G190298


Basic Information

Item Value
gene id G190298
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025048446.1
NCBI id JAEQBD010000791.1
chromosome length 1202875
location 645159 ~ 645386 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU282380
ACCAGGTGAAGTTGTTCGGATGGGTATGGCGTTCCTGCCTCTGTCGTCGCCCGCAGCTGCCTGGAGCAGGGTCAGGAACCTCTGAATCAATCAGTGAGGGGGTACGAGCACACAGATGGTCACACAGAGCCGCGTGTGGCCCGCAGCAGGTGAGCCGAGAGCAGAACAACATCTGAACTGAGACTGACCCGTCACCTGATGACCGCTTTTATCTGATCAGGACCTCAG

Function

GO: NA

KEGG:

id description
ko04964 Proximal tubule bicarbonate reclamation

RNA

RNA id representative length rna type GC content exon number start site end site
TU282380 True 228 lncRNA 0.58 1 645159 645386

Neighbor

gene id symbol gene type direction distance location
LOC122335697 LOC107696097,LOC107750929,LOC107596267,LOC107569625,LOC107754601,LOC104948982 coding upstream 33050 554084 ~ 612109 (+)
rnf126 rnf126,LOC107569633,LOC107596227,LOC107754583,LOC107750906 coding upstream 94517 541389 ~ 550642 (+)
twsg1a twsg1,twsg1a,LOC107569636,LOC107750930,LOC107596295 coding upstream 105541 527493 ~ 539618 (+)
ankrd12 ankrd12,LOC107750907,LOC107754582,LOC107569631,LOC107696110 coding upstream 118871 480508 ~ 526288 (+)
ndufv2 ndufv2,LOC107696125,LOC107750909,LOC107569634,LOC107596229,LOC107754586,LOC107687898 coding upstream 167677 471853 ~ 477482 (+)
zmp:0000000521 zmp:0000000521,LOC107696078,LOC107596226,LOC108442439,LOC108280721,LOC105888700 coding downstream 7355 652741 ~ 661904 (+)
hsd11b1lb LOC107596225,LOC107729988,LOC107667865,LOC107750927 coding downstream 17232 662618 ~ 668191 (+)
ralbp1 ralbp1,LOC107696059,LOC107667860 coding downstream 248742 894128 ~ 907048 (+)
LOC122335651 LOC568754,LOC107558277,LOC107667866,LOC107600185,LOC107729992,LOC107750900,LOC107696035,LOC108427118 coding downstream 275571 920957 ~ 928189 (+)
gna11b gna11b,LOC103033252,LOC107600186,LOC108427217,LOC107667855,LOC107696027,LOC108280682,LOC107558284,LOC105889474,LOC107750923 coding downstream 329187 974573 ~ 1007421 (+)
G190296 NA non-coding upstream 813 642436 ~ 644346 (+)
G190288 NA non-coding upstream 25616 618959 ~ 619543 (+)
G190286 NA non-coding upstream 26432 615206 ~ 618727 (+)
G190184 NA non-coding upstream 187564 435015 ~ 457595 (+)
G190168 NA non-coding upstream 213371 294272 ~ 431788 (+)
G190300 NA non-coding downstream 469 645855 ~ 646263 (+)
G190302 NA non-coding downstream 2833 648219 ~ 648493 (+)
G190311 NA non-coding downstream 31237 676623 ~ 681427 (+)
G190314 LOC107569623,LOC107696073,LOC107750904,LOC108280171,LOC108444550,LOC107667861 non-coding downstream 58150 703536 ~ 709464 (+)
LOC122335698 NA non-coding downstream 200554 845940 ~ 852752 (+)
G190175 mtcl1,LOC107596231,LOC107569627,LOC107754603,LOC107696625 other upstream 298005 338941 ~ 347154 (+)
LOC122335676 rab8a,LOC107687930,LOC107696202 other upstream 624786 13786 ~ 20373 (+)
sirt6 sirt6,LOC107600234,LOC107696599,LOC107596265,LOC107667852 other downstream 171947 817333 ~ 836678 (+)
rab31 rab31,LOC107667863,LOC107696047,LOC107750901 other downstream 260876 906262 ~ 914067 (+)
chico chico,LOC107558286,LOC107696010,LOC107667856,LOC107600187,LOC107713638 other downstream 362764 1008150 ~ 1022881 (+)

Expression


Co-expression Network