G190168


Basic Information

Item Value
gene id G190168
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025048446.1
NCBI id JAEQBD010000791.1
chromosome length 1202875
location 294272 ~ 431788 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU282164
atttttgtaattttagctTCAGcattagttaacaataataacccCAATTCCCTCTTACAATGAGACATATGTTAGCACTTAAAGAGTAGAAATCAATCTAAATGATCAGCTTCTTTCCTTGGGCTGAATTCGCTCTGTAGCGTTTATAACAAGAGATCCAGAGGGTTTATTAGGAAACCGTTCCATTAAAAACGCAGTGTATTATTTTCCTAACCGTCCATGCAAAGGTAGAGAAGTTAAAACCTCACATCTGCATGCATGAGAACTGATGGTGTTTCTCTCAAAAGTGCTGGGATTTTGAGACTGCTGTTCTGTGTTCTGATGGGGTCCAGTTTTCTGACCCAGTCCTGCCTGAGATGGGAACACAGCTCCGTCTGGACCACGACAGGAGGATGaggacaga

Function

GO: NA

KEGG:

id description
ko04080 Neuroactive ligand-receptor interaction
ko04727 GABAergic synapse
ko04723 Retrograde endocannabinoid signaling
ko05032 Morphine addiction
ko05033 Nicotine addiction

RNA

RNA id representative length rna type GC content exon number start site end site
TU282164 True 403 lncRNA 0.41 2 294272 431788

Neighbor

gene id symbol gene type direction distance location
rab12 rab12,LOC107687899,LOC107696134,LOC107750912,LOC107754587 coding upstream 42380 244409 ~ 251892 (+)
LOC122335699 piezo2,LOC107687923,LOC107750931,LOC107696634,LOC107569629 coding upstream 57748 158203 ~ 236524 (+)
ranbp3b ranbp3b,ranbp3,LOC107750915,LOC107754592,LOC107552724 coding upstream 200407 75122 ~ 93865 (+)
LOC122335659 LOC107596237,LOC107754594,LOC107687905 coding upstream 246797 41070 ~ 47475 (+)
ndufv2 ndufv2,LOC107696125,LOC107750909,LOC107569634,LOC107596229,LOC107754586,LOC107687898 coding downstream 40065 471853 ~ 477482 (+)
ankrd12 ankrd12,LOC107750907,LOC107754582,LOC107569631,LOC107696110 coding downstream 48720 480508 ~ 526288 (+)
twsg1a twsg1,twsg1a,LOC107569636,LOC107750930,LOC107596295 coding downstream 95705 527493 ~ 539618 (+)
rnf126 rnf126,LOC107569633,LOC107596227,LOC107754583,LOC107750906 coding downstream 109601 541389 ~ 550642 (+)
LOC122335697 LOC107696097,LOC107750929,LOC107596267,LOC107569625,LOC107754601,LOC104948982 coding downstream 122296 554084 ~ 612109 (+)
LOC122335680 NA non-coding upstream 29336 264053 ~ 264936 (+)
G190164 NA non-coding upstream 51900 239480 ~ 242372 (+)
G190118 abhd8a,LOC107750932,LOC107575227,LOC107696148,LOC107754588,LOC107596234,LOC107687901 non-coding upstream 154395 137144 ~ 139877 (+)
LOC122335677 NA non-coding upstream 265409 25608 ~ 28863 (+)
G190184 NA non-coding downstream 3227 435015 ~ 457595 (+)
G190286 NA non-coding downstream 183418 615206 ~ 618727 (+)
G190288 NA non-coding downstream 187171 618959 ~ 619543 (+)
G190296 NA non-coding downstream 210648 642436 ~ 644346 (+)
G190298 NA non-coding downstream 213371 645159 ~ 645386 (+)
LOC122335676 rab8a,LOC107687930,LOC107696202 other upstream 273899 13786 ~ 20373 (+)
sirt6 sirt6,LOC107600234,LOC107696599,LOC107596265,LOC107667852 other downstream 385545 817333 ~ 836678 (+)
rab31 rab31,LOC107667863,LOC107696047,LOC107750901 other downstream 474474 906262 ~ 914067 (+)
chico chico,LOC107558286,LOC107696010,LOC107667856,LOC107600187,LOC107713638 other downstream 576362 1008150 ~ 1022881 (+)

Expression


Co-expression Network