ndufv2 (ndufv2,LOC107696125,LOC107750909,LOC107569634,LOC107596229,LOC107754586,LOC107687898)


Basic Information

Item Value
gene id ndufv2
gene name ndufv2,LOC107696125,LOC107750909,LOC107569634,LOC107596229,LOC107754586,LOC107687898
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025048446.1
NCBI id JAEQBD010000791.1
chromosome length 1202875
location 471853 ~ 477482 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043233552.1
TATTCAGACTCGGCGCTCTGAGCCTCCTCTGCGTGACCAGACCCGCTCAATCGAGCCCGCGCTGCTTGATATCCGCCATTGCTTGTGTTTAGTGTGACCGAGCGCGTTGAAAAGATGTATTTATCTTCAACTCTGCGCTCTGCCGTGTCTTATGCGGCGAGGCAGGTACGTAGTTTGCACCAGACATCGGCTcgagctggagcaggaggaatCTTTGTGCACAGAGACACACCAGACAACAACCCAGAGACTCCTTTTGAATTCACCCCGGAGAACATGAAAAGAGTTGAGGCCATCATGAATAATTACCCAGAGGGACACAAGGCGGCCGCCACTATTCCTGTGCTGGATTTGGCTCAGAGGCAGAACGGATGGCTTCCTATTTCAGCAATGAACAAGGTGGCAGAGATCCTGGGAATCGCTCCAATGAGGGTTTATGAAGTAGCGACTTTCTACACCATGTTCCTCCGTCAGCCGGTGGGAAAGTACCACATCCAGATCTGCACCACTACGCCCTGCATGCTCTGCGACTCCGACAGCATCCTGGAGGCCATCCAGAACAAACTGGGCATCAAAGTCGGCGAAACCACAGGAGATAAATTATTCACACTGACAGAAGTCGAATGCCTCGGGGCCTGTGTGAACGCACCGATGGTCCAAATCAATGATAACTATTACGAGGATCTTAAACCGTCAGACATCGAGCAGATTATTGATGAACTGAAGGCAGGCAGAGTTCCTCCTCCTGGACCCAGGAATGGGCGTTTTTCATGTGAACCTGCCGGAGGTTTAACCTCGCTGTCAGAACCTCCTCCTGGACCGGGCTTTGGCGTGAGACCTGACCTGTAAACGGACCTCCGTGATCTCCAGTCCTTGTAAACATCAGAGGTgttgtgtatgtaaataaaatattatcattaattata

Function

symbol description
ndufv2 Predicted to enable 2 iron, 2 sulfur cluster binding activity; metal ion binding activity; and oxidoreductase activity. Predicted to be involved in mitochondrial electron transport, NADH to ubiquinone. Predicted to be part of mitochondrial respiratory chain complex I. Is expressed in several structures, including alar plate midbrain region; digestive system; optic tectum; optic vesicle; and retina. Human ortholog(s) of this gene implicated in Parkinson's disease and nuclear type mitochondrial complex I deficiency 7. Orthologous to human NDUFV2 (NADH:ubiquinone oxidoreductase core subunit V2).

NR:

description
NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial

GO:

id name namespace
GO:0006120 mitochondrial electron transport, NADH to ubiquinone biological_process
GO:0005747 mitochondrial respiratory chain complex I cellular_component
GO:0008137 NADH dehydrogenase (ubiquinone) activity molecular_function
GO:0046872 metal ion binding molecular_function
GO:0009055 electron transfer activity molecular_function
GO:0051537 2 iron, 2 sulfur cluster binding molecular_function

KEGG:

id description
K03943 NDUFV2; NADH dehydrogenase (ubiquinone) flavoprotein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043233552.1 True 926 mRNA 0.51 8 471853 477482

Neighbor

gene id symbol gene type direction distance location
rab12 rab12,LOC107687899,LOC107696134,LOC107750912,LOC107754587 coding upstream 219961 244409 ~ 251892 (+)
LOC122335699 piezo2,LOC107687923,LOC107750931,LOC107696634,LOC107569629 coding upstream 235329 158203 ~ 236524 (+)
ranbp3b ranbp3b,ranbp3,LOC107750915,LOC107754592,LOC107552724 coding upstream 377988 75122 ~ 93865 (+)
LOC122335659 LOC107596237,LOC107754594,LOC107687905 coding upstream 424378 41070 ~ 47475 (+)
ankrd12 ankrd12,LOC107750907,LOC107754582,LOC107569631,LOC107696110 coding downstream 3026 480508 ~ 526288 (+)
twsg1a twsg1,twsg1a,LOC107569636,LOC107750930,LOC107596295 coding downstream 50011 527493 ~ 539618 (+)
rnf126 rnf126,LOC107569633,LOC107596227,LOC107754583,LOC107750906 coding downstream 63907 541389 ~ 550642 (+)
LOC122335697 LOC107696097,LOC107750929,LOC107596267,LOC107569625,LOC107754601,LOC104948982 coding downstream 76602 554084 ~ 612109 (+)
zmp:0000000521 zmp:0000000521,LOC107696078,LOC107596226,LOC108442439,LOC108280721,LOC105888700 coding downstream 175259 652741 ~ 661904 (+)
G190184 NA non-coding upstream 14258 435015 ~ 457595 (+)
G190168 NA non-coding upstream 40065 294272 ~ 431788 (+)
G190181 NA non-coding upstream 96213 372953 ~ 375640 (+)
G190162 NA non-coding upstream 173022 191506 ~ 298831 (+)
LOC122335680 NA non-coding upstream 206917 264053 ~ 264936 (+)
G190286 NA non-coding downstream 137724 615206 ~ 618727 (+)
G190288 NA non-coding downstream 141477 618959 ~ 619543 (+)
G190296 NA non-coding downstream 164954 642436 ~ 644346 (+)
G190298 NA non-coding downstream 167677 645159 ~ 645386 (+)
G190300 NA non-coding downstream 168373 645855 ~ 646263 (+)
G190175 mtcl1,LOC107596231,LOC107569627,LOC107754603,LOC107696625 other upstream 124699 338941 ~ 347154 (+)
LOC122335676 rab8a,LOC107687930,LOC107696202 other upstream 451480 13786 ~ 20373 (+)
sirt6 sirt6,LOC107600234,LOC107696599,LOC107596265,LOC107667852 other downstream 339851 817333 ~ 836678 (+)
rab31 rab31,LOC107667863,LOC107696047,LOC107750901 other downstream 428780 906262 ~ 914067 (+)
chico chico,LOC107558286,LOC107696010,LOC107667856,LOC107600187,LOC107713638 other downstream 530668 1008150 ~ 1022881 (+)

Expression


Co-expression Network