G190296


Basic Information

Item Value
gene id G190296
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025048446.1
NCBI id JAEQBD010000791.1
chromosome length 1202875
location 642436 ~ 644346 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU282377
AGAGTCTCTGTGGAGGAAAAAGCTCATTGCTTTCTCTGAATTCACTTTTGACGTCATTAATGCATCAGCGCCTCAATGGttccttttccagatcagatggtggatcagcacccagagatgaccCTTAtcggagaccagaacacctagatgtgaCCAGATGACCagaaccaaacacacacacactataaatcCTTTACGCAATCTCACATAGACgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU282377 True 215 lncRNA 0.45 2 642436 644346

Neighbor

gene id symbol gene type direction distance location
LOC122335697 LOC107696097,LOC107750929,LOC107596267,LOC107569625,LOC107754601,LOC104948982 coding upstream 30327 554084 ~ 612109 (+)
rnf126 rnf126,LOC107569633,LOC107596227,LOC107754583,LOC107750906 coding upstream 91794 541389 ~ 550642 (+)
twsg1a twsg1,twsg1a,LOC107569636,LOC107750930,LOC107596295 coding upstream 102818 527493 ~ 539618 (+)
ankrd12 ankrd12,LOC107750907,LOC107754582,LOC107569631,LOC107696110 coding upstream 116148 480508 ~ 526288 (+)
ndufv2 ndufv2,LOC107696125,LOC107750909,LOC107569634,LOC107596229,LOC107754586,LOC107687898 coding upstream 164954 471853 ~ 477482 (+)
zmp:0000000521 zmp:0000000521,LOC107696078,LOC107596226,LOC108442439,LOC108280721,LOC105888700 coding downstream 8395 652741 ~ 661904 (+)
hsd11b1lb LOC107596225,LOC107729988,LOC107667865,LOC107750927 coding downstream 18272 662618 ~ 668191 (+)
ralbp1 ralbp1,LOC107696059,LOC107667860 coding downstream 249782 894128 ~ 907048 (+)
LOC122335651 LOC568754,LOC107558277,LOC107667866,LOC107600185,LOC107729992,LOC107750900,LOC107696035,LOC108427118 coding downstream 276611 920957 ~ 928189 (+)
gna11b gna11b,LOC103033252,LOC107600186,LOC108427217,LOC107667855,LOC107696027,LOC108280682,LOC107558284,LOC105889474,LOC107750923 coding downstream 330227 974573 ~ 1007421 (+)
G190288 NA non-coding upstream 22893 618959 ~ 619543 (+)
G190286 NA non-coding upstream 23709 615206 ~ 618727 (+)
G190184 NA non-coding upstream 184841 435015 ~ 457595 (+)
G190168 NA non-coding upstream 210648 294272 ~ 431788 (+)
G190181 NA non-coding upstream 266796 372953 ~ 375640 (+)
G190298 NA non-coding downstream 813 645159 ~ 645386 (+)
G190300 NA non-coding downstream 1509 645855 ~ 646263 (+)
G190302 NA non-coding downstream 3873 648219 ~ 648493 (+)
G190311 NA non-coding downstream 32277 676623 ~ 681427 (+)
G190314 LOC107569623,LOC107696073,LOC107750904,LOC108280171,LOC108444550,LOC107667861 non-coding downstream 59190 703536 ~ 709464 (+)
G190175 mtcl1,LOC107596231,LOC107569627,LOC107754603,LOC107696625 other upstream 295282 338941 ~ 347154 (+)
LOC122335676 rab8a,LOC107687930,LOC107696202 other upstream 622063 13786 ~ 20373 (+)
sirt6 sirt6,LOC107600234,LOC107696599,LOC107596265,LOC107667852 other downstream 172987 817333 ~ 836678 (+)
rab31 rab31,LOC107667863,LOC107696047,LOC107750901 other downstream 261916 906262 ~ 914067 (+)
chico chico,LOC107558286,LOC107696010,LOC107667856,LOC107600187,LOC107713638 other downstream 363804 1008150 ~ 1022881 (+)

Expression


Co-expression Network