LOC122333283


Basic Information

Item Value
gene id LOC122333283
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025047901.1
NCBI id JAEQBD010000246.1
chromosome length 542128
location 20680 ~ 40876 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU265407
GACGTTTACACCTGATCGTTTTTTCTGATCAAAAAACCTTATCATTAACCTAATcctgatttttaatgtttatgcggacatacatgaacataaagagaaaaaacaaagacattttgagaagtTGTCTAGAAACGTTTTGATCAAAGCAAGTCTTCagctgtggagcagaaagacacttccttattcatAAGTCAATGACAGAAGATGACGTTGGAGCAGAATCTGGATACATGGAAGGTGCTGTTGTTGTTGCCGATttctgatataat
>TU265408
CTCTGTAATTctgttaaatgtatattttgtgtttaattctgAAATCCAATAATCTCTCTCTTCGTTACACTAAGATCCAGTCCAGATGAGAAAATGCCCCGACTCACAGTCAGCATTGATATAAATTCTGAAACAGGTGCGAGTGTAAATGCTCCTCTATTGACTGCGAACACCTTCACAGGACCAGTAACCATTTTTGGCTCAAATGCTGAAGGAAACGATAAACAGAAATCCTCAGAGATGGCAGAggaacacagagaaaaacaagagctgcaaaactttttggaaactcacaaaacaaacatgaaggagaaaaacagaatatatttttgaggGCAACAAAGACAAGAAAGCA
>TU265409
CATAAATGCTTAGAGCAAGAGAAAATAAGATCCAGTCCAGATGAGAAAATGCCCCGACTCACAGTCAGCATTGATATAAATTCTGAAACAGGTGCGAGTGTAAATGCTCCTCTATTGACTGCGAACACCTTCACAGGACCAGTAACCATTTTTGGCTCAAATGCTGAAGGAAACGATAAACAGAAATCCTCAGAGATGGCAGAggaacacagagaaaaacaagagctgcaaaactttttggaaactcacaaaacaaacatgaaggagaaaaacagaatatatttttgaggGCAACAAAGACAAGAAAGCA
>XR_006248612.1
ACGTTTACACCTGATCGTTTTTTCTGATCAAAAAACCTTATCATTAACCTAATcctgatttttaatgtttatgcggacatacatgaacataaagagaaaaaacaaagacattttgagaagtTGTCTAGAAACGTTTTGATCAAAGCAAGTCTTCagctgtggagcagaaagacacttccttattcatAAGTCAATGACAGAAGATGACGTTGGAGCAGAATCTGGATACATGGAAGATCCAGTCCAGATGAGAAAATGCCCCGACTCACAGTCAGCATTGATATAAATTCTGAAACAGGTGCGAGTGTAAATGCTCCTCTATTGACTGCGAACACCTTCACAGGACCAGTAACCATTTTTGGCTCAAATGCTGAAGGAAACGATAAACAGAAATCCTCAGAGATGGCAGAggaacacagagaaaaacaagagctgcaaaactttttggaaactcacaaaacaaacatgaaggagaaaaacagaatatatttttgaggGCAACAAAGACAAGAAAGCATGTAACTCAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU265407 False 269 lncRNA 0.36 2 20680 35758
TU265408 False 355 lncRNA 0.38 3 36537 40865
TU265409 False 310 lncRNA 0.39 4 35824 40865
XR_006248612.1 True 528 lncRNA 0.38 5 20681 40876

Neighbor

gene id symbol gene type direction distance location
LOC122333289 LOC107666675,LOC107582334 coding downstream 44083 84959 ~ 91322 (+)
txnrd3 txnrd1,txnrd3,LOC107705821,LOC107666707,LOC107705897,LOC100702976 coding downstream 66816 107692 ~ 120424 (+)
ntan1 ntan1,LOC107666719 coding downstream 82057 122933 ~ 127552 (+)
orc4 orc4,LOC107705817 coding downstream 87507 128383 ~ 134035 (+)
LOC122333286 NA coding downstream 143708 184584 ~ 187502 (+)
LOC122333275 NA non-coding downstream 1673 42549 ~ 44818 (+)
G178908 LOC107666675,LOC107582334 non-coding downstream 1921 42797 ~ 91317 (+)
G178938 LOC107582301,LOC107705816,LOC107666699,LOC107572302,LOC107705898,LOC107691069 non-coding downstream 102326 143202 ~ 143941 (+)
G178946 NA non-coding downstream 127267 168143 ~ 168360 (+)
G178947 NA non-coding downstream 128926 169802 ~ 171562 (+)

Expression


Co-expression Network