G161893 (LOC107563058)


Basic Information

Item Value
gene id G161893
gene name LOC107563058
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056722.1
NCBI id CM032091.1
chromosome length 21790128
location 9931295 ~ 9932802 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU239703
agagcgccaggtgacatttcttggggttggcggtgagtccagcccgtcgaagatcgcgaagcaccctccgcaggcgctccagatggtcctcccaggtctccgagtggaTCACAAGGTCGTCAAGATAGGCTGCGGCGTACTGTTGGTGGGGTCGTAGTAAGACGTCCATTAGTCgctggaaggtggctggtgccccgtgtagaccgaagggaagggaccggtattgccagtggccgccgggggtggagaaagccgtttttggcttggcttcctctgacagcgggacctgccagtatcctttggtgagatcgagggtggagatataccgggcccttccaagacgttccagcagttcgtctacacggggcatgggatatccgtcaaactcggagacctggttgagtcgccggtagtcattgcagaagcggagggtgccgtcaggttttggaaccaggacgatggggctggaccacgggctcgtcgatggttcaatcacccccaacttcagcatctgatttacctcctcctcaatagctcgccgacgagcctcagggatccggtagggccgctgccggacgatgacgccgggaggggtccggatctcgtgctggaggaggttagtctgcccgggcgtggacgagaacacatccgagaactgaccgaccagatgttggagttccgtcttCTGTGCGGGAGCGAGCAGGGCATTGGTGTCGACGACCGGGCCCTCCTGAACGGTGAGTGCGGATAGGTgttccctagtccccacccacttcttcaacaagttaatgtggtatatttgttcggtACGTCGACGGTCtggttggcggactcggtaGGTAACCGGGCCGATCTTTTCCAGGACGGTATATGggccctgccaggtggccaggaatttgcatgcattggtggggaccagtaccatgacccggtcgccgacctggaattcccggggttgtgcagggcggttatagtgccgttgttgttgctgctgggcctgcgtcatgtgctcccgcGCACGAgggcatcacccgttcaatccggtcccgcatggcttgaACATGTTccacgaccgacctctgggcatccggctgctgctgctgctcccaggcctcttttgccacgtccagcaggcctcgcggctgtcgaccgaacagcaactcgaatggggtaaagccggtggaggcctggggcacctcacgcaccccgaagaggacgtaggggagcatctggtcccagtcgcgtttgtcctcggagacaacccttctcaacatttgcttcagtgtctggttgaaccgctccacaagtccgtccgtctgggggtggtacactgaggtgcgcagctgctggatccgtagcaaccggcagaggtcggccatcacccgggacatgaacggggtgccttggtcggtcagtatctccccgggtatccccactctggtggacagggtgaagagctcctgggcgatcgccttggcggtggctttgcggagtgggatggcttcggg

Function

NR:

description
PREDICTED: very-long-chain 3-oxoacyl-CoA reductase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU239703 True 1508 TUCP 0.61 1 9931295 9932802

Neighbor

gene id symbol gene type direction distance location
LOC122330247 LOC107588032 coding downstream 165031 9756148 ~ 9766264 (-)
zic1 zic1,LOC107588038,LOC107557563 coding downstream 584438 9343567 ~ 9346857 (-)
agtr1b agtr1b,LOC107681633,LOC107588039,LOC107739124,LOC107717774,LOC107557561,LOC107663725 coding downstream 697348 9224012 ~ 9233947 (-)
cpb1 cpb1,LOC107687549 coding downstream 707477 9218824 ~ 9223818 (-)
fzd8a fzd8a,fzd8,LOC107739125,LOC107717597 coding downstream 875890 9052785 ~ 9055405 (-)
dipk2ab dia1b,cunh3orf58,c3h3orf58,LOC107687522,LOC107739121,LOC107588034,LOC107741829 coding upstream 145999 10078801 ~ 10108057 (-)
chst2b chst2b,chst2,LOC107566295,LOC107675126,LOC107588116,LOC107739140,LOC107687551,LOC107741833 coding upstream 241799 10174601 ~ 10177491 (-)
pcolce2b pcolce2,pcolce2b,LOC107588030,LOC107675309,LOC107687553,LOC107566300 coding upstream 290293 10223095 ~ 10235432 (-)
acbd5a acbd5,LOC107739116,LOC107758260,LOC107675165 coding upstream 311540 10244342 ~ 10255386 (-)
pdss1 pdss1,LOC107739114,LOC107758317,LOC107675251,LOC107687541 coding upstream 361974 10294776 ~ 10302071 (-)
G161878 NA non-coding downstream 83435 9847393 ~ 9847860 (-)
G161839 NA non-coding downstream 469338 9430290 ~ 9461957 (-)
G161833 NA non-coding downstream 509264 9421690 ~ 9422031 (-)
G161758 NA non-coding downstream 885388 9045613 ~ 9045907 (-)
G161751 NA non-coding downstream 897012 9031218 ~ 9034283 (-)
G161973 NA non-coding upstream 202645 10135447 ~ 10158815 (-)
G161981 trpc1,LOC107687523,LOC107588031,LOC107739119,LOC107675135,LOC107758253 non-coding upstream 278349 10211151 ~ 10214096 (-)
G161985 NA non-coding upstream 357373 10290175 ~ 10294158 (-)
LOC122329558 NA non-coding upstream 395867 10328669 ~ 10341363 (-)
G162020 NA non-coding upstream 513237 10446039 ~ 10446427 (-)
LOC122330139 lyrm4,LOC107692762,LOC107570464,LOC107653796,LOC107713738 other downstream 1848365 8038747 ~ 8082930 (-)
pard3aa pard3,LOC107713921,LOC107734328,LOC108431315,LOC107692754 other downstream 2092774 7390095 ~ 7838521 (-)
ralaa ralaa,rala,LOC107565693,LOC103042957,LOC108268083,LOC101477841,LOC107655676 other downstream 2834456 7090514 ~ 7096839 (-)
G161327 LOC107713878 other downstream 2925887 6945186 ~ 7005408 (-)
G161224 lancl2,LOC107561957,LOC107693471,LOC107566172,LOC107655705 other downstream 3461194 6396171 ~ 6470101 (-)
G161992 NA other upstream 347995 10280797 ~ 10286608 (-)
myo3a myo3a,LOC107687530,LOC107675224,LOC107739129,LOC107758395,LOC107570047 other upstream 433371 10366173 ~ 10436463 (-)
zgc:174877 zgc:174877,LOC107687531,LOC107709772,LOC107588023 other upstream 518757 10451559 ~ 10458476 (-)
dpp6a dpp6a,dpp6,LOC107755713,LOC107664663,LOC107655790 other upstream 733709 10666511 ~ 11010248 (-)
G162152 LOC107550009,LOC107709778 other upstream 1419259 11352061 ~ 11352859 (-)

Expression


Co-expression Network