G178956


Basic Information

Item Value
gene id G178956
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025047901.1
NCBI id JAEQBD010000246.1
chromosome length 542128
location 194282 ~ 194540 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU265477
CGTGTGCTGCCTCAGCTGTGTCTCTTGATGTTTCAAAAAAGCGTATGAATCATGGATTTCAGCAGACCTGACTATTCGGGAACATTTGTGAAGAATGTCCACGTGGATCtagcaataatattaaaatgagcaaaaccTAATGCAGCGCTCTGCTCCCTCTGGTGGCGCTGTGTGACATTACATGCTTtttaaagggctagttcaccccaaaatgaaaattaaaactcTGTTCGCAAATGACTTTGTAAGACTATGTATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU265477 True 259 lncRNA 0.41 1 194282 194540

Neighbor

gene id symbol gene type direction distance location
LOC122333286 NA coding upstream 6780 184584 ~ 187502 (+)
orc4 orc4,LOC107705817 coding upstream 60247 128383 ~ 134035 (+)
ntan1 ntan1,LOC107666719 coding upstream 66730 122933 ~ 127552 (+)
txnrd3 txnrd1,txnrd3,LOC107705821,LOC107666707,LOC107705897,LOC100702976 coding upstream 73858 107692 ~ 120424 (+)
LOC122333289 LOC107666675,LOC107582334 coding upstream 102960 84959 ~ 91322 (+)
G178948 NA non-coding upstream 20636 173340 ~ 173646 (+)
G178947 NA non-coding upstream 22720 169802 ~ 171562 (+)
G178946 NA non-coding upstream 25922 168143 ~ 168360 (+)
G178938 LOC107582301,LOC107705816,LOC107666699,LOC107572302,LOC107705898,LOC107691069 non-coding upstream 50341 143202 ~ 143941 (+)
G178908 LOC107666675,LOC107582334 non-coding upstream 102965 42797 ~ 91317 (+)
G178957 NA non-coding downstream 17902 212442 ~ 212848 (+)
G178978 NA non-coding downstream 162088 356628 ~ 420130 (+)
LOC122333285 NA non-coding downstream 229059 423599 ~ 481509 (+)
G178989 zeb2,zeb2b,LOC107712039,LOC107684631,LOC107556205,LOC107558525 non-coding downstream 293979 488519 ~ 527537 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_003825 NA non-coding NC_007122.7 CM002895.2 2315496 ~ 2316213 (-)