G178938 (LOC107582301,LOC107705816,LOC107666699,LOC107572302,LOC107705898,LOC107691069)


Basic Information

Item Value
gene id G178938
gene name LOC107582301,LOC107705816,LOC107666699,LOC107572302,LOC107705898,LOC107691069
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025047901.1
NCBI id JAEQBD010000246.1
chromosome length 542128
location 143202 ~ 143941 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU265451
gtgtgtgtgtgtgtgtgtacgtatgtatgtgtgtgtgtgtacgtatgtatgtatgtgtgtgtatatatgcatgtatgcatgtatgtatgtgtgtgcatatatgcatgcgtgtgtagatatgtatgtttgtgtgtacatatatatgtaagtatgtgtacatatatttatatatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtataacggCATCTAAATGTCGTTTGGTACCTGTGTGCAATGGCAGGCTTGTGTCCGTCCTTCAGGTTGGGAATGTCCTCGTGTAAATACGCCAATCCACGCACAAACGTCTGCGCGATCAGACAGAGCTCATTCCACGACACAACATTCGCCTTCAGGAAGTCCGTCAGCGAGCCCTGAGAcTTCTCGTGGTAAGCTGTGATGAGCCAGAGCTCGATATCGACTCCATTTCCTCGTTTTTCCGCTCCGATGAAGTGAAggatattttcatgtttcattcCGCTCAAGCTATAAATCTCATATTCGCTCTGCCATGACTGT

Function

NR:

description
PREDICTED: activin receptor type-2A-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU265451 True 527 lncRNA 0.44 2 143202 143941

Neighbor

gene id symbol gene type direction distance location
orc4 orc4,LOC107705817 coding upstream 9167 128383 ~ 134035 (+)
ntan1 ntan1,LOC107666719 coding upstream 15650 122933 ~ 127552 (+)
txnrd3 txnrd1,txnrd3,LOC107705821,LOC107666707,LOC107705897,LOC100702976 coding upstream 22778 107692 ~ 120424 (+)
LOC122333289 LOC107666675,LOC107582334 coding upstream 51880 84959 ~ 91322 (+)
LOC122333286 NA coding downstream 40643 184584 ~ 187502 (+)
G178908 LOC107666675,LOC107582334 non-coding upstream 51885 42797 ~ 91317 (+)
LOC122333275 NA non-coding upstream 98384 42549 ~ 44818 (+)
LOC122333283 NA non-coding upstream 102326 20680 ~ 40876 (+)
G178946 NA non-coding downstream 24202 168143 ~ 168360 (+)
G178947 NA non-coding downstream 25861 169802 ~ 171562 (+)
G178948 NA non-coding downstream 29399 173340 ~ 173646 (+)
G178956 NA non-coding downstream 50341 194282 ~ 194540 (+)
G178957 NA non-coding downstream 68501 212442 ~ 212848 (+)

Expression


Co-expression Network