G190181


Basic Information

Item Value
gene id G190181
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025048446.1
NCBI id JAEQBD010000791.1
chromosome length 1202875
location 372953 ~ 375640 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU282192
aaatatatatctttatttgcaCTTCATTAGTTTAAGAATGCCACAAGTTATAAATACCACAAAACTGCTTAAACATGCCAAACTGTTTGAGATAactaataattgtattattcgTACAAAGTACTCTTCTGTTTTGCAGCGTAATGAGGATCcgtgtggttttttttgtttttgtaatgcaGTAAATACCGTCCGGCCGAGAGACGAAACCAAGACTAAGGCTATTCTGTACAAAATGAAGCTTCATAAAGGCAACACGTATTGCTACTAGAACAAAGAAACCCTACAGAGTTCAGAGAGTTTGTTCGGTTGAACTTTTCCAAGACAAATGAAGTTTCAACGGACAGTCTTTCTTAAGAACAGGTCAGACTTACCAAgcttcaaactaaataaaacgaATTTAAAAAGGCCAAAGGTTTGAGAAAATGCGCTCAGAAATGTAAATTGGGGTGTTTTgctgtaaagaaaataaagaaataaaaattaatctgaCTCCAGGTTCAGAAGAAATTCAACTgccatccaaaataaatttgcaataaaacatttgccaAAAGGAAAGTAAAAAGCACTTGGTGAAAAGGAGTATCTGATAAGGTTTCCCCTTCTTGAGGTTAGTACGCTTTCCCTAAAACACTGTTAACACGTAATGGACAGCTTTTAGGTTGGTTATAAGTCTTCCGAGGACACAGAGTTCAAAGAAGTtaaatctgaaaattaaaacggagttagaagaagaataaaacgcaaaaaaaagctgttttcacCTCAGCGACAGTCAAACATTAGTCCCTCAAAAAACAGACACGACGTTGGTTATTAAATACTACACTGGTTTCAGACGAGAATATTAATCCGTTACAAACAACATGAACACACCGCCACTACACACGTAAATCTTCTCTCTATTATTTCACATATGCTGAATCTCATTACACCTGTCCAAAATAAAGGTAACCCCAagaccaaaaatgtatttatatttttatatatatatatattataccatatttttttccccttttttatgactttatttttgtgaaaattaagCATATTATCACCCATTTCACTGCGATGAGcgagaaaaatatgcattagacatttttttttttttgaaaggaaaAATTTAGTAATATCCGTTGCACTGATAtcgattaaaaatgtttttctccacaTTACACCAATTGCAACGGAAAGGAGTACTTCATTGTCGTAGAAACATTGGAGAGGGAAACGATGTAAGCAATATTGTTCTCGATCTTGTCAAAAATGACCTTGACATGTTTTCACGAAATTCTcccaattaaaattttttttttcttttttttccctctagaTGTCCTTCCAGACACTCATTAACACTATCAGTCCTCTATagtgtttataaaaaatgcatcatattCCCACGAACTCGCACAAAAACCTGTTGCTACTGCATATCTGATTCAGCTGAAACAACCGTTCCCATCAAACACCTGTTATGTTTTACTATACAACACAGCTATTTAATAATTCCTAGAGTCCTTCATCTAACGCAGGCAAAGTTTTAACTTTCTAGTACCAAAACCGATGTcccttttttagttttaatccGCTCTCCACATAGAAACAGGCCTTTCGCTGAGAGCATTTCATCCTGCAATCCAGATCTAGCGAATAAAACACCCAATTATTGACCTTCCTTTATTCTACTCGAGTTAAACGACACCGAAAAGAGGACTAGGAAGCAACGAAACTCTGCTAAATAATAAGGCTAATCTTCTGTACACAGGTCCTTCGCTAACGTTCAGCATTTCGGCTGTTCGTAAACTAGCTACGAATGGGATTGTAGTGCAAAACACAACAGATAACACGAAATCcacctcaaaaaaaataaaacattaacactgATAGAACGTAAGGCGTAAAGACAACCCAACCACGCCGGCCAATAGGCCACTCCTCTTAAACACAGCCGATAGAAATTAACGCACATCCACTTGGCTTCAAATGCCAAAACAATTCAGAAAGAAGCTTTCCAATTTGAGACCGGGAACGTTTTCCTGTAAGAAATCGAGGGTAGAGTATCCGTCGTCCGGTAGAAACGGAAGCGTCTTACTTCTATGATTTTGTAAACTACATATAAATAGGAATCGATGGGTTTGCACTCATTTCATGCATGTGATGCTTTTCCCATCAGGAAGGCACATGTCGTACAAACGCAATCCTGTGCTTCCCAGAAACGAGGTAGTGTTATGCACGGGAAATAACGGGAAATGAACGCATCTACGCGTGGGAGAGATGACGCGGatgttctttattggcatctggAGGTACCGAAATGCCAAGCGTGTTAAATTGCGCAGTCTGTGGTTTGTGAGGGACGATTATATTGAGCGCTTTTCATCTTCTCTGGTGACGACAGGCCGCCCATCTCATCGTCCGCGTTTGGCCCGGTCGTCTGAAACGGCGTGTGTTCGGGTTTTAAGAGAGGAGGCGGCGTTGGGTTTCTAAATGAAGCGCGAAGCGAGTCTCAACAGCAGCGCATGCGAGGCGGAGGCAGCTCCGGTGGGATTTCGGGTTCGGGCTGAAGGGACAGGATGCTGTTGGACAGCTCTTTGCTGGGGACTTCAAGAGGCATCT
>TU282193
aaatatatatctttatttgcaCTTCATTAGTTTAAGAATGCCACAAGTTATAAATACCACAAAACTGCTTAAACATGCCAAACTGTTTGAGATAactaataattgtattattcgTACAAAGTACTCTTCTGTTTTGCAGCGTAATGAGGATCcgtgtggttttttttgtttttgtaatgcaGTAAATACCGTCCGGCCGAGAGACGAAACCAAGACTAAGGCTATTCTGTACAAAATGAAGCTTCATAAAGGCAACACGTATTGCTACTAGAACAAAGAAACCCTACAGAGTTCAGAGAGTTTGTTCGGTTGAACTTTTCCAAGACAAATGAAGTTTCAACGGACAGTCTTTCTTAAGAACAGGTCAGACTTACCAAgcttcaaactaaataaaacgaATTTAAAAAGGCCAAAGGTTTGAGAAAATGCGCTCAGAAATGTAAATTGGGGTGTTTTgctgtaaagaaaataaagaaataaaaattaatctgaCTCCAGGTTCAGAAGAAATTCAACTgccatccaaaataaatttgcaataaaacatttgccaAAAGGAAAGTAAAAAGCACTTGGTGAAAAGGAGTATCTGATAAGGTTTCCCCTTCTTGAGGTTAGTACGCTTTCCCTAAAACACTGTTAACACGTAATGGACAGCTTTTAGGTTGGTTATAAGTCTTCCGAGGACACAGAGTTCAAAGAAGTtaaatctgaaaattaaaacggagttagaagaagaataaaacgcaaaaaaaagctgttttcacCTCAGCGACAGTCAAACATTAGTCCCTCAAAAAACAGACACGACGTTGGTTATTAAATACTACACTGGTTTCAGACGAGAATATTAATCCGTTACAAACAACATGAACACACCGCCACTACACACGTAAATCTTCTCTCTATTATTTCACATATGCTGAATCTCATTACACCTGTCCAAAATAAAGGTAACCCCAagaccaaaaatgtatttatatttttatatatatatatatattataccatatttttttccccttttttatgactttatttttgtgaaaattaagCATATTATCACCCATTTCACTGCGATGAGcgagaaaaatatgcattagacatttttttttttttgaaaggaaaAATTTAGTAATATCCGTTGCACTGATAtcgattaaaaatgtttttctccacaTTACACCAATTGCAACGGAAAGGAGTACTTCATTGTCGTAGAAACATTGGAGAGGGAAACGATGTAAGCAATATTGTTCTCGATCTTGTCAAAAATGACCTTGACATGTTTTCACGAAATTCTcccaattaaaattttttttttcttttttttccctctagaTGTCCTTCCAGACACTCATTAACACTATCAGTCCTCTATagtgtttataaaaaatgcatcatattCCCACGAACTCGCACAAAAACCTGTTGCTACTGCATATCTGATTCAGCTGAAACAACCGTTCCCATCAAACACCTGTTATGTTTTACTATACAACACAGCTATTTAATAATTCCTAGAGTCCTTCATCTAACGCAGGCAAAGTTTTAACTTTCTAGTACCAAAACCGATGTcccttttttagttttaatccGCTCTCCACATAGAAACAGGCCTTTCGCTGAGAGCATTTCATCCTGCAATCCAGATCTAGCGAATAAAACACCCAATTATTGACCTTCCTTTATTCTACTCGAGTTAAACGACACCGAAAAGAGGACTAGGAAGCAACGAAACTCTGCTAAATAATAAGGCTAATCTTCTGTACACAGGTCCTTCGCTAACGTTCAGCATTTCGGCTGTTCGTAAACTAGCTACGAATGGGATTGTAGTGCAAAACACAACAGATAACACGAAATCcacctcaaaaaaaataaaacattaacactgATAGAACGTAAGGCGTAAAGACAACCCAACCACGCCGGCCAATAGGCCACTCCTCTTAAACACAGCCGATAGAAATTAACGCACATCCACTTGGCTTCAAATGCCAAAACAATTCAGAAAGAAGCTTTCCAATTTGAGACCGGGAACGTTTTCCTGTAAGAAATCGAGGGTAGAGTATCCGTCGTCCGGTAGAAACGGAAGCGTCTTACTTCTATGATTTTGTAAACTACATATAAATAGGAATCGATGGGTTTGCACTCATTTCATGCATGTGATGCTTTTCCCATCAGGAAGGCACATGTCGTACAAACGCAATCCTGTGCTTCCCAGAAACGAGGTAGTGTTATGCACGGGAAATAACGGGAAATGAACGCATCTACGCGTGGGAGAGATGACGCGGatgttctttattggcatctggAGGTACCGAAATGCCAAGCGTGTTAAATTGCGCAGTCTGTGGTTTGTGAGGGACGATTATATTGAGCGCTTTTCATCTTCTCTGGTGACGACAGGCCGCCCATCTCATCGTCCGCGTTTGGCCCGGTCGTCTGAAACGGCGTGTGTTCGGGTTTTAAGAGAGGAGGCGGCGTTGGGTTTCTAAATGAAGCGCGAAGCGAGTCTCAACAGCAGCGCATGCGAGGCGGAGGCAGCTCCGGTGGGATTTCGGGTTCGGGCTGAAGGGACAGGATGCTGTTGGACAGCTCTTTGCTGGGGACTTCAAGAGGCATCT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU282192 False 2625 lncRNA 0.39 2 372953 375640
TU282193 True 2627 lncRNA 0.39 2 372953 375640

Neighbor

gene id symbol gene type direction distance location
rab12 rab12,LOC107687899,LOC107696134,LOC107750912,LOC107754587 coding upstream 121061 244409 ~ 251892 (+)
LOC122335699 piezo2,LOC107687923,LOC107750931,LOC107696634,LOC107569629 coding upstream 136429 158203 ~ 236524 (+)
ranbp3b ranbp3b,ranbp3,LOC107750915,LOC107754592,LOC107552724 coding upstream 279088 75122 ~ 93865 (+)
LOC122335659 LOC107596237,LOC107754594,LOC107687905 coding upstream 325478 41070 ~ 47475 (+)
ndufv2 ndufv2,LOC107696125,LOC107750909,LOC107569634,LOC107596229,LOC107754586,LOC107687898 coding downstream 96213 471853 ~ 477482 (+)
ankrd12 ankrd12,LOC107750907,LOC107754582,LOC107569631,LOC107696110 coding downstream 104868 480508 ~ 526288 (+)
twsg1a twsg1,twsg1a,LOC107569636,LOC107750930,LOC107596295 coding downstream 151853 527493 ~ 539618 (+)
rnf126 rnf126,LOC107569633,LOC107596227,LOC107754583,LOC107750906 coding downstream 165749 541389 ~ 550642 (+)
LOC122335697 LOC107696097,LOC107750929,LOC107596267,LOC107569625,LOC107754601,LOC104948982 coding downstream 178444 554084 ~ 612109 (+)
G190162 NA non-coding upstream 74122 191506 ~ 298831 (+)
LOC122335680 NA non-coding upstream 108017 264053 ~ 264936 (+)
G190164 NA non-coding upstream 130581 239480 ~ 242372 (+)
G190118 abhd8a,LOC107750932,LOC107575227,LOC107696148,LOC107754588,LOC107596234,LOC107687901 non-coding upstream 233076 137144 ~ 139877 (+)
LOC122335677 NA non-coding upstream 344090 25608 ~ 28863 (+)
G190184 NA non-coding downstream 59375 435015 ~ 457595 (+)
G190286 NA non-coding downstream 239566 615206 ~ 618727 (+)
G190288 NA non-coding downstream 243319 618959 ~ 619543 (+)
G190296 NA non-coding downstream 266796 642436 ~ 644346 (+)
G190298 NA non-coding downstream 269519 645159 ~ 645386 (+)
G190175 mtcl1,LOC107596231,LOC107569627,LOC107754603,LOC107696625 other upstream 25799 338941 ~ 347154 (+)
LOC122335676 rab8a,LOC107687930,LOC107696202 other upstream 352580 13786 ~ 20373 (+)
sirt6 sirt6,LOC107600234,LOC107696599,LOC107596265,LOC107667852 other downstream 441693 817333 ~ 836678 (+)
rab31 rab31,LOC107667863,LOC107696047,LOC107750901 other downstream 530622 906262 ~ 914067 (+)
chico chico,LOC107558286,LOC107696010,LOC107667856,LOC107600187,LOC107713638 other downstream 632510 1008150 ~ 1022881 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_015959 NA non-coding NC_007113.7 CM002886.2 54425088 ~ 54427938 (+)