CI01000004_07606787_07617579 (MYH6, MYH7, MYH6.S)


Basic Information

Item Value
gene id CI01000004_07606787_07617579
gene name MYH6, MYH7, MYH6.S
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 7606698 ~ 7617579 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_07606787_07617579.mRNA
ATGGGGGACGCTCAGATGGCAGAGTTTGGACCAGCGGCTTCTTACCTACGGAAGTCAGAACGAGAGCGTCTGGAAGCACAAACTCGTCCCTTTGATATGAAAAAGGAGTGTTTTGTGCCTGATCCAGATGAAGAGTTTGTGAAAGCTTCAATTATCAGCCGTGAAGGTGACAAAGTCACTGTACAAACTGAGAAAAACAAGACTGTCACTGTAAAGGAAGCTGACGTCCATCCTCAGAACCCACCAAAGTTTGATAAAATTGAAGACATGGCAATGTTCACCTTTCTTCATGAGCCTGCCGTGCTGTTTAACCTCAAAGAGCGCTATGCAGCATGGATGATCTATACGTACTCAGGGCTGTTCTGTGTCACCGTCAACCCTTACAAGTGGCTGCCAGTGTACAATCAGGAGGTGGTTATAGCCTATAGAGGGAAGAAGAGGAGTGAAGCTCCTCCCCACATCTTTTCCATCTCTGATAACGCCTACCAGTACATGCTAACAGGTATGGACAAAGCCACAAATCTGTTCTGCTCTGCAGATCTGAAAATTATTGTTCTATGTTACTGTAGTGGAGAATCTGGTGCAGGAAAGACTGTAAACACGAAGAGAGTCATTCAATATTTTGCAAGTATTGCAGCTGGGGGCTCAGCAAAGAAAGATGGGTCAGAAAAAAAGGGAACCCTGGAGGATCAAATCATCCAGGCTAACCCTGCTTTGGAAGCGTTTGGCAATGCAAAGACCATCAGAAATGACAACTCCTCAAGATTTGGAAAATTTATCCGAATTCATTTTGGTGCCAGCGGAAAGCTGGCCTCTGCTGACATTGAGACATATCTTCTGGAAAAGTCAAGGGTCACTTTTCAGCTTAAAGCTGAAAGGGACTATCACATTTTCTACCAAATCCTCTCTCAGCAGAAACCTGAGCTGCTGGAGATGCTGCTCATCACCAATAACCCCTATGACTACGCTTTCATCTCCCAAGGCGAAACAACCGTAGCCTCAATTAATGATGGAGAAGAACTACTTGCCACTGATGAAGCATTTGATGTACTAGGCTTCACTCAGGAGGAGAAAAATGGCATCTATAAACTGACTGGAGCCATTATGCACTATGGCAATATGAAGTTTAAACAAAAGCAGAGGGAGGAGCAAGCAGAAGCTGATGGGACTGAAGATGCAGACAAAGTTGCATATCTGATGGGCCTAAACTCTGCTGACTTAATCAAGGGTCTGTGCCATCCAAGAGTGAAAGTAGGAAATGAGTGGGTCACCAAAGGCCAAAATGTCCAGCAGGTGTACTATGCTATTGGTGCACTGTCCAAGGCAGTGTATGAAAAGATGTTCCTTTGGATGGTTGTAAGGATCAATCAGTCTCTGGATACCAGACAACCTCGCCAGTACTTCATTGGAGTTCTGGACATTGCTGGCTTTGAGATCTTTGATTTCAACACCTTTGAGCAACTCTGCATTAACTTTACCAACGAGAAACTGCAACAGTTTTTCAACCACCACATGTTTGTGCTTGAACAAGAGGAGTATAAGAAAGAAGGGATCGAATGGGAGTTCATTGACTTTGGCATGGACTTACAGGCCTGCATCGATCTCATTGAGAAACCTATGGGCATCATGTCAATCCTTGAAGAGGAATGCATGTTTCCCAAAGCCAGTGATGCAACATTTAAAGCAAAGCTTTATGACAACCACCTTGGGAAATCAAACAACTTTCAGAAACCAAGAGCAATCAAAGGAAAGCCAGAGTCTCATTTTTCTCTAATTCATTATGCTGGTACAGTTGACTATAATATTAACAACTGGCTGGTGAAGAACAAAGACCCACTGAATGAGACTGTTGTTGGTCTCTTTCAAAAGTCTACACTCAAGCTCCTGTCAATGCTATTTGCTAATTATGCTGGGTCCGAGTCTGAGGGTGGAAAGGGAGGTAAGGGAGGCGGAAGTAAGAAGAAGGGCTCCTCCTTCCAAACTGTGTCTGCGCTTCACAGGGAAAACTTGAATAAGTTAATGACAAACCTAAGATCAACCCACCCTCATTTTGTGCGCTGCATCATTCCTAATGAGACAAAGACTCCTGGTGCGATGGAGAACCCTTTGGTAATGCACCAACTACGCTGTAACGGTGTACTAGAGGGCATTAGGATTTGCAGGAAGGGCTTCCCCAACAGAATCCTGTATGGGGATTTCAAACAGAGGTACCGAATCCTAAATCCTGCAGCCATACCCGAAGGACAGTTCATAGATAGCAGGAAAGGAGCTGAGAAACTGTTGGGATCACTGGATATTGATCACAATCAATATAAATTTGGACACACAAAGTGGAATGTCCGTGCGTTCATGGGGGTGAAGAATTGGCCCTGGATGAAGCTCTTCTTCAAAATCAAACCTCTACTCAAATCAGCAGAAGCAGAAAAAGAGATGGCAAATATGAAAGATGAATTTGCCAAGCTCAAAGAGGCTTATGCTAAATCAGAAGCACGAAGGAAAGAACTAGAGGAAAAAATGGTGTCTCTTCTCCAAGAGAAGAATGATCTACAGCTTCAAGTCCAAGCGGAGCAAGACAATCTCTGTGATGCAGAGGAGCGATGCGATCAGCTCATCAAAAACAAGATCCAGCTTGAGGCAAAAGCCAAAGAGCTCACAGAGCGGCTTGAGGATGAGGAGGAGATGAACGCAGAGCTGACAGCCAAGAAGAGAAAGTTGGAGGATGAATGCTCTGAGCTGAAGAAAGATATTGATGATCTGGAGCTGACTTTGGCTAAAGTGGAGAAAGAGAAGCATGCTACTGAAAACAAGGTGAAGAACTTGACAGAGGAAATGGCAGCTTTGGACGACATCATCGCAAAGCTAACCAAGGAGAAAAAGGCCTTGCAGGAAGCTCATCAGCAGACACTGGATGACCTGCAAAGTGAGGAGGACAAAGTCAACACCCTCACTAAGGCAAAAGCAAAGCTAGAGCAGCAGGTGGACGATTTGGAAGGATCTCTTGAGCAAGAAAAGAAGATCCGTATGGATCTAGAAAGAGCCAAGAGGAAACTAGAAGGAGACTTGAAGTTAACCCAGGAAAGCTTAATGGACCTGGAGAATGACAAGCAGCAGTTGGAGGAGCGTCTAAAAAAGAAAGACTTTGAGATCAGTCAGCTCAATGGGAAAATTGAGGATGAACAAACTATTTGCATTCAGCTACAGAAAAAACTGAAGGAACTTCAGGCGCGTATTGAAGAGCTGGAGGAAGAGCTTGAGGCAGAAAGAGCTGCCAGAGCCAAGGTGGAGAAACAGAGAGCAGATTTAGCCAGAGAGCTGGAAGAGATCAGTGAGAGACTGGAGGAGGCTGGAGGAGCTACATCTGTTCAGATTGAGATGAATAAGAAACGGGAAACTGAGTTTCAGAAACTTCGCAGAGACCTTGAAGAGGCCACTCTGCAGCATGAGGCCACTGCCGCCACACTGAGAAAGAAACAAGCTGACAGTGTGGCAGATCTGGGAGAGCAAATAGACAATCTGCAAAGAGTCAAGCAAAAACTAGAAAAGGAGAAAAGTGAACTCAAGCTGGAGCTGGATGATGTGGTCTCAAACATGGAACATGTTGTTAAGACAAAGGCAAATCTTGAGAAGACCTGCCGGTCTTTGGAAGATCAAATGAATGAATACAGAACAAAATTTGAGGAGGGTCAGCGCTGTATCAATGACTTCACAATGCAAAAATCTAAGCTACAATCTGAAAATGGTGAACTTTCAAGACAGCTGGAGGAGAAAGACTGTCTTGTCACCCAGCTAACCAGAAGCAAGATGTCTTACACTCAGCAAATTGAAGATCTTAAAAGGCAATTGGAGGAGGAAACTAAGGCTAAGAATGCCCTCGCCCATGCTGTACAGTCAGCCCGGCATGACACAGATCTGCTCAGAGAGCAGTATGAGGAGGAGCAGGAGGCCAAAGCAGAGCTACAGCGCGGCATGTCGAAAGCTAATTCTGAGGTGGCTCAGTGGAGAACCAAGTATGAAACTGATGCCATTCAGAGGACCGAGGAGCTGGAGGAAGCCAAGAAGAAACTGGCTCAACGTTTGCAGGAGGCTGAAGAAGCTGTTGAAGCAGTAAATGCAAAATGTTCTTCTCTTGAAAAGACCAAACACAGACTCCAGAATGAGATTGAAGATCTTATGGTGGACCTGGAGAGGTCTAATGCAGCTGCAGCAGCCTTGGACAAGAAGCAAAGAAACTTTGATAAGGTCCTGGCTGAGTGGAAGCAGAAGTACGAAGAGTCACAGGCTGAGCTAGAGAGCTCTCAAAAGGAAGCCAGATGCCTGAGTACTGAACTTTTTAAGCTGAAGAACTCCTATGAAGAAGCTTTGGATCACCTGGAGACCATGAAGAGAGAAAATAAAAATCTACAAGAGGAGATTTCTGATCTCACTGAGCAACTTGGTGAAGGAGGAAAGAGCATTCATGAGCTGGAGAAAATGAGAAAACAGCTGGAGCAAGAAAAAAGTGAGATTCAGTCTGCTCTGGAAGAAGCAGAGGCCTCATTGGAGCACGAGGAAGGTAAGATTCTGCGAGCTCAGCTAGAGTTCAACCAAATTAAGGCTGATATTGAGCGCAAACTAGCTGAGAAGGATGAAGAGATGGAGCAGAGCAAACGCAATTTGCAGAGGACCATCGACACTCTGCAGAGCTCCTTGGAGTCAGAAACACGAAGCAGGAATGAGGCCCTCAGAATCAAAAAGAAGATGGAAGGGGATCTGAATGAGATGGAGATCCAGCTTAGCCAGGCAAACCGACAAGCAGCAGAGGCTCAAAAACAACTCAAGAGTGTCCAAGCACATCTGAAAGATGCTCAACTTCAGCTGGATGACTCTCTGAGAACAAATGATGATCTCAAGGAGAACATTGCGATCTTAGAGAGACGCAACAACCTTCTGCAAGCTGAACTGGAGGAGCTCAGAGCAGCTCTTGAGCAAACTGAGAGAGGCCGTAAGCTTGCTGAGCAAGAGCTGCTGGATACCAGTGAAAGAGTGCAGCTACTGCACTCCCAGAATACGAGCCTCTTGAATCAGAAGAAGAAGCTTGAGGTTGACACATCCCAGCTTCAAACAGAAGTGGAAGAGGCAGTGCAAGAATGCAGGAATGCTGAAGAAAAAGCCAAGAAGGCCATCACTGATGCTGCCATGATGGCTGAGGAACTGAAGAAGGAGCAAGACACAAGTGCTCACCTGGAGCGTATGAAGAAGAACATGGAGCAGACCATTAAAGATCTGCAGCACCGTCTGGATGAAGCAGAACAAATTGCTATGAAGGGAGGCAAGAAACAAGTTCAGAAACTGGAAGCTCGGGTGAGGGAGTTGGAGAATGAAGTAGAATCAGAACAGAAGAAGAGCAGCGAGGCAGTGAAAGGAATTCGCAAATATGAGAGACGTATTAAAGAACTGACCTACCAGACTGAGGAGGACCGCAAGAATCTGGCTCGTCTGCAAGATCTAGTTGACAAGCTTCAGCTAAAAGTCAAAGCTTACAAGAGGGCTGCAGAGGAAGCTGAGGAACAAGCCAACACAAATCTTAGCAAGTTCCGGAAAATCCAGCATGAACTTGATGAAGCAGAAGAAAGAGCTGACATTGCAGAGTCACAAGTCAATAAACTGCGTGCCAAAAGTCGTGATGTTGGTTCTAAGAAGGGACATGATGAAGAGTAAAGCTCAAATGGACCTTCTGCGTGTCTCCTATATGTTGAATTAGTTATCCACTCAGTCCAGCTCTTTTTTTAGTCACACAGTAGAATAAA

Function

symbol description
myh7 Predicted to enable ATP binding activity; actin filament binding activity; and cytoskeletal motor activity. Acts upstream of or within embryonic heart tube development and ventricular cardiac myofibril assembly. Predicted to be part of myosin complex. Is expressed in several structures, including heart primordium; heart rudiment; mesoderm; musculature system; and pericardial region. Human ortholog(s) of this gene implicated in cardiomyopathy (multiple); congenital heart disease (multiple); distal myopathy 1; heart conduction disease (multiple); and hyaline body myopathy (multiple). Orthologous to human MYH6 (myosin heavy chain 6) and MYH7 (myosin heavy chain 7).
myh6 Predicted to enable ATP binding activity; actin filament binding activity; and cytoskeletal motor activity. Acts upstream of or within heart contraction and heart development. Predicted to be part of myosin complex. Is expressed in cardiac muscle; heart primordium; heart rudiment; and pericardial region. Human ortholog(s) of this gene implicated in atrial heart septal defect (multiple); heart conduction disease (multiple); and intrinsic cardiomyopathy (multiple). Orthologous to human MYH6 (myosin heavy chain 6).

GO:

id name namespace
GO:0055010 ventricular cardiac muscle tissue morphogenesis biological_process

KEGG:

id description
K17751 MYH6_7; myosin heavy chain 6/7

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_07606787_07617579.mRNA True 5786 mRNA 0.45 35 7606698 7617579

Neighbor

gene id symbol gene type direction distance location
CI01000004_07481146_07504328 SLC12A7A coding downstream 102370 7480733 ~ 7504328 (-)
CI01000004_07424499_07454604 COL15A1B coding downstream 152094 7423615 ~ 7454604 (-)
CI01000004_07388945_07408147 TGFR1, TGFBR1, TGFBR1A, TGFBR1B coding downstream 198551 7388461 ~ 7408147 (-)
CI01000004_07331060_07339831 NA coding downstream 266867 7330875 ~ 7339831 (-)
CI01000004_07327597_07330648 NA coding downstream 276050 7327597 ~ 7330648 (-)
CI01000004_07621014_07632760 MYH6, MYH7, VMHC, VMHCL, SMYHC2, SMYHC3 coding upstream 3346 7620925 ~ 7632760 (-)
CI01000004_07646516_07653787 TRNAU1APB coding upstream 28335 7645914 ~ 7653787 (-)
CI01000004_07656773_07666677 ANO8A coding upstream 38612 7656191 ~ 7666677 (-)
CI01000004_07670856_07673369 NA coding upstream 52933 7670512 ~ 7673952 (-)
CI01000004_07693733_07699887 NA coding upstream 75905 7693484 ~ 7699887 (-)
G29575 NA non-coding downstream 52365 7552532 ~ 7554333 (-)
G29568 NA non-coding downstream 76363 7530126 ~ 7530335 (-)
G29343 NA non-coding downstream 218842 7387581 ~ 7387856 (-)
G29334 NA non-coding downstream 219301 7385073 ~ 7387397 (-)
G29511 NA non-coding downstream 283807 7322651 ~ 7322891 (-)
G29598 NA non-coding upstream 48178 7665757 ~ 7665994 (-)
G29551 NA non-coding upstream 142079 7759658 ~ 7761020 (-)
G29544 NA non-coding upstream 157694 7775273 ~ 7780067 (-)
G29542 NA non-coding upstream 180971 7798550 ~ 7800281 (-)
G29556 NA non-coding upstream 182868 7800447 ~ 7800752 (-)
G29388 NA other downstream 974791 6631293 ~ 6631907 (-)
CI01000004_06539836_06541252 NA other downstream 1061126 6538904 ~ 6541252 (-)
CI01000004_05617072_05627369 NA other downstream 1979184 5616644 ~ 5628289 (-)
G27746 NA other downstream 2402974 5178227 ~ 5203724 (-)
G26788 NA other downstream 4330977 3267683 ~ 3275721 (-)
G29656 NA other upstream 346785 7964364 ~ 7965500 (-)
G29746 NA other upstream 736919 8354498 ~ 8358127 (-)
G30316 NA other upstream 1760358 9377937 ~ 9406921 (-)
G31203 NA other upstream 3128858 10746437 ~ 10750641 (-)
CI01000004_11407198_11412220 ADCYAP1B, ADCYAP1 other upstream 3789886 11406957 ~ 11412907 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00011831 smyhc2,LOC107560354,LOC108436074,LOC108436073,LOC102297239,LOC102201055,LOC101483728,LOC103396567 misc CM030138.1 CM030138.1 5707393 ~ 5720981 (-)