G178947


Basic Information

Item Value
gene id G178947
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025047901.1
NCBI id JAEQBD010000246.1
chromosome length 542128
location 169802 ~ 171562 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU265464
gtgtaattgttttatttgctatGCCAGGGCATTTCTAAGCTGTTGCTCCACGGTTCAAAGTGGTCTTAAGTATTGCTGTGGAATTGTTTGGGTGTTCTGCACGACTGCGGAGTGTTTTCTTGAGATGTATAGTATGTCAGTGGGGTGATTTAACCTGTTCTACAGCTTGGGTTTTCCAGGTTGCTTCGCAATCAAATGCCTGCCAGGCTTCTGTTTGCACGAGAAAGCATATAAAGGAAACACGCAGAAAAgtaaaaaggtaatttaatgTGAATCTTTTGCATAAAATCCATTAAGGCATGCCATATTATAATCTTTACTAGTAATGCTAAGCTACATTAGTGTACTTCCTATACAGAACAAGCATCAACCCTGAAACTGTCTGCACGGAACTGAAGATATGATCAAAATAGTCTTTCTGTTGTCTTCACTGGACAGACCATTGAGAGCAATCAGTCGGCAATTattgtgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagcgtatTTCAGTCGTCTAAAGTGCTTCTATGGTTCCAGACAGGCGCTCTGTATTAAATTACTGCTAATTTGTGTCAGGTTTTGGCTGGGTGAAGTTTATCTCATGTGGATCAAAGATCATTAATTCCTGGTTTATACTCTAAAGTGTTCATTCCCAGAAGTCATAAAGAATCCCACAATACATCTGCAGCTCCTCATTATGGATGTGACTCGATTCATCAGACTCACGACTGATTCTGAGAGCTTCTGATACTGTGATGAATCTGCTTCTAGACGGGTCCACACATAGAACTAATGAATTGCGGGCAGCACGTCAAGTAGCTGAATGctgttttgttaaatgaatgtgcATTTAATATAGGAAGCATAAAAGCGTATAGCCCACGTACAGaatactttaacactattaattagatgatttattttgattagttaTCCTTTTCGTATTATTAATCAACATATTGAatcaataataacattttgatttgtGTCAGAATTTGATTTTTACAGAGACACAAACCAACCaacccataataataataataaaattaaaaaatccatCGATGATACTTCCTCCataatgatgtcacttcctgttggGTGATGCCATTAAGTGACTGGCTTCTGCTAAAtaaatagttcactcaaaattgAAACCTTTGTCCATCcgagatgagtttgtttcttcatcggatctGGAGCAatgcagcattgcatcactCAATGGGTgccgataaaaacatcacaaaaaccaCACAGACCTCTCCAGTctatcagttaacatctggagaagtgAAAAGGTGTGTATTTGTAAGAGACACGTCcattattaagatattttttaacttaaaacgaGTAAATGAGTCTTTTAAAATCCTTCTTTACAAAGTGAAAAATGAAGGAAAGCGCCACTGGGTGAGATTGtaagttttgcatttttatccaTTAAGTGGTGCCCGAATGCATGGGCAGTATATGTGAGAGAGGCATTGTGGGCCTGTTCATGTCATCAGCCATCTATGTGCTGTCTAAGAAACTCTATTTTGGTCTCTCTGATGGTTTCCACACACCGAAAGCTGAGAGCTGCTGGCTGCACTCCTCCACCGTCCTCTGAAGCTCAGGCTGATGTGAACAGATAATGCTGAAGGCAGTGCTCTCTGGTGGAGCTGATGTGACGTTACA

Function

GO:

id name namespace
GO:0022624 proteasome accessory complex cellular_component
GO:0008537 proteasome activator complex cellular_component
GO:1905369 endopeptidase complex cellular_component
GO:0000502 proteasome complex cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU265464 True 1714 lncRNA 0.39 3 169802 171562

Neighbor

gene id symbol gene type direction distance location
orc4 orc4,LOC107705817 coding upstream 35767 128383 ~ 134035 (+)
ntan1 ntan1,LOC107666719 coding upstream 42250 122933 ~ 127552 (+)
txnrd3 txnrd1,txnrd3,LOC107705821,LOC107666707,LOC107705897,LOC100702976 coding upstream 49378 107692 ~ 120424 (+)
LOC122333289 LOC107666675,LOC107582334 coding upstream 78480 84959 ~ 91322 (+)
LOC122333286 NA coding downstream 13022 184584 ~ 187502 (+)
G178946 NA non-coding upstream 1442 168143 ~ 168360 (+)
G178938 LOC107582301,LOC107705816,LOC107666699,LOC107572302,LOC107705898,LOC107691069 non-coding upstream 25861 143202 ~ 143941 (+)
G178908 LOC107666675,LOC107582334 non-coding upstream 78485 42797 ~ 91317 (+)
LOC122333275 NA non-coding upstream 124984 42549 ~ 44818 (+)
LOC122333283 NA non-coding upstream 128926 20680 ~ 40876 (+)
G178948 NA non-coding downstream 1778 173340 ~ 173646 (+)
G178956 NA non-coding downstream 22720 194282 ~ 194540 (+)
G178957 NA non-coding downstream 40880 212442 ~ 212848 (+)
G178978 NA non-coding downstream 185066 356628 ~ 420130 (+)
LOC122333285 NA non-coding downstream 252037 423599 ~ 481509 (+)

Expression


Co-expression Network