LOC122329611 (LOC107687542,LOC107709774)


Basic Information

Item Value
gene id LOC122329611
gene name LOC107687542,LOC107709774
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056722.1
NCBI id CM032091.1
chromosome length 21790128
location 10447894 ~ 10450508 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043225953.1
AGTGTGGTGTAACCAGAGCCCCGCCCCCTTCGCTGGTGTAACCGACATGTAGAAAGGCGTGCTGCTGTCATGTGACCGTCAAACAGGAAATGGTGTCTCGGAGACGAACCCTTCAAATCGTGATGGCTGTGTGTCAAGATGCCACTATCAAACAACGAGAAATCGGCTCGGCATAGAGCAAAGGTGAACGCTGATCCTGTTGCCAGGGCCAGATACCttgaaaaaagaagagagagTTATCAGCGAcgaaaaagagagggaaagactAAACATCCTCCAGTAGCCGAACTCTCTAAAGCAAGACAGGAGGAACTGAGGCAGAAATGGAGACATTACCAGAGAAGCCGCAGGAGCAAGATTCGTGATTTACCACTGCAGTACTCCTCTCAGGTTGAGATGAACTCTCAGTGGCTGCAGGACTTTGCTCCATACTCTCCCAGCAGTGAAGCTGACTCCAGCTCCGCCATGCTGGAAAGTCCCGTGACCAGCTACAGCTGGATAAAACAGGAGCCAGAGACCGTAGTAATCCAGTGTGACAATGTGAACACCGAGACAGAGCAGGACACAACTCCAAGCGGTGCCGCTTCCATCTCCACGACGCCTCCGATCGCGGGAGATTTGCCCAGCAGCGTTATGCTGACCATCGCCAAACTTCACTGTTTGCTGGAGAGCAAACAGGAGAAGATCGACATTCTGGAGAGACAGGTGCAGGACTTGCAGGAGGATCGCAGGTTCCTCCGCTCACAGATCGAGAACCTCACCGGCGCTCTCTCTGCTCGTGTCTGTCGAGGGATTTCAGACGAAACGGTCGGGAAACGTTAGCGCGTTTAGGTCGGAGCATAAACTGTAACTGAACGGACTCTCAATGTTCAATCATTcgttgttttgttattgttattttatcattgttattaatttatgtaaacGGACAATTACGCATTAGGCattcaaatctgttttattattatcgtGATTATGATcgtaattattattgttaaagaTAATTTACAAAGTTAAAAtgcactcaccctcatgtcgccTTCATATGTGTATGGCTTTTTAGGGACCATAACATTTCTTTGCTATCTTTTGTTGTTAAAGTTGTGGTCACACTTACCACtgtttatcaaatatatataaaattctgttatttcaATAGCAGCTTGTGGCTATCACCACCAGAATATTCACCCATCCGAAAACACAAATAAGCTAAATCGATCCTTGTTAAATTGTAAATGCTGTCAGCATAATTCCACTTAAATTAtaacagaaaattatttttattaaagttgaGACTGTTATAGA

Function

NR:

description
PREDICTED: uncharacterized protein LOC107687542

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043225953.1 True 1308 mRNA 0.45 5 10447894 10450508

Neighbor

gene id symbol gene type direction distance location
gad2 gad2,LOC107687529,LOC107675215 coding downstream 82285 10347688 ~ 10365609 (-)
LOC122329925 apbb1ip,LOC107739115,LOC107758334,LOC107571746,LOC107687528 coding downstream 120911 10309244 ~ 10326983 (-)
pdss1 pdss1,LOC107739114,LOC107758317,LOC107675251,LOC107687541 coding downstream 145823 10294776 ~ 10302071 (-)
acbd5a acbd5,LOC107739116,LOC107758260,LOC107675165 coding downstream 192508 10244342 ~ 10255386 (-)
pcolce2b pcolce2,pcolce2b,LOC107588030,LOC107675309,LOC107687553,LOC107566300 coding downstream 212462 10223095 ~ 10235432 (-)
anxa13 anxa13,LOC107588022,LOC107570049,LOC107709773,LOC107675241,LOC107758360,LOC108431991 coding upstream 8105 10458613 ~ 10464895 (-)
gpr158a gpr158a,LOC107709775,LOC107588021,LOC107570048,LOC107687544,LOC107675282 coding upstream 24665 10475173 ~ 10553209 (-)
LOC122329576 LOC107755704,LOC107655793,LOC107579495 coding upstream 105813 10556321 ~ 10561746 (-)
LOC122329874 LOC107709776,LOC107664664,LOC107588019 coding upstream 117870 10568378 ~ 10646546 (-)
prtfdc1a unm_sa821,prtfdc1,LOC107755703,LOC107588087,LOC107664644,LOC107655792 coding upstream 199259 10649767 ~ 10659742 (-)
G162020 NA non-coding downstream 1467 10446039 ~ 10446427 (-)
LOC122329558 NA non-coding downstream 106531 10328669 ~ 10341363 (-)
G161985 NA non-coding downstream 153736 10290175 ~ 10294158 (-)
G161981 trpc1,LOC107687523,LOC107588031,LOC107739119,LOC107675135,LOC107758253 non-coding downstream 233798 10211151 ~ 10214096 (-)
G161973 NA non-coding downstream 289079 10135447 ~ 10158815 (-)
G162081 NA non-coding upstream 102990 10553498 ~ 10554047 (-)
G162102 NA non-coding upstream 669198 11119706 ~ 11149416 (-)
G162193 NA non-coding upstream 1036422 11486930 ~ 11494948 (-)
G162204 NA non-coding upstream 1065330 11515838 ~ 11518808 (-)
G162218 NA non-coding upstream 1076274 11526782 ~ 11528934 (-)
myo3a myo3a,LOC107687530,LOC107675224,LOC107739129,LOC107758395,LOC107570047 other downstream 11431 10366173 ~ 10436463 (-)
G161992 NA other downstream 161286 10280797 ~ 10286608 (-)
G161893 LOC107563058 other downstream 515092 9931295 ~ 9932802 (-)
LOC122330139 lyrm4,LOC107692762,LOC107570464,LOC107653796,LOC107713738 other downstream 2364964 8038747 ~ 8082930 (-)
pard3aa pard3,LOC107713921,LOC107734328,LOC108431315,LOC107692754 other downstream 2609373 7390095 ~ 7838521 (-)
zgc:174877 zgc:174877,LOC107687531,LOC107709772,LOC107588023 other upstream 1051 10451559 ~ 10458476 (-)
dpp6a dpp6a,dpp6,LOC107755713,LOC107664663,LOC107655790 other upstream 216003 10666511 ~ 11010248 (-)
G162152 LOC107550009,LOC107709778 other upstream 901553 11352061 ~ 11352859 (-)
txndc5 txndc5,LOC107730007,LOC107678545,LOC107557239 other upstream 1131624 11582132 ~ 11619080 (-)
mppe1 mppe1,LOC107726146,LOC107702491,LOC105030507 other upstream 1806274 12256782 ~ 12304689 (-)

Expression


Co-expression Network