CI01000004_15645965_15650241


Basic Information

Item Value
gene id CI01000004_15645965_15650241
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 15645965 ~ 15650274 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_15645965_15650241.mRNA
ATGAGCTTGATCGATGTTGAGTTGGCTGCTGGTGCAATCACAGAGAACTGTCATTCCTTCTCTTCTGGACTTCCTAACCCACCCATCACAATAGCTACACTCTCAGATTTTAGCAAGGTGAATGATGCAATATCTACTCTAAGGAAGAAGCTTGAAGCAGTCTTTAAAGGGGAATGGCTCCGGATCTATCAAGCAGCTAGATCAATGAAGATCCTTCACTGCACAGTGCCCAAAATTAGATCAGAGTTCCTGCACCAGACAACCTCATTCCTCACATCGCAGAGTCTATTTCCCTTCGGTATTTGGTGACATTTAGTATGTTTCAGCAGTACAAACACTCAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_15645965_15650241.mRNA True 342 mRNA 0.44 4 15645965 15650274

Neighbor

gene id symbol gene type direction distance location
CI01000004_15631508_15632389 NA coding upstream 13562 15631430 ~ 15632403 (+)
CI01000004_15444403_15453408 SPPL2, SPPL2B coding upstream 191788 15444403 ~ 15454177 (+)
CI01000004_15400244_15414139 NA coding upstream 231589 15400244 ~ 15414376 (+)
CI01000004_15325044_15326740 NA coding upstream 319178 15325044 ~ 15326787 (+)
CI01000004_15316323_15317231 NA coding upstream 328623 15315947 ~ 15317342 (+)
CI01000004_15687242_15691238 NA coding downstream 34988 15685262 ~ 15691277 (+)
CI01000004_15694735_15698103 SDR39U1 coding downstream 44461 15694735 ~ 15698421 (+)
CI01000004_15711867_15722470 PARP2 coding downstream 61593 15711867 ~ 15722582 (+)
CI01000004_15787382_15803133 NA coding downstream 137108 15787382 ~ 15803144 (+)
CI01000004_15825817_15827475 TEP1 coding downstream 175543 15825817 ~ 15827603 (+)
G33882 NA non-coding upstream 23645 15620079 ~ 15622320 (+)
G33834 NA non-coding upstream 51590 15586066 ~ 15594375 (+)
G34142 NA non-coding upstream 89181 15556405 ~ 15556784 (+)
G34141 NA non-coding upstream 89752 15555855 ~ 15556213 (+)
G34101 NA non-coding upstream 163650 15481920 ~ 15482315 (+)
G34181 NA non-coding downstream 98375 15748649 ~ 15748926 (+)
G34183 NA non-coding downstream 101389 15751663 ~ 15752548 (+)
G34186 NA non-coding downstream 105761 15756035 ~ 15756391 (+)
G34188 NA non-coding downstream 117478 15767752 ~ 15767991 (+)
G34192 NA non-coding downstream 125985 15776259 ~ 15776513 (+)
CI01000004_15091390_15096502 GA45B, GADD45B, GADD45BB other upstream 553996 15091200 ~ 15097173 (+)
CI01000004_14036114_14036449 KIAA0040 other upstream 1609065 14035393 ~ 14039142 (+)
CI01000004_12646972_12652534 NA other upstream 2990254 12646838 ~ 12652570 (+)
G31865 NA other upstream 3450818 12192130 ~ 12197418 (+)
CI01000004_11666900_11667179 NA other upstream 3978306 11666900 ~ 11667659 (+)
G34220 NA other downstream 289083 15939357 ~ 15939950 (+)
G33815 NA other downstream 413141 16063415 ~ 16066464 (+)
G34400 NA other downstream 1327054 16971995 ~ 17025976 (+)

Expression


Co-expression Network