G190314 (LOC107569623,LOC107696073,LOC107750904,LOC108280171,LOC108444550,LOC107667861)


Basic Information

Item Value
gene id G190314
gene name LOC107569623,LOC107696073,LOC107750904,LOC108280171,LOC108444550,LOC107667861
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025048446.1
NCBI id JAEQBD010000791.1
chromosome length 1202875
location 703536 ~ 709464 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU282405
ACGGCGCAAAGGCACACAGTGTTTGATTCTTTAGAGACGTGTGCTCACCGCGTGCGTGTAAGTACTGTAGGTGCTGCTGTAGGTGCTGAACGGCAGGGCCACGGTGGGGTTGAAGATGCCAAACTGGCCGACCATCTGTTGCATGCGGCGGATGGTCCTCTCTTTATCAGTGTCAGCGAACTTTACCACCAAACTCGACGAAGCCCCAGGCATGGTCTGACTCCCGTGCAGCCCGCTGATGGCAGACTGAGCCTCGGTGTGTGTCGAAAACTTTACAAAGGCACaacctg

Function

NR:

description
PREDICTED: CUGBP Elav-like family member 5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU282405 True 290 lncRNA 0.56 2 703536 709464

Neighbor

gene id symbol gene type direction distance location
hsd11b1lb LOC107596225,LOC107729988,LOC107667865,LOC107750927 coding upstream 35345 662618 ~ 668191 (+)
zmp:0000000521 zmp:0000000521,LOC107696078,LOC107596226,LOC108442439,LOC108280721,LOC105888700 coding upstream 41632 652741 ~ 661904 (+)
LOC122335697 LOC107696097,LOC107750929,LOC107596267,LOC107569625,LOC107754601,LOC104948982 coding upstream 91427 554084 ~ 612109 (+)
rnf126 rnf126,LOC107569633,LOC107596227,LOC107754583,LOC107750906 coding upstream 152894 541389 ~ 550642 (+)
twsg1a twsg1,twsg1a,LOC107569636,LOC107750930,LOC107596295 coding upstream 163918 527493 ~ 539618 (+)
ralbp1 ralbp1,LOC107696059,LOC107667860 coding downstream 184664 894128 ~ 907048 (+)
LOC122335651 LOC568754,LOC107558277,LOC107667866,LOC107600185,LOC107729992,LOC107750900,LOC107696035,LOC108427118 coding downstream 211493 920957 ~ 928189 (+)
gna11b gna11b,LOC103033252,LOC107600186,LOC108427217,LOC107667855,LOC107696027,LOC108280682,LOC107558284,LOC105889474,LOC107750923 coding downstream 265109 974573 ~ 1007421 (+)
tle2c zgc:136336,LOC107713694,LOC107729985,LOC107558285,LOC107600240 coding downstream 317425 1026889 ~ 1046964 (+)
scn12aa scn12aa,LOC107655859,LOC108427209,LOC107713684 coding downstream 414620 1124084 ~ 1175611 (+)
G190311 NA non-coding upstream 22109 676623 ~ 681427 (+)
G190302 NA non-coding upstream 55043 648219 ~ 648493 (+)
G190300 NA non-coding upstream 57273 645855 ~ 646263 (+)
G190298 NA non-coding upstream 58150 645159 ~ 645386 (+)
G190296 NA non-coding upstream 59190 642436 ~ 644346 (+)
LOC122335698 NA non-coding downstream 136476 845940 ~ 852752 (+)
G190350 NA non-coding downstream 149846 859310 ~ 859534 (+)
G190353 rxfp3.2a,LOC107729970,LOC107600262,LOC107696777,LOC107750939,LOC107667854,LOC107558276 non-coding downstream 152951 862415 ~ 864963 (+)
LOC122335692 NA non-coding downstream 227554 937018 ~ 945525 (+)
G190366 NA non-coding downstream 264797 974261 ~ 1104473 (+)
G190175 mtcl1,LOC107596231,LOC107569627,LOC107754603,LOC107696625 other upstream 356382 338941 ~ 347154 (+)
LOC122335676 rab8a,LOC107687930,LOC107696202 other upstream 683163 13786 ~ 20373 (+)
sirt6 sirt6,LOC107600234,LOC107696599,LOC107596265,LOC107667852 other downstream 107869 817333 ~ 836678 (+)
rab31 rab31,LOC107667863,LOC107696047,LOC107750901 other downstream 196798 906262 ~ 914067 (+)
chico chico,LOC107558286,LOC107696010,LOC107667856,LOC107600187,LOC107713638 other downstream 298686 1008150 ~ 1022881 (+)

Expression


Co-expression Network