 9031218 ~ 9034283 (-)
G161737 NA non-coding downstream 528323 8893148 ~ 8893367 (-)
G161734 NA non-coding downstream 534476 8886948 ~ 8887214 (-)
G161725 pfkpa,LOC107687511,LOC107588098,LOC107716838 non-coding downstream 625853 8793901 ~ 8795837 (-)
G161839 NA non-coding upstream 8259 9430290 ~ 9461957 (-)
G161878 NA non-coding upstream 425362 9847393 ~ 9847860 (-)
G161973 NA non-coding upstream 713416 10135447 ~ 10158815 (-)
G161981 trpc1,LOC107687523,LOC107588031,LOC107739119,LOC107675135,LOC107758253 non-coding upstream 789120 10211151 ~ 10214096 (-)
G161985 NA non-coding upstream 868144 10290175 ~ 10294158 (-)
LOC122330139 lyrm4,LOC107692762,LOC107570464,LOC107653796,LOC107713738 other downstream 1338760 8038747 ~ 8082930 (-)
pard3aa pard3,LOC107713921,LOC107734328,LOC108431315,LOC107692754 other downstream 1583169 7390095 ~ 7838521 (-)
ralaa ralaa,rala,LOC107565693,LOC103042957,LOC108268083,LOC101477841,LOC107655676 other downstream 2324851 7090514 ~ 7096839 (-)
G161327 LOC107713878 other downstream 2416282 6945186 ~ 7005408 (-)
G161224 lancl2,LOC107561957,LOC107693471,LOC107566172,LOC107655705 other downstream 2951589 6396171 ~ 6470101 (-)
G161893 LOC107563058 other upstream 509264 9931295 ~ 9932802 (-)
G161992 NA other upstream 858766 10280797 ~ 10286608 (-)
myo3a myo3a,LOC107687530,LOC107675224,LOC107739129,LOC107758395,LOC107570047 other upstream 944142 10366173 ~ 10436463 (-)
zgc:174877 zgc:174877,LOC107687531,LOC107709772,LOC107588023 other upstream 1029528 10451559 ~ 10458476 (-)
dpp6a dpp6a,dpp6,LOC107755713,LOC107664663,LOC107655790 other upstream 1244480 10666511 ~ 11010248 (-)

Expression


Co-expression Network